RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 POLR2MP0CAP2 368 aa25.89■■□□□ 1.74
ACTN4-210ENST00000588618 MAP2K2P36507 400 aa25.89■■□□□ 1.74
ACTN4-210ENST00000588618 CLK2P49760 499 aaKnown RBP25.89■■□□□ 1.74
ACTN4-210ENST00000588618 VEGFBP49765 207 aa25.89■■□□□ 1.74
ACTN4-210ENST00000588618 USP17L6PQ6QN14 398 aa25.89■■□□□ 1.74
ACTN4-210ENST00000588618 CHST13Q8NET6 341 aa25.89■■□□□ 1.74
ACTN4-210ENST00000588618 BIN2Q9UBW5 565 aaPredicted RBP25.89■■□□□ 1.74
ACTN4-210ENST00000588618 NFIBO00712 420 aa25.88■■□□□ 1.73
ACTN4-210ENST00000588618 C1QTNF8P60827 252 aa25.88■■□□□ 1.73
ACTN4-210ENST00000588618 MYH7BA7E2Y1 1941 aa25.88■■□□□ 1.73
ACTN4-210ENST00000588618 MCTP2Q6DN12 878 aa25.88■■□□□ 1.73
ACTN4-210ENST00000588618 MOV10L1Q9BXT6 1211 aaKnown RBP25.88■■□□□ 1.73
ACTN4-210ENST00000588618 R3HDMLQ9H3Y0 253 aa25.88■■□□□ 1.73
ACTN4-210ENST00000588618 SPDYE3A6NKU9 549 aa25.87■■□□□ 1.73
ACTN4-210ENST00000588618 HSPA6P17066 643 aa25.87■■□□□ 1.73
ACTN4-210ENST00000588618 DNM1Q05193 864 aaKnown RBP25.87■■□□□ 1.73
ACTN4-210ENST00000588618 FAM110CQ1W6H9 321 aa25.87■■□□□ 1.73
ACTN4-210ENST00000588618 WDR78Q5VTH9 848 aa25.87■■□□□ 1.73
ACTN4-210ENST00000588618 MYSM1Q5VVJ2 828 aa25.87■■□□□ 1.73
ACTN4-210ENST00000588618 JAKMIP3Q5VZ66 844 aa25.87■■□□□ 1.73
ACTN4-210ENST00000588618 NSMFQ6X4W1 530 aa25.87■■□□□ 1.73
ACTN4-210ENST00000588618 KRT25Q7Z3Z0 450 aa25.87■■□□□ 1.73
ACTN4-210ENST00000588618 PGBD1Q96JS3 809 aa25.87■■□□□ 1.73
ACTN4-210ENST00000588618 PIK3CDO00329 1044 aa25.86■■□□□ 1.73
ACTN4-210ENST00000588618 Q3C1V9 767 aa25.86■■□□□ 1.73
ACTN4-210ENST00000588618 PIK3AP1Q6ZUJ8 805 aa25.86■■□□□ 1.73
ACTN4-210ENST00000588618 SAMD3Q8N6K7 520 aa25.86■■□□□ 1.73
ACTN4-210ENST00000588618 FTOQ9C0B1 505 aaKnown RBP eCLIP25.86■■□□□ 1.738e-20■■□□□ 11.6
ACTN4-210ENST00000588618 MAP3K20Q9NYL2 800 aaKnown RBP25.86■■□□□ 1.73
ACTN4-210ENST00000588618 MORF4L1Q9UBU8 362 aa25.86■■□□□ 1.73
ACTN4-210ENST00000588618 LCTP09848 1927 aa25.86■■□□□ 1.73
ACTN4-210ENST00000588618 TLR2O60603 784 aa25.85■■□□□ 1.73
ACTN4-210ENST00000588618 ERCC3P19447 782 aa25.85■■□□□ 1.73
ACTN4-210ENST00000588618 HOXA13P31271 388 aaPredicted RBP25.85■■□□□ 1.73
ACTN4-210ENST00000588618 TOB1P50616 345 aaPredicted RBP25.85■■□□□ 1.73
ACTN4-210ENST00000588618 AP3B2Q13367 1082 aa25.85■■□□□ 1.73
ACTN4-210ENST00000588618 RNF207Q6ZRF8 634 aa25.85■■□□□ 1.73
ACTN4-210ENST00000588618 MROH8Q9H579 483 aa25.85■■□□□ 1.73
ACTN4-210ENST00000588618 CPA4Q9UI42 421 aa25.85■■□□□ 1.73
ACTN4-210ENST00000588618 WNT7AO00755 349 aa25.85■■□□□ 1.73
ACTN4-210ENST00000588618 CA12O43570 354 aa25.85■■□□□ 1.73
ACTN4-210ENST00000588618 BAG4O95429 457 aaKnown RBP25.85■■□□□ 1.73
ACTN4-210ENST00000588618 CRHR2Q13324 411 aa25.85■■□□□ 1.73
ACTN4-210ENST00000588618 ANKRD35Q8N283 1001 aa25.85■■□□□ 1.73
ACTN4-210ENST00000588618 NOL7Q9UMY1 257 aaKnown RBP25.85■■□□□ 1.73
ACTN4-210ENST00000588618 FOSP01100 380 aaPredicted RBP25.84■■□□□ 1.73
ACTN4-210ENST00000588618 NONOQ15233 471 aaKnown RBP eCLIP25.84■■□□□ 1.734e-7■■□□□ 12.5
ACTN4-210ENST00000588618 CLEC17AQ6ZS10 378 aa25.84■■□□□ 1.73
ACTN4-210ENST00000588618 FCHSD1Q86WN1 690 aa25.84■■□□□ 1.73
ACTN4-210ENST00000588618 SHCBP1Q8NEM2 672 aa25.84■■□□□ 1.73
ACTN4-210ENST00000588618 ADGRA2Q96PE1 1338 aa25.84■■□□□ 1.73
ACTN4-210ENST00000588618 CEP350Q5VT06 3117 aa25.84■■□□□ 1.73
ACTN4-210ENST00000588618 NBR1Q14596 966 aa25.83■■□□□ 1.73
ACTN4-210ENST00000588618 MAF1Q9H063 256 aa25.83■■□□□ 1.73
ACTN4-210ENST00000588618 EHMT1Q9H9B1 1298 aa25.83■■□□□ 1.73
ACTN4-210ENST00000588618 EDIL3O43854 480 aa25.83■■□□□ 1.72
ACTN4-210ENST00000588618 HSD17B4P51659 736 aa25.83■■□□□ 1.72
ACTN4-210ENST00000588618 RPS6P62753 249 aaKnown RBP25.83■■□□□ 1.72
ACTN4-210ENST00000588618 GHRHRQ02643 423 aa25.83■■□□□ 1.72
ACTN4-210ENST00000588618 USP28Q96RU2 1077 aa25.83■■□□□ 1.72
ACTN4-210ENST00000588618 TFIP11Q9UBB9 837 aaKnown RBP25.83■■□□□ 1.72
ACTN4-210ENST00000588618 CNPY2Q9Y2B0 182 aa25.83■■□□□ 1.72
ACTN4-210ENST00000588618 PFASO15067 1338 aa25.82■■□□□ 1.72
ACTN4-210ENST00000588618 RILPL1Q5EBL4 403 aa25.82■■□□□ 1.72
ACTN4-210ENST00000588618 ZNF396Q96N95 335 aaPredicted RBP25.82■■□□□ 1.72
ACTN4-210ENST00000588618 COL20A1Q9P218 1284 aa25.82■■□□□ 1.72
ACTN4-210ENST00000588618 NCLP19338 710 aaKnown RBP25.81■■□□□ 1.72
ACTN4-210ENST00000588618 KCTD2Q14681 263 aa25.81■■□□□ 1.72
ACTN4-210ENST00000588618 ANO3Q9BYT9 981 aa25.81■■□□□ 1.72
ACTN4-210ENST00000588618 A1CFQ9NQ94 594 aaKnown RBP25.81■■□□□ 1.72
ACTN4-210ENST00000588618 IVNS1ABPQ9Y6Y0 642 aa25.81■■□□□ 1.72
ACTN4-210ENST00000588618 BCRP11274 1271 aa25.8■■□□□ 1.72
ACTN4-210ENST00000588618 BAATQ14032 418 aaPredicted RBP25.8■■□□□ 1.72
ACTN4-210ENST00000588618 INF2Q27J81 1249 aa25.8■■□□□ 1.72
ACTN4-210ENST00000588618 SLC30A10Q6XR72 485 aa25.8■■□□□ 1.72
ACTN4-210ENST00000588618 PORCNQ9H237 461 aa25.8■■□□□ 1.72
ACTN4-210ENST00000588618 EFCC1Q9HA90 598 aa25.8■■□□□ 1.72
ACTN4-210ENST00000588618 GDPD2Q9HCC8 539 aa25.8■■□□□ 1.72
ACTN4-210ENST00000588618 ZNFX1Q9P2E3 1918 aaKnown RBP25.8■■□□□ 1.72
ACTN4-210ENST00000588618 FCER1AP12319 257 aa25.8■■□□□ 1.72
ACTN4-210ENST00000588618 ATP2B1P20020 1258 aa25.8■■□□□ 1.72
ACTN4-210ENST00000588618 C17orf99Q6UX52 265 aa25.8■■□□□ 1.72
ACTN4-210ENST00000588618 TBCKQ8TEA7 893 aa25.8■■□□□ 1.72
ACTN4-210ENST00000588618 MMP19Q99542 508 aa25.8■■□□□ 1.72
ACTN4-210ENST00000588618 CYP39A1Q9NYL5 469 aa25.8■■□□□ 1.72
ACTN4-210ENST00000588618 CLIC4Q9Y696 253 aa25.8■■□□□ 1.72
ACTN4-210ENST00000588618 MAPK4P31152 587 aa25.79■■□□□ 1.72
ACTN4-210ENST00000588618 TRAPPC10P48553 1259 aa25.79■■□□□ 1.72
ACTN4-210ENST00000588618 KRT85P78386 507 aa25.79■■□□□ 1.72
ACTN4-210ENST00000588618 SYTL5Q8TDW5 730 aaPredicted RBP25.79■■□□□ 1.72
ACTN4-210ENST00000588618 GBP4Q96PP9 640 aa25.79■■□□□ 1.72
ACTN4-210ENST00000588618 CFAP45Q9UL16 551 aa25.79■■□□□ 1.72
ACTN4-210ENST00000588618 CEBPZQ03701 1054 aaKnown RBP25.78■■□□□ 1.72
ACTN4-210ENST00000588618 ATL3Q6DD88 541 aa25.78■■□□□ 1.72
ACTN4-210ENST00000588618 NEK8Q86SG6 692 aa25.78■■□□□ 1.72
ACTN4-210ENST00000588618 PURBQ96QR8 312 aaKnown RBP25.78■■□□□ 1.72
ACTN4-210ENST00000588618 PCDHB6Q9Y5E3 794 aa25.78■■□□□ 1.72
ACTN4-210ENST00000588618 THSD7BQ9C0I4 1608 aa25.78■■□□□ 1.72
ACTN4-210ENST00000588618 CRYGNQ8WXF5 182 aa25.77■■□□□ 1.72
ACTN4-210ENST00000588618 PLXNB2O15031 1838 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms