RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.31■□□□□ 0.84
DNMT1-215ENST00000588913 COL20A1Q9P218 1284 aa20.31■□□□□ 0.84
DNMT1-215ENST00000588913 CNTNAP5Q8WYK1 1306 aa20.3■□□□□ 0.84
DNMT1-215ENST00000588913 ZBTB43O43298 467 aa20.3■□□□□ 0.84
DNMT1-215ENST00000588913 SNAI1O95863 264 aaPredicted RBP20.3■□□□□ 0.84
DNMT1-215ENST00000588913 CYBAP13498 195 aa20.3■□□□□ 0.84
DNMT1-215ENST00000588913 ANP32BQ92688 251 aaKnown RBP20.3■□□□□ 0.84
DNMT1-215ENST00000588913 SPZ1Q9BXG8 430 aa20.3■□□□□ 0.84
DNMT1-215ENST00000588913 CYP46A1Q9Y6A2 500 aa20.3■□□□□ 0.84
DNMT1-215ENST00000588913 DTNBO60941 627 aa20.29■□□□□ 0.84
DNMT1-215ENST00000588913 ADD1P35611 737 aaKnown RBP20.29■□□□□ 0.84
DNMT1-215ENST00000588913 DEFB118Q96PH6 123 aa20.29■□□□□ 0.84
DNMT1-215ENST00000588913 TINF2Q9BSI4 451 aa20.29■□□□□ 0.84
DNMT1-215ENST00000588913 RPTORQ8N122 1335 aa20.29■□□□□ 0.84
DNMT1-215ENST00000588913 GOLGA8AA7E2F4 631 aa20.29■□□□□ 0.84
DNMT1-215ENST00000588913 GOLGA8BA8MQT2 603 aa20.29■□□□□ 0.84
DNMT1-215ENST00000588913 PPFIA3O75145 1194 aa20.29■□□□□ 0.84
DNMT1-215ENST00000588913 TRIM44Q96DX7 344 aaPredicted RBP20.29■□□□□ 0.84
DNMT1-215ENST00000588913 NAP1L2Q9ULW6 460 aaPredicted RBP20.29■□□□□ 0.84
DNMT1-215ENST00000588913 DIS3Q9Y2L1 958 aaKnown RBP20.29■□□□□ 0.84
DNMT1-215ENST00000588913 POTEB2H3BUK9 544 aa20.28■□□□□ 0.84
DNMT1-215ENST00000588913 CALM1P0DP23 149 aa20.28■□□□□ 0.84
DNMT1-215ENST00000588913 CALM2P0DP24 149 aa20.28■□□□□ 0.84
DNMT1-215ENST00000588913 CALM3P0DP25 149 aa20.28■□□□□ 0.84
DNMT1-215ENST00000588913 KIF5BP33176 963 aa20.28■□□□□ 0.84
DNMT1-215ENST00000588913 MCM2P49736 904 aa20.28■□□□□ 0.84
DNMT1-215ENST00000588913 EVCP57679 992 aa20.28■□□□□ 0.84
DNMT1-215ENST00000588913 ANAPC15P60006 121 aa20.28■□□□□ 0.84
DNMT1-215ENST00000588913 RPS6P62753 249 aaKnown RBP20.28■□□□□ 0.84
DNMT1-215ENST00000588913 FGD1P98174 961 aa20.28■□□□□ 0.84
DNMT1-215ENST00000588913 RTN1Q16799 776 aa20.28■□□□□ 0.84
DNMT1-215ENST00000588913 ANO1Q5XXA6 986 aa20.28■□□□□ 0.84
DNMT1-215ENST00000588913 TRMT44Q8IYL2 757 aaKnown RBP20.28■□□□□ 0.84
DNMT1-215ENST00000588913 KATNBL1Q9H079 304 aa20.28■□□□□ 0.84
DNMT1-215ENST00000588913 NCOA5Q9HCD5 579 aaKnown RBP20.28■□□□□ 0.84
DNMT1-215ENST00000588913 RRAGDQ9NQL2 400 aaPredicted RBP20.28■□□□□ 0.84
DNMT1-215ENST00000588913 NID2Q14112 1375 aa20.28■□□□□ 0.84
DNMT1-215ENST00000588913 ABCB11O95342 1321 aa20.27■□□□□ 0.84
DNMT1-215ENST00000588913 PTPDC1A2A3K4 754 aa20.27■□□□□ 0.84
DNMT1-215ENST00000588913 GJB1P08034 283 aa20.27■□□□□ 0.84
DNMT1-215ENST00000588913 CALML3P27482 149 aa20.27■□□□□ 0.84
DNMT1-215ENST00000588913 PDIA3P30101 505 aaKnown RBP20.27■□□□□ 0.84
DNMT1-215ENST00000588913 MFSD14CQ5VZR4 134 aa20.27■□□□□ 0.84
DNMT1-215ENST00000588913 LHX8Q68G74 356 aa20.27■□□□□ 0.84
DNMT1-215ENST00000588913 U2AF1L4Q8WU68 220 aaKnown RBP20.27■□□□□ 0.84
DNMT1-215ENST00000588913 AMNQ9BXJ7 453 aa20.27■□□□□ 0.84
DNMT1-215ENST00000588913 HMX1Q9NP08 348 aaPredicted RBP20.27■□□□□ 0.84
DNMT1-215ENST00000588913 PDRG1Q9NUG6 133 aa20.27■□□□□ 0.84
DNMT1-215ENST00000588913 PFASO15067 1338 aa20.27■□□□□ 0.83
DNMT1-215ENST00000588913 PNMA6FA0A0J9YX94 578 aa20.26■□□□□ 0.83
DNMT1-215ENST00000588913 ADCY6O43306 1168 aa20.26■□□□□ 0.83
DNMT1-215ENST00000588913 ZNF865P0CJ78 1059 aaPredicted RBP20.26■□□□□ 0.83
DNMT1-215ENST00000588913 PTGS1P23219 599 aa20.26■□□□□ 0.83
DNMT1-215ENST00000588913 MAMDC4Q6UXC1 1216 aa20.26■□□□□ 0.83
DNMT1-215ENST00000588913 RNF207Q6ZRF8 634 aa20.26■□□□□ 0.83
DNMT1-215ENST00000588913 LENG1Q96BZ8 264 aaPredicted RBP20.26■□□□□ 0.83
DNMT1-215ENST00000588913 PCDHA1Q9Y5I3 950 aa20.26■□□□□ 0.83
DNMT1-215ENST00000588913 GJA8P48165 433 aa20.26■□□□□ 0.83
DNMT1-215ENST00000588913 CCT2P78371 535 aaKnown RBP20.26■□□□□ 0.83
DNMT1-215ENST00000588913 TMEM63BQ5T3F8 832 aa20.26■□□□□ 0.83
DNMT1-215ENST00000588913 TMEM106CQ9BVX2 250 aa20.26■□□□□ 0.83
DNMT1-215ENST00000588913 SMARCA1P28370 1054 aa20.25■□□□□ 0.83
DNMT1-215ENST00000588913 MNX1P50219 401 aaPredicted RBP20.25■□□□□ 0.83
DNMT1-215ENST00000588913 METAP2P50579 478 aaKnown RBP eCLIP20.25■□□□□ 0.83
DNMT1-215ENST00000588913 CCDC173Q0VFZ6 552 aa20.25■□□□□ 0.83
DNMT1-215ENST00000588913 NTRK3Q16288 839 aa20.25■□□□□ 0.83
DNMT1-215ENST00000588913 TYW1BQ6NUM6 668 aa20.25■□□□□ 0.83
DNMT1-215ENST00000588913 SYNE3Q6ZMZ3 975 aa20.25■□□□□ 0.83
DNMT1-215ENST00000588913 ARMCX2Q7L311 632 aa20.25■□□□□ 0.83
DNMT1-215ENST00000588913 SYTL5Q8TDW5 730 aaPredicted RBP20.25■□□□□ 0.83
DNMT1-215ENST00000588913 CRISPLD2Q9H0B8 497 aa20.25■□□□□ 0.83
DNMT1-215ENST00000588913 SLC5A4Q9NY91 659 aa20.25■□□□□ 0.83
DNMT1-215ENST00000588913 BAG4O95429 457 aaKnown RBP20.24■□□□□ 0.83
DNMT1-215ENST00000588913 LARGE1O95461 756 aa20.24■□□□□ 0.83
DNMT1-215ENST00000588913 SGPL1O95470 568 aa20.24■□□□□ 0.83
DNMT1-215ENST00000588913 GNAQP50148 359 aa20.24■□□□□ 0.83
DNMT1-215ENST00000588913 AK2P54819 239 aa20.24■□□□□ 0.83
DNMT1-215ENST00000588913 ZNF467Q7Z7K2 595 aaPredicted RBP20.24■□□□□ 0.83
DNMT1-215ENST00000588913 GPKOWQ92917 476 aaPredicted RBP eCLIP20.24■□□□□ 0.83
DNMT1-215ENST00000588913 TAAR1Q96RJ0 339 aa20.24■□□□□ 0.83
DNMT1-215ENST00000588913 LZTS2Q9BRK4 669 aa20.24■□□□□ 0.83
DNMT1-215ENST00000588913 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.24■□□□□ 0.83
DNMT1-215ENST00000588913 TPCN1Q9ULQ1 816 aa20.24■□□□□ 0.83
DNMT1-215ENST00000588913 HOXA13P31271 388 aaPredicted RBP20.23■□□□□ 0.83
DNMT1-215ENST00000588913 RGS19P49795 217 aa20.23■□□□□ 0.83
DNMT1-215ENST00000588913 ALDH5A1P51649 535 aaPredicted RBP20.23■□□□□ 0.83
DNMT1-215ENST00000588913 RRP36Q96EU6 259 aaKnown RBP20.23■□□□□ 0.83
DNMT1-215ENST00000588913 MRPL11Q9Y3B7 192 aaKnown RBP20.23■□□□□ 0.83
DNMT1-215ENST00000588913 SYNGAP1Q96PV0 1343 aa20.23■□□□□ 0.83
DNMT1-215ENST00000588913 DNAH12Q6ZR08 3092 aa20.23■□□□□ 0.83
DNMT1-215ENST00000588913 ADAMTS3O15072 1205 aa20.23■□□□□ 0.83
DNMT1-215ENST00000588913 CD2BP2O95400 341 aaKnown RBP20.23■□□□□ 0.83
DNMT1-215ENST00000588913 CNGA1P29973 690 aa20.23■□□□□ 0.83
DNMT1-215ENST00000588913 RCAN1P53805 252 aa20.23■□□□□ 0.83
DNMT1-215ENST00000588913 IRX5P78411 483 aaPredicted RBP20.23■□□□□ 0.83
DNMT1-215ENST00000588913 STK3Q13188 491 aa20.23■□□□□ 0.83
DNMT1-215ENST00000588913 NOL8Q76FK4 1167 aaKnown RBP20.23■□□□□ 0.83
DNMT1-215ENST00000588913 DIS3LQ8TF46 1054 aaKnown RBP20.23■□□□□ 0.83
DNMT1-215ENST00000588913 RBM28Q9NW13 759 aaKnown RBP20.23■□□□□ 0.83
DNMT1-215ENST00000588913 CFBP00751 764 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms