RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 E7EWF7 191 aa25.42■■□□□ 1.66
CIRBP-219ENST00000588411 PDE4DQ08499 809 aa25.42■■□□□ 1.66
CIRBP-219ENST00000588411 ANKRD33Q7Z3H0 272 aa25.42■■□□□ 1.66
CIRBP-219ENST00000588411 A0A0U1RQG5 324 aaPredicted RBP25.41■■□□□ 1.66
CIRBP-219ENST00000588411 SMPD1P17405 629 aa25.41■■□□□ 1.66
CIRBP-219ENST00000588411 FSCN1Q16658 493 aaKnown RBP25.41■■□□□ 1.66
CIRBP-219ENST00000588411 QRICH1Q2TAL8 776 aa25.41■■□□□ 1.66
CIRBP-219ENST00000588411 TAPT1Q6NXT6 567 aa25.41■■□□□ 1.66
CIRBP-219ENST00000588411 FBXO11Q86XK2 927 aa25.41■■□□□ 1.66
CIRBP-219ENST00000588411 VAT1LQ9HCJ6 419 aa25.41■■□□□ 1.66
CIRBP-219ENST00000588411 PDGFCQ9NRA1 345 aa25.41■■□□□ 1.66
CIRBP-219ENST00000588411 MRPL11Q9Y3B7 192 aaKnown RBP25.41■■□□□ 1.66
CIRBP-219ENST00000588411 RBM8AQ9Y5S9 174 aaKnown RBP25.41■■□□□ 1.66
CIRBP-219ENST00000588411 DDX49Q9Y6V7 483 aaKnown RBP25.41■■□□□ 1.66
CIRBP-219ENST00000588411 KLRF2D3W0D1 207 aa25.4■■□□□ 1.66
CIRBP-219ENST00000588411 SOX1O00570 391 aaPredicted RBP25.4■■□□□ 1.66
CIRBP-219ENST00000588411 DYNC1LI2O43237 492 aaPredicted RBP25.4■■□□□ 1.66
CIRBP-219ENST00000588411 CABYRO75952 493 aa25.4■■□□□ 1.66
CIRBP-219ENST00000588411 WTAPQ15007 396 aa25.4■■□□□ 1.66
CIRBP-219ENST00000588411 JMJD4Q9H9V9 463 aa25.4■■□□□ 1.66
CIRBP-219ENST00000588411 TMEM39AQ9NV64 488 aa25.4■■□□□ 1.66
CIRBP-219ENST00000588411 TRIM43BA6NCK2 446 aa25.39■■□□□ 1.66
CIRBP-219ENST00000588411 KIAA0355O15063 1070 aa25.39■■□□□ 1.66
CIRBP-219ENST00000588411 GPR153Q6NV75 609 aa25.39■■□□□ 1.66
CIRBP-219ENST00000588411 SH3RF1Q7Z6J0 888 aa25.39■■□□□ 1.66
CIRBP-219ENST00000588411 BADQ92934 168 aa25.39■■□□□ 1.66
CIRBP-219ENST00000588411 TRIM43Q96BQ3 446 aaPredicted RBP25.39■■□□□ 1.66
CIRBP-219ENST00000588411 AMNQ9BXJ7 453 aa25.39■■□□□ 1.66
CIRBP-219ENST00000588411 CTAGE5O15320 804 aa25.38■■□□□ 1.65
CIRBP-219ENST00000588411 RAG1P15918 1043 aa25.38■■□□□ 1.65
CIRBP-219ENST00000588411 IRX5P78411 483 aaPredicted RBP25.38■■□□□ 1.65
CIRBP-219ENST00000588411 BEX3Q00994 111 aa25.38■■□□□ 1.65
CIRBP-219ENST00000588411 TRAF1Q13077 416 aa25.38■■□□□ 1.65
CIRBP-219ENST00000588411 DUSP28Q4G0W2 176 aa25.38■■□□□ 1.65
CIRBP-219ENST00000588411 BMP2KLQ5H9B9 411 aa25.38■■□□□ 1.65
CIRBP-219ENST00000588411 TMEM67Q5HYA8 995 aa25.38■■□□□ 1.65
CIRBP-219ENST00000588411 CATIPQ7Z7H3 387 aa25.38■■□□□ 1.65
CIRBP-219ENST00000588411 LRCH3Q96II8 777 aa25.38■■□□□ 1.65
CIRBP-219ENST00000588411 ESYT1Q9BSJ8 1104 aa25.38■■□□□ 1.65
CIRBP-219ENST00000588411 WDR11Q9BZH6 1224 aa25.38■■□□□ 1.65
CIRBP-219ENST00000588411 LRRC37A2A6NM11 1700 aa25.37■■□□□ 1.65
CIRBP-219ENST00000588411 ARVCFO00192 962 aa25.37■■□□□ 1.65
CIRBP-219ENST00000588411 EDNRBP24530 442 aa25.37■■□□□ 1.65
CIRBP-219ENST00000588411 GRM4Q14833 912 aa25.37■■□□□ 1.65
CIRBP-219ENST00000588411 STAG2Q8N3U4 1231 aa25.37■■□□□ 1.65
CIRBP-219ENST00000588411 SEZ6LQ9BYH1 1024 aa25.37■■□□□ 1.65
CIRBP-219ENST00000588411 MAD2L2Q9UI95 211 aa25.37■■□□□ 1.65
CIRBP-219ENST00000588411 PALM3A6NDB9 673 aaPredicted RBP25.36■■□□□ 1.65
CIRBP-219ENST00000588411 TLR3O15455 904 aaKnown RBP25.36■■□□□ 1.65
CIRBP-219ENST00000588411 PPP2R5BQ15173 497 aa25.36■■□□□ 1.65
CIRBP-219ENST00000588411 BRDTQ58F21 947 aaPredicted RBP25.36■■□□□ 1.65
CIRBP-219ENST00000588411 CASC1Q6TDU7 716 aa25.36■■□□□ 1.65
CIRBP-219ENST00000588411 STOX1Q6ZVD7 989 aa25.36■■□□□ 1.65
CIRBP-219ENST00000588411 NSUN6Q8TEA1 469 aaKnown RBP25.36■■□□□ 1.65
CIRBP-219ENST00000588411 SCFD2Q8WU76 684 aa25.36■■□□□ 1.65
CIRBP-219ENST00000588411 LCTP09848 1927 aa25.35■■□□□ 1.65
CIRBP-219ENST00000588411 RBM47A0AV96 593 aaKnown RBP25.35■■□□□ 1.65
CIRBP-219ENST00000588411 ZBTB5O15062 677 aa25.35■■□□□ 1.65
CIRBP-219ENST00000588411 NKRFO15226 690 aaKnown RBP eCLIP25.35■■□□□ 1.65
CIRBP-219ENST00000588411 CPT1AP50416 773 aa25.35■■□□□ 1.65
CIRBP-219ENST00000588411 CDK7P50613 346 aa25.35■■□□□ 1.65
CIRBP-219ENST00000588411 FAAP100Q0VG06 881 aa25.35■■□□□ 1.65
CIRBP-219ENST00000588411 CXCL17Q6UXB2 119 aa25.35■■□□□ 1.65
CIRBP-219ENST00000588411 CHST3Q7LGC8 479 aa25.35■■□□□ 1.65
CIRBP-219ENST00000588411 MB21D2Q8IYB1 491 aaPredicted RBP25.35■■□□□ 1.65
CIRBP-219ENST00000588411 SYTL5Q8TDW5 730 aaPredicted RBP25.35■■□□□ 1.65
CIRBP-219ENST00000588411 LSG1Q9H089 658 aaKnown RBP25.35■■□□□ 1.65
CIRBP-219ENST00000588411 ANO2Q9NQ90 1003 aa25.35■■□□□ 1.65
CIRBP-219ENST00000588411 TAF6LQ9Y6J9 622 aa25.35■■□□□ 1.65
CIRBP-219ENST00000588411 LAMA3Q16787 3333 aa25.35■■□□□ 1.65
CIRBP-219ENST00000588411 MTMR8Q96EF0 704 aa25.34■■□□□ 1.65
CIRBP-219ENST00000588411 MTA3Q9BTC8 594 aa25.34■■□□□ 1.65
CIRBP-219ENST00000588411 LTBP2Q14767 1821 aa25.34■■□□□ 1.65
CIRBP-219ENST00000588411 OR6J1Q8NGC5 347 aa25.33■■□□□ 1.65
CIRBP-219ENST00000588411 IWS1Q96ST2 819 aa25.33■■□□□ 1.65
CIRBP-219ENST00000588411 RMDN3Q96TC7 470 aa25.33■■□□□ 1.65
CIRBP-219ENST00000588411 POLR3EQ9NVU0 708 aa25.33■■□□□ 1.65
CIRBP-219ENST00000588411 PCDHA1Q9Y5I3 950 aa25.33■■□□□ 1.65
CIRBP-219ENST00000588411 MCM5P33992 734 aa25.32■■□□□ 1.64
CIRBP-219ENST00000588411 FPGSQ05932 587 aa25.32■■□□□ 1.64
CIRBP-219ENST00000588411 TROAPQ12815 778 aa25.32■■□□□ 1.64
CIRBP-219ENST00000588411 TTLL4Q14679 1199 aa25.32■■□□□ 1.64
CIRBP-219ENST00000588411 HOMER1Q86YM7 354 aa25.32■■□□□ 1.64
CIRBP-219ENST00000588411 IGDCC4Q8TDY8 1250 aa25.32■■□□□ 1.64
CIRBP-219ENST00000588411 MAP3K20Q9NYL2 800 aaKnown RBP25.32■■□□□ 1.64
CIRBP-219ENST00000588411 TBX21Q9UL17 535 aa25.32■■□□□ 1.64
CIRBP-219ENST00000588411 DDAH1O94760 285 aa25.31■■□□□ 1.64
CIRBP-219ENST00000588411 CFBP00751 764 aa25.31■■□□□ 1.64
CIRBP-219ENST00000588411 TIMP1P01033 207 aa25.31■■□□□ 1.64
CIRBP-219ENST00000588411 KIF5BP33176 963 aa25.31■■□□□ 1.64
CIRBP-219ENST00000588411 ANTXR2P58335 489 aa25.31■■□□□ 1.64
CIRBP-219ENST00000588411 ITGA7Q13683 1181 aa25.31■■□□□ 1.64
CIRBP-219ENST00000588411 RNF20Q5VTR2 975 aa25.31■■□□□ 1.64
CIRBP-219ENST00000588411 ARHGEF16Q5VV41 709 aa25.31■■□□□ 1.64
CIRBP-219ENST00000588411 FAM126BQ8IXS8 530 aa25.31■■□□□ 1.64
CIRBP-219ENST00000588411 TMTC2Q8N394 836 aa25.31■■□□□ 1.64
CIRBP-219ENST00000588411 SAMD3Q8N6K7 520 aa25.31■■□□□ 1.64
CIRBP-219ENST00000588411 CTCFLQ8NI51 663 aaPredicted RBP25.31■■□□□ 1.64
CIRBP-219ENST00000588411 TBC1D5Q92609 795 aa25.31■■□□□ 1.64
CIRBP-219ENST00000588411 TAAR1Q96RJ0 339 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms