RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 ZBED6P86452 979 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 CDK17Q00537 523 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 LRRC63Q05C16 580 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 PDE4DQ08499 809 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 DIXDC1Q155Q3 683 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 IL17AQ16552 155 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 ZNF569Q5MCW4 686 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 KRT79Q5XKE5 535 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 CCDC70Q6NSX1 233 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 UNC13DQ70J99 1090 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 PTF1AQ7RTS3 328 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 CCDC84Q86UT8 332 aaPredicted RBP8.01□□□□□ -1.13
SPIDR-228ENST00000588781 FLAD1Q8NFF5 587 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 TBC1D16Q8TBP0 767 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 CPLX3Q8WVH0 158 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 KIFC2Q96AC6 838 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 EDEM3Q9BZQ6 932 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 TRIM9Q9C026 710 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 ZC3H12CQ9C0D7 883 aaKnown RBP8.01□□□□□ -1.13
SPIDR-228ENST00000588781 NT5C3AQ9H0P0 336 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 NUCKS1Q9H1E3 243 aaKnown RBP8.01□□□□□ -1.13
SPIDR-228ENST00000588781 RIC8AQ9NPQ8 531 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 LUC7LQ9NQ29 371 aaKnown RBP8.01□□□□□ -1.13
SPIDR-228ENST00000588781 STK32BQ9NY57 414 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 FAM53CQ9NYF3 392 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 LRWD1Q9UFC0 647 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.01□□□□□ -1.13
SPIDR-228ENST00000588781 V9GYY5 206 aaPredicted RBP8.01□□□□□ -1.13
SPIDR-228ENST00000588781 SNED1Q8TER0 1413 aa8.01□□□□□ -1.13
SPIDR-228ENST00000588781 DDX60LQ5H9U9 1706 aaKnown RBP8□□□□□ -1.13
SPIDR-228ENST00000588781 CCDC66A2RUB6 948 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 KLRG2A4D1S0 409 aaPredicted RBP8□□□□□ -1.13
SPIDR-228ENST00000588781 CTAGE15A4D2H0 777 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 CCDC151A5D8V7 595 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 WNT7AO00755 349 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 CYTH3O43739 400 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 KLRC4O43908 158 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 USO1O60763 962 aaKnown RBP8□□□□□ -1.13
SPIDR-228ENST00000588781 GNA14O95837 355 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 CTAGE8P0CG41 777 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 SRGNP10124 158 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 GYS1P13807 737 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 NPR1P16066 1061 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 CLCN6P51797 869 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 KCNQ4P56696 695 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 RHBDL3P58872 404 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 FKBP1AP62942 108 aaKnown RBP8□□□□□ -1.13
SPIDR-228ENST00000588781 GOLGA8FQ08AF8 430 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 GOLGA8DPQ0D2H9 430 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 TBC1D8BQ0IIM8 1120 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 TXNRD1Q16881 649 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 MAP9Q49MG5 647 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 NOM1Q5C9Z4 860 aaKnown RBP8□□□□□ -1.13
SPIDR-228ENST00000588781 PPP4R3AQ6IN85 833 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 TTI2Q6NXR4 508 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 HHIPL2Q6UWX4 724 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 RAD9BQ6WBX8 426 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 RSRC2Q7L4I2 434 aaKnown RBP8□□□□□ -1.13
SPIDR-228ENST00000588781 KIAA1328Q86T90 577 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 CTAGE6Q86UF2 777 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 CTAGE4Q8IX94 777 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 SMYD4Q8IYR2 804 aaPredicted RBP8□□□□□ -1.13
SPIDR-228ENST00000588781 GUF1Q8N442 669 aaKnown RBP8□□□□□ -1.13
SPIDR-228ENST00000588781 MSL3Q8N5Y2 521 aaKnown RBP8□□□□□ -1.13
SPIDR-228ENST00000588781 KCTD17Q8N5Z5 321 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 RASGRP4Q8TDF6 673 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 TBCKQ8TEA7 893 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 HNRNPLLQ8WVV9 542 aaKnown RBP8□□□□□ -1.13
SPIDR-228ENST00000588781 STAMQ92783 540 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 CUL5Q93034 780 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 CEP95Q96GE4 821 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 PCMTD1Q96MG8 357 aaPredicted RBP8□□□□□ -1.13
SPIDR-228ENST00000588781 DNAJC7Q99615 494 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 TUBGCP2Q9BSJ2 902 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 MRIQ9BWK5 157 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 TRIM34Q9BYJ4 488 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 ZMYND15Q9H091 742 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 EHD4Q9H223 541 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 TMEM60Q9H2L4 133 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 DHX36Q9H2U1 1008 aaKnown RBP8□□□□□ -1.13
SPIDR-228ENST00000588781 LZTFL1Q9NQ48 299 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 MTMR4Q9NYA4 1195 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 JAG2Q9Y219 1238 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 GDAQ9Y2T3 454 aa8□□□□□ -1.13
SPIDR-228ENST00000588781 EPN1Q9Y6I3 576 aaPredicted RBP8□□□□□ -1.13
SPIDR-228ENST00000588781 IGKV6D-41A0A0C4DH26 115 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 LRRC37AA6NMS7 1700 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 EIF3CLB5ME19 914 aaKnown RBP7.99□□□□□ -1.13
SPIDR-228ENST00000588781 NDUFA10O95299 355 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 SNHG28P0DPA3 235 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 PDHBP11177 359 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 ZSCAN20P17040 1043 aaPredicted RBP7.99□□□□□ -1.13
SPIDR-228ENST00000588781 TRIM21P19474 475 aaKnown RBP7.99□□□□□ -1.13
SPIDR-228ENST00000588781 CASP1P29466 404 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 PDE6BP35913 854 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 FXR1P51114 621 aaKnown RBP eCLIP7.99□□□□□ -1.13
SPIDR-228ENST00000588781 HDLBPQ00341 1268 aaKnown RBP7.99□□□□□ -1.13
SPIDR-228ENST00000588781 NAA30Q147X3 362 aaPredicted RBP7.99□□□□□ -1.13
SPIDR-228ENST00000588781 SPA17Q15506 151 aa7.99□□□□□ -1.13
SPIDR-228ENST00000588781 MEA1Q16626 185 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms