RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 VTA1Q9NP79 307 aa24.14■■□□□ 1.46
MBD3-205ENST00000589064 MRPL11Q9Y3B7 192 aaKnown RBP24.14■■□□□ 1.46
MBD3-205ENST00000589064 FRMPD3Q5JV73 1810 aa24.14■■□□□ 1.45
MBD3-205ENST00000589064 MOXD2PA6NHM9 499 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 CST5P28325 142 aaPredicted RBP24.13■■□□□ 1.45
MBD3-205ENST00000589064 BMP8BP34820 402 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 MDM2Q00987 491 aaPredicted RBP24.13■■□□□ 1.45
MBD3-205ENST00000589064 TLE2Q04725 743 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 C1orf53Q5VUE5 145 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 MTMR8Q96EF0 704 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 LY9Q9HBG7 655 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 GNEQ9Y223 722 aaKnown RBP24.13■■□□□ 1.45
MBD3-205ENST00000589064 LOC102724159A0A0B4J2E5 919 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 CTAGE5O15320 804 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 DYNC1LI2O43237 492 aaPredicted RBP24.13■■□□□ 1.45
MBD3-205ENST00000589064 MCM5P33992 734 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 BEX3Q00994 111 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 PWP2Q15269 919 aaKnown RBP24.13■■□□□ 1.45
MBD3-205ENST00000589064 MCF2L2Q86YR7 1114 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 PCSK9Q8NBP7 692 aaKnown RBP24.13■■□□□ 1.45
MBD3-205ENST00000589064 DNERQ8NFT8 737 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 NUP133Q8WUM0 1156 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 AMNQ9BXJ7 453 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 STARD7Q9NQZ5 370 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 PRKAG2Q9UGJ0 569 aa24.13■■□□□ 1.45
MBD3-205ENST00000589064 ZBTB5O15062 677 aa24.12■■□□□ 1.45
MBD3-205ENST00000589064 PPP1R11O60927 126 aaPredicted RBP24.12■■□□□ 1.45
MBD3-205ENST00000589064 ASGR1P07306 291 aa24.12■■□□□ 1.45
MBD3-205ENST00000589064 PDE4DQ08499 809 aa24.12■■□□□ 1.45
MBD3-205ENST00000589064 SYTL5Q8TDW5 730 aaPredicted RBP24.12■■□□□ 1.45
MBD3-205ENST00000589064 VTI1AQ96AJ9 217 aa24.12■■□□□ 1.45
MBD3-205ENST00000589064 TAAR1Q96RJ0 339 aa24.12■■□□□ 1.45
MBD3-205ENST00000589064 AP5M1Q9H0R1 490 aa24.12■■□□□ 1.45
MBD3-205ENST00000589064 NKX3-2P78367 333 aa24.11■■□□□ 1.45
MBD3-205ENST00000589064 TLK2Q86UE8 772 aa24.11■■□□□ 1.45
MBD3-205ENST00000589064 HOMER1Q86YM7 354 aa24.11■■□□□ 1.45
MBD3-205ENST00000589064 PIGSQ96S52 555 aa24.11■■□□□ 1.45
MBD3-205ENST00000589064 MTA3Q9BTC8 594 aa24.11■■□□□ 1.45
MBD3-205ENST00000589064 UBE2OQ9C0C9 1292 aaKnown RBP24.11■■□□□ 1.45
MBD3-205ENST00000589064 MAF1Q9H063 256 aa24.11■■□□□ 1.45
MBD3-205ENST00000589064 RIOX1Q9H6W3 641 aa24.11■■□□□ 1.45
MBD3-205ENST00000589064 PRDM5Q9NQX1 630 aaPredicted RBP24.11■■□□□ 1.45
MBD3-205ENST00000589064 CYTH3O43739 400 aa24.1■■□□□ 1.45
MBD3-205ENST00000589064 EDNRBP24530 442 aa24.1■■□□□ 1.45
MBD3-205ENST00000589064 NFXL1Q6ZNB6 911 aa24.1■■□□□ 1.45
MBD3-205ENST00000589064 SH3RF1Q7Z6J0 888 aa24.1■■□□□ 1.45
MBD3-205ENST00000589064 TMEM87BQ96K49 555 aa24.1■■□□□ 1.45
MBD3-205ENST00000589064 GLT1D1Q96MS3 346 aa24.1■■□□□ 1.45
MBD3-205ENST00000589064 MPHOSPH6Q99547 160 aaKnown RBP24.1■■□□□ 1.45
MBD3-205ENST00000589064 LBHD1Q9BQE6 289 aaPredicted RBP24.1■■□□□ 1.45
MBD3-205ENST00000589064 MYL10Q9BUA6 226 aa24.1■■□□□ 1.45
MBD3-205ENST00000589064 WDR11Q9BZH6 1224 aa24.1■■□□□ 1.45
MBD3-205ENST00000589064 COL20A1Q9P218 1284 aa24.1■■□□□ 1.45
MBD3-205ENST00000589064 PCDHA1Q9Y5I3 950 aa24.1■■□□□ 1.45
MBD3-205ENST00000589064 A0A1W2PPC1 479 aa24.09■■□□□ 1.45
MBD3-205ENST00000589064 SH2B2O14492 632 aaPredicted RBP24.09■■□□□ 1.45
MBD3-205ENST00000589064 RNF20Q5VTR2 975 aa24.09■■□□□ 1.45
MBD3-205ENST00000589064 ZNF654Q8IZM8 581 aa24.09■■□□□ 1.45
MBD3-205ENST00000589064 TMTC2Q8N394 836 aa24.09■■□□□ 1.45
MBD3-205ENST00000589064 TRIOBPQ9H2D6 2365 aa24.09■■□□□ 1.45
MBD3-205ENST00000589064 RBM47A0AV96 593 aaKnown RBP24.08■■□□□ 1.45
MBD3-205ENST00000589064 B4DLN1 442 aa24.08■■□□□ 1.45
MBD3-205ENST00000589064 PQBP1O60828 265 aaKnown RBP24.08■■□□□ 1.45
MBD3-205ENST00000589064 CFBP00751 764 aa24.08■■□□□ 1.45
MBD3-205ENST00000589064 MRPL12P52815 198 aaKnown RBP24.08■■□□□ 1.45
MBD3-205ENST00000589064 DUSP28Q4G0W2 176 aa24.08■■□□□ 1.45
MBD3-205ENST00000589064 PIBF1Q8WXW3 757 aa24.08■■□□□ 1.45
MBD3-205ENST00000589064 LRRC2Q9BYS8 371 aa24.08■■□□□ 1.45
MBD3-205ENST00000589064 PDLIM7Q9NR12 457 aa24.08■■□□□ 1.45
MBD3-205ENST00000589064 Q9Y3F1 56 aa24.08■■□□□ 1.45
MBD3-205ENST00000589064 ELP1O95163 1332 aa24.08■■□□□ 1.45
MBD3-205ENST00000589064 TRIM43BA6NCK2 446 aa24.07■■□□□ 1.44
MBD3-205ENST00000589064 CCDC69A6NI79 296 aa24.07■■□□□ 1.44
MBD3-205ENST00000589064 OPLAHO14841 1288 aa24.07■■□□□ 1.44
MBD3-205ENST00000589064 FSCN1Q16658 493 aaKnown RBP24.07■■□□□ 1.44
MBD3-205ENST00000589064 TRIM43Q96BQ3 446 aaPredicted RBP24.07■■□□□ 1.44
MBD3-205ENST00000589064 PNMA6FA0A0J9YX94 578 aa24.07■■□□□ 1.44
MBD3-205ENST00000589064 DDAH1O94760 285 aa24.07■■□□□ 1.44
MBD3-205ENST00000589064 CXCL17Q6UXB2 119 aa24.07■■□□□ 1.44
MBD3-205ENST00000589064 RASEFQ8IZ41 740 aa24.07■■□□□ 1.44
MBD3-205ENST00000589064 CTCFLQ8NI51 663 aaPredicted RBP24.07■■□□□ 1.44
MBD3-205ENST00000589064 NSUN6Q8TEA1 469 aaKnown RBP24.07■■□□□ 1.44
MBD3-205ENST00000589064 RMDN3Q96TC7 470 aa24.07■■□□□ 1.44
MBD3-205ENST00000589064 MAP3K14Q99558 947 aa24.07■■□□□ 1.44
MBD3-205ENST00000589064 MCM3APO60318 1980 aa24.06■■□□□ 1.44
MBD3-205ENST00000589064 LIFRP42702 1097 aa24.06■■□□□ 1.44
MBD3-205ENST00000589064 NEK1Q96PY6 1258 aa24.06■■□□□ 1.44
MBD3-205ENST00000589064 DCDC2CA8MYV0 355 aa24.05■■□□□ 1.44
MBD3-205ENST00000589064 ZEB2O60315 1214 aa24.05■■□□□ 1.44
MBD3-205ENST00000589064 CLTBP09497 229 aa24.05■■□□□ 1.44
MBD3-205ENST00000589064 RXRAP19793 462 aa24.05■■□□□ 1.44
MBD3-205ENST00000589064 KIF5BP33176 963 aa24.05■■□□□ 1.44
MBD3-205ENST00000589064 CDK7P50613 346 aa24.05■■□□□ 1.44
MBD3-205ENST00000589064 ARHGEF16Q5VV41 709 aa24.05■■□□□ 1.44
MBD3-205ENST00000589064 ANKRD33Q7Z3H0 272 aa24.05■■□□□ 1.44
MBD3-205ENST00000589064 RAB11FIP4Q86YS3 637 aa24.05■■□□□ 1.44
MBD3-205ENST00000589064 BADQ92934 168 aa24.05■■□□□ 1.44
MBD3-205ENST00000589064 TOX2Q96NM4 488 aa24.05■■□□□ 1.44
MBD3-205ENST00000589064 DNAH12Q6ZR08 3092 aa24.05■■□□□ 1.44
MBD3-205ENST00000589064 A0A0U1RQG5 324 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms