RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 PROCA1Q8NCQ7 364 aaPredicted RBP17.09■□□□□ 0.33
PTPRS-206ENST00000588552 U2AF1L4Q8WU68 220 aaKnown RBP17.09■□□□□ 0.33
PTPRS-206ENST00000588552 GJA10Q969M2 543 aa17.09■□□□□ 0.33
PTPRS-206ENST00000588552 TDRD3Q9H7E2 651 aaKnown RBP17.09■□□□□ 0.33
PTPRS-206ENST00000588552 FAM204AQ9H8W3 233 aa17.09■□□□□ 0.33
PTPRS-206ENST00000588552 TNNC2P02585 160 aa17.09■□□□□ 0.33
PTPRS-206ENST00000588552 PEX26Q7Z412 305 aa17.09■□□□□ 0.33
PTPRS-206ENST00000588552 ZBTB9Q96C00 473 aa17.09■□□□□ 0.33
PTPRS-206ENST00000588552 ZNF341Q9BYN7 854 aa17.09■□□□□ 0.33
PTPRS-206ENST00000588552 ACTN4O43707 911 aaKnown RBP17.08■□□□□ 0.33
PTPRS-206ENST00000588552 ASNSP08243 561 aa17.08■□□□□ 0.33
PTPRS-206ENST00000588552 DLATP10515 647 aaKnown RBP17.08■□□□□ 0.33
PTPRS-206ENST00000588552 ARL1P40616 181 aaPredicted RBP17.08■□□□□ 0.33
PTPRS-206ENST00000588552 MRPS9P82933 396 aaKnown RBP17.08■□□□□ 0.33
PTPRS-206ENST00000588552 GPR161Q8N6U8 529 aaKnown RBP17.08■□□□□ 0.33
PTPRS-206ENST00000588552 ATRIPQ8WXE1 791 aa17.08■□□□□ 0.33
PTPRS-206ENST00000588552 E7EVH7 732 aa17.08■□□□□ 0.33
PTPRS-206ENST00000588552 CCND2P30279 289 aa17.08■□□□□ 0.33
PTPRS-206ENST00000588552 RPS6KA1Q15418 735 aa17.08■□□□□ 0.33
PTPRS-206ENST00000588552 RNF169Q8NCN4 708 aa17.08■□□□□ 0.33
PTPRS-206ENST00000588552 PSMB7Q99436 277 aa17.08■□□□□ 0.33
PTPRS-206ENST00000588552 CARD6Q9BX69 1037 aa17.08■□□□□ 0.33
PTPRS-206ENST00000588552 MROH7-TTC4A0A0A0MT08 1334 aa17.08■□□□□ 0.33
PTPRS-206ENST00000588552 EN1Q05925 392 aaPredicted RBP17.08■□□□□ 0.32
PTPRS-206ENST00000588552 CCDC127Q96BQ5 260 aa17.08■□□□□ 0.32
PTPRS-206ENST00000588552 DCP1AQ9NPI6 582 aaPredicted RBP17.08■□□□□ 0.32
PTPRS-206ENST00000588552 C1orf112Q9NSG2 853 aa17.08■□□□□ 0.32
PTPRS-206ENST00000588552 UTP11Q9Y3A2 253 aaKnown RBP17.08■□□□□ 0.32
PTPRS-206ENST00000588552 RFX7Q2KHR2 1363 aa17.08■□□□□ 0.32
PTPRS-206ENST00000588552 YARSP54577 528 aaKnown RBP17.08■□□□□ 0.32
PTPRS-206ENST00000588552 TSKSQ9UJT2 592 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 PCDHB6Q9Y5E3 794 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 RESTQ13127 1097 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 SMIM5Q71RC9 77 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 HDXQ7Z353 690 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 SP8Q8IXZ3 490 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 FAM84BQ96KN1 310 aaPredicted RBP17.07■□□□□ 0.32
PTPRS-206ENST00000588552 HSPA1LP34931 641 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 TOB2Q14106 344 aaPredicted RBP17.07■□□□□ 0.32
PTPRS-206ENST00000588552 RABL6Q3YEC7 729 aaPredicted RBP17.07■□□□□ 0.32
PTPRS-206ENST00000588552 TMTC3Q6ZXV5 915 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 CDHR1Q96JP9 859 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 CALCOCO1Q9P1Z2 691 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 ANKFY1Q9P2R3 1169 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 FRMPD1Q5SYB0 1578 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 GAS8O95995 478 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 KIAA1524Q8TCG1 905 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 POMGNT1Q8WZA1 660 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 PLA2G12BQ9BX93 195 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 SLFN14P0C7P3 912 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 RC3H1Q5TC82 1133 aaKnown RBP17.07■□□□□ 0.32
PTPRS-206ENST00000588552 MIS18BP1Q6P0N0 1132 aa17.07■□□□□ 0.32
PTPRS-206ENST00000588552 MARCH10Q8NA82 808 aaPredicted RBP17.07■□□□□ 0.32
PTPRS-206ENST00000588552 FAM170AA1A519 330 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 SNAP25P60880 206 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 POLR2FP61218 127 aaKnown RBP17.06■□□□□ 0.32
PTPRS-206ENST00000588552 TBC1D10BQ4KMP7 808 aaPredicted RBP17.06■□□□□ 0.32
PTPRS-206ENST00000588552 CYB5R4Q7L1T6 521 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 DCAF4Q8WV16 495 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 SLC7A3Q8WY07 619 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 NACC1Q96RE7 527 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 RIPOR2Q9Y4F9 1068 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 GAP43P17677 238 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 TFDP1Q14186 410 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 ATG9AQ7Z3C6 839 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 EEF2KMTQ96G04 330 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 MRFAP1L1Q96HT8 127 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 STK17AQ9UEE5 414 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 CDC25AP30304 524 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 PPP2R5AQ15172 486 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 SLC17A8Q8NDX2 589 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 TMEM47Q9BQJ4 181 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 ST7Q9NRC1 585 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 ZNF277Q9NRM2 450 aaPredicted RBP17.06■□□□□ 0.32
PTPRS-206ENST00000588552 SRPRBQ9Y5M8 271 aaKnown RBP17.06■□□□□ 0.32
PTPRS-206ENST00000588552 HOXA13P31271 388 aaPredicted RBP17.06■□□□□ 0.32
PTPRS-206ENST00000588552 IPO4Q8TEX9 1081 aaKnown RBP17.06■□□□□ 0.32
PTPRS-206ENST00000588552 CNOT6LQ96LI5 555 aaKnown RBP17.06■□□□□ 0.32
PTPRS-206ENST00000588552 SH3GLB2Q9NR46 395 aa17.06■□□□□ 0.32
PTPRS-206ENST00000588552 UTYO14607 1347 aa17.05■□□□□ 0.32
PTPRS-206ENST00000588552 USP17L5A8MUK1 530 aa17.05■□□□□ 0.32
PTPRS-206ENST00000588552 HNRNPDLO14979 420 aaKnown RBP17.05■□□□□ 0.32
PTPRS-206ENST00000588552 COBLO75128 1261 aa17.05■□□□□ 0.32
PTPRS-206ENST00000588552 TMEM191BP0C7N4 346 aa17.05■□□□□ 0.32
PTPRS-206ENST00000588552 ZNF526Q8TF50 670 aaPredicted RBP17.05■□□□□ 0.32
PTPRS-206ENST00000588552 KCNK9Q9NPC2 374 aa17.05■□□□□ 0.32
PTPRS-206ENST00000588552 ATP2C2O75185 946 aa17.05■□□□□ 0.32
PTPRS-206ENST00000588552 ABCB4P21439 1286 aa17.05■□□□□ 0.32
PTPRS-206ENST00000588552 COPB1P53618 953 aaKnown RBP17.05■□□□□ 0.32
PTPRS-206ENST00000588552 SPOUT1Q5T280 376 aaKnown RBP17.05■□□□□ 0.32
PTPRS-206ENST00000588552 NACA2Q9H009 215 aa17.05■□□□□ 0.32
PTPRS-206ENST00000588552 MEIS1O00470 390 aa17.05■□□□□ 0.32
PTPRS-206ENST00000588552 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
PTPRS-206ENST00000588552 CFAP221Q4G0U5 840 aa17.05■□□□□ 0.32
PTPRS-206ENST00000588552 GRAMD1CQ8IYS0 662 aa17.05■□□□□ 0.32
PTPRS-206ENST00000588552 PPM1KQ8N3J5 372 aa17.05■□□□□ 0.32
PTPRS-206ENST00000588552 ARFGAP2Q8N6H7 521 aa17.05■□□□□ 0.32
PTPRS-206ENST00000588552 DHTKD1Q96HY7 919 aaPredicted RBP17.05■□□□□ 0.32
PTPRS-206ENST00000588552 MMS19Q96T76 1030 aa17.05■□□□□ 0.32
PTPRS-206ENST00000588552 TRIM31Q9BZY9 425 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms