RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 DNERQ8NFT8 737 aa22.76■■□□□ 1.23
TPM4-208ENST00000588410 GLT1D1Q96MS3 346 aa22.76■■□□□ 1.23
TPM4-208ENST00000588410 AMNQ9BXJ7 453 aa22.76■■□□□ 1.23
TPM4-208ENST00000588410 MAF1Q9H063 256 aa22.76■■□□□ 1.23
TPM4-208ENST00000588410 PDGFCQ9NRA1 345 aa22.76■■□□□ 1.23
TPM4-208ENST00000588410 PLXNA1Q9UIW2 1896 aa22.75■■□□□ 1.23
TPM4-208ENST00000588410 PALM3A6NDB9 673 aaPredicted RBP22.75■■□□□ 1.23
TPM4-208ENST00000588410 CDC45O75419 566 aa22.75■■□□□ 1.23
TPM4-208ENST00000588410 ASGR1P07306 291 aa22.75■■□□□ 1.23
TPM4-208ENST00000588410 SMPD1P17405 629 aa22.75■■□□□ 1.23
TPM4-208ENST00000588410 ANTXR2P58335 489 aa22.75■■□□□ 1.23
TPM4-208ENST00000588410 TLE2Q04725 743 aa22.75■■□□□ 1.23
TPM4-208ENST00000588410 CREB3L3Q68CJ9 461 aa22.75■■□□□ 1.23
TPM4-208ENST00000588410 CCSAPQ6IQ19 270 aaPredicted RBP22.75■■□□□ 1.23
TPM4-208ENST00000588410 TAPT1Q6NXT6 567 aa22.75■■□□□ 1.23
TPM4-208ENST00000588410 TLK2Q86UE8 772 aa22.75■■□□□ 1.23
TPM4-208ENST00000588410 SENP2Q9HC62 589 aa22.75■■□□□ 1.23
TPM4-208ENST00000588410 FRMPD3Q5JV73 1810 aa22.74■■□□□ 1.23
TPM4-208ENST00000588410 ZBTB5O15062 677 aa22.74■■□□□ 1.23
TPM4-208ENST00000588410 DYNC1LI2O43237 492 aaPredicted RBP22.74■■□□□ 1.23
TPM4-208ENST00000588410 PRC1O43663 620 aa22.74■■□□□ 1.23
TPM4-208ENST00000588410 MCM5P33992 734 aa22.74■■□□□ 1.23
TPM4-208ENST00000588410 IRX5P78411 483 aaPredicted RBP22.74■■□□□ 1.23
TPM4-208ENST00000588410 RNF20Q5VTR2 975 aa22.74■■□□□ 1.23
TPM4-208ENST00000588410 IGDCC4Q8TDY8 1250 aa22.74■■□□□ 1.23
TPM4-208ENST00000588410 GNEQ9Y223 722 aaKnown RBP22.74■■□□□ 1.23
TPM4-208ENST00000588410 CEP290O15078 2479 aa22.74■■□□□ 1.23
TPM4-208ENST00000588410 ZEB2O60315 1214 aa22.73■■□□□ 1.23
TPM4-208ENST00000588410 PQBP1O60828 265 aaKnown RBP22.73■■□□□ 1.23
TPM4-208ENST00000588410 BEX3Q00994 111 aa22.73■■□□□ 1.23
TPM4-208ENST00000588410 TRAF1Q13077 416 aa22.73■■□□□ 1.23
TPM4-208ENST00000588410 NFXL1Q6ZNB6 911 aa22.73■■□□□ 1.23
TPM4-208ENST00000588410 HOMER1Q86YM7 354 aa22.73■■□□□ 1.23
TPM4-208ENST00000588410 MTA3Q9BTC8 594 aa22.73■■□□□ 1.23
TPM4-208ENST00000588410 Q9Y3F1 56 aa22.73■■□□□ 1.23
TPM4-208ENST00000588410 ELP1O95163 1332 aa22.73■■□□□ 1.23
TPM4-208ENST00000588410 DCDC2CA8MYV0 355 aa22.72■■□□□ 1.23
TPM4-208ENST00000588410 TROAPQ12815 778 aa22.72■■□□□ 1.23
TPM4-208ENST00000588410 NECTIN1Q15223 517 aa22.72■■□□□ 1.23
TPM4-208ENST00000588410 FSCN1Q16658 493 aaKnown RBP22.72■■□□□ 1.23
TPM4-208ENST00000588410 TMTC2Q8N394 836 aa22.72■■□□□ 1.23
TPM4-208ENST00000588410 SYTL5Q8TDW5 730 aaPredicted RBP22.72■■□□□ 1.23
TPM4-208ENST00000588410 WDR11Q9BZH6 1224 aa22.72■■□□□ 1.23
TPM4-208ENST00000588410 PDLIM7Q9NR12 457 aa22.72■■□□□ 1.23
TPM4-208ENST00000588410 ALPK3Q96L96 1907 aa22.71■■□□□ 1.23
TPM4-208ENST00000588410 CCDC69A6NI79 296 aa22.71■■□□□ 1.23
TPM4-208ENST00000588410 CLTBP09497 229 aa22.71■■□□□ 1.23
TPM4-208ENST00000588410 NKX3-2P78367 333 aa22.71■■□□□ 1.23
TPM4-208ENST00000588410 DUSP28Q4G0W2 176 aa22.71■■□□□ 1.23
TPM4-208ENST00000588410 TDHQ8IZJ6 230 aa22.71■■□□□ 1.23
TPM4-208ENST00000588410 CTCFLQ8NI51 663 aaPredicted RBP22.71■■□□□ 1.23
TPM4-208ENST00000588410 NSUN6Q8TEA1 469 aaKnown RBP22.71■■□□□ 1.23
TPM4-208ENST00000588410 TBC1D5Q92609 795 aa22.71■■□□□ 1.23
TPM4-208ENST00000588410 MTMR8Q96EF0 704 aa22.71■■□□□ 1.23
TPM4-208ENST00000588410 TMEM87BQ96K49 555 aa22.71■■□□□ 1.23
TPM4-208ENST00000588410 LY9Q9HBG7 655 aa22.71■■□□□ 1.23
TPM4-208ENST00000588410 PCDHA1Q9Y5I3 950 aa22.71■■□□□ 1.23
TPM4-208ENST00000588410 A0A0U1RQG5 324 aaPredicted RBP22.7■■□□□ 1.22
TPM4-208ENST00000588410 CTAGE5O15320 804 aa22.7■■□□□ 1.22
TPM4-208ENST00000588410 CABYRO75952 493 aa22.7■■□□□ 1.22
TPM4-208ENST00000588410 DDAH1O94760 285 aa22.7■■□□□ 1.22
TPM4-208ENST00000588410 CFBP00751 764 aa22.7■■□□□ 1.22
TPM4-208ENST00000588410 EDNRBP24530 442 aa22.7■■□□□ 1.22
TPM4-208ENST00000588410 KIF5BP33176 963 aa22.7■■□□□ 1.22
TPM4-208ENST00000588410 ZNF654Q8IZM8 581 aa22.7■■□□□ 1.22
TPM4-208ENST00000588410 TAAR1Q96RJ0 339 aa22.7■■□□□ 1.22
TPM4-208ENST00000588410 PIGSQ96S52 555 aa22.7■■□□□ 1.22
TPM4-208ENST00000588410 RIOX1Q9H6W3 641 aa22.7■■□□□ 1.22
TPM4-208ENST00000588410 MROH7Q68CQ1 1323 aa22.69■■□□□ 1.22
TPM4-208ENST00000588410 RBM47A0AV96 593 aaKnown RBP22.69■■□□□ 1.22
TPM4-208ENST00000588410 SH2B2O14492 632 aaPredicted RBP22.69■■□□□ 1.22
TPM4-208ENST00000588410 PPP2R5BQ15173 497 aa22.69■■□□□ 1.22
TPM4-208ENST00000588410 ANKRD33Q7Z3H0 272 aa22.69■■□□□ 1.22
TPM4-208ENST00000588410 SH3RF1Q7Z6J0 888 aa22.69■■□□□ 1.22
TPM4-208ENST00000588410 SCFD2Q8WU76 684 aa22.69■■□□□ 1.22
TPM4-208ENST00000588410 TOX2Q96NM4 488 aa22.69■■□□□ 1.22
TPM4-208ENST00000588410 RMDN3Q96TC7 470 aa22.69■■□□□ 1.22
TPM4-208ENST00000588410 GPHNQ9NQX3 736 aaPredicted RBP22.69■■□□□ 1.22
TPM4-208ENST00000588410 TMEM39AQ9NV64 488 aa22.69■■□□□ 1.22
TPM4-208ENST00000588410 PNMA6FA0A0J9YX94 578 aa22.68■■□□□ 1.22
TPM4-208ENST00000588410 TRIM43BA6NCK2 446 aa22.68■■□□□ 1.22
TPM4-208ENST00000588410 PTGS1P23219 599 aa22.68■■□□□ 1.22
TPM4-208ENST00000588410 TMEM63BQ5T3F8 832 aa22.68■■□□□ 1.22
TPM4-208ENST00000588410 ARHGEF16Q5VV41 709 aa22.68■■□□□ 1.22
TPM4-208ENST00000588410 CXCL17Q6UXB2 119 aa22.68■■□□□ 1.22
TPM4-208ENST00000588410 TRIM43Q96BQ3 446 aaPredicted RBP22.68■■□□□ 1.22
TPM4-208ENST00000588410 IWS1Q96ST2 819 aa22.68■■□□□ 1.22
TPM4-208ENST00000588410 MAP3K14Q99558 947 aa22.68■■□□□ 1.22
TPM4-208ENST00000588410 MYL10Q9BUA6 226 aa22.68■■□□□ 1.22
TPM4-208ENST00000588410 ARVCFO00192 962 aa22.67■■□□□ 1.22
TPM4-208ENST00000588410 NKRFO15226 690 aaKnown RBP eCLIP22.67■■□□□ 1.223e-8■■■□□ 18
TPM4-208ENST00000588410 PPP1R11O60927 126 aaPredicted RBP22.67■■□□□ 1.22
TPM4-208ENST00000588410 RAG1P15918 1043 aa22.67■■□□□ 1.22
TPM4-208ENST00000588410 GNAQP50148 359 aa22.67■■□□□ 1.22
TPM4-208ENST00000588410 BRDTQ58F21 947 aaPredicted RBP22.67■■□□□ 1.22
TPM4-208ENST00000588410 OR6J1Q8NGC5 347 aa22.67■■□□□ 1.22
TPM4-208ENST00000588410 PIBF1Q8WXW3 757 aa22.67■■□□□ 1.22
TPM4-208ENST00000588410 BADQ92934 168 aa22.67■■□□□ 1.22
TPM4-208ENST00000588410 LZTS2Q9BRK4 669 aa22.67■■□□□ 1.22
TPM4-208ENST00000588410 MAP3K20Q9NYL2 800 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms