RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 ATAD5Q96QE3 1844 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 DOCK1Q14185 1865 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 SPDYE5A6NIY4 337 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 SPDYE3A6NKU9 549 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 GCOM1H8Y6P7 765 aaPredicted RBP11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 KINO60870 393 aaKnown RBP11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 POLR2MP0CAP2 368 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 GCFC2P16383 781 aaKnown RBP11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 MCM7P33993 719 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 PRPHP41219 470 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 OAZ1P54368 228 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 HMGCS2P54868 508 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 SNAP25P60880 206 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 PDAP1Q13442 181 aaKnown RBP11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 LETM2Q2VYF4 491 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 USH1GQ495M9 461 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 NOM1Q5C9Z4 860 aaKnown RBP11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 RESP18Q5W5W9 173 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 PPP4R3AQ6IN85 833 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 CCDC174Q6PII3 467 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 ENGASEQ8NFI3 743 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 CCDC34Q96HJ3 373 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 TIGD1Q96MW7 591 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 PYM1Q9BRP8 204 aaKnown RBP11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 NUP62CLQ9H1M0 184 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 SLC38A10Q9HBR0 1119 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 FBXO28Q9NVF7 368 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 TMEM260Q9NX78 707 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 FZD1Q9UP38 647 aa11.94□□□□□ -0.5
CHMP1B-202ENST00000588284 MEIS2O14770 477 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 ADAMTS3O15072 1205 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 CCNT1O60563 726 aaKnown RBP11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 LONP1P36776 959 aaKnown RBP11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 PABPC4Q13310 644 aaKnown RBP eCLIP11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 PPIL2Q13356 520 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 TKFCQ3LXA3 575 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 MAP1SQ66K74 1059 aaPredicted RBP11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 MOXD1Q6UVY6 613 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 DLK2Q6UY11 383 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 DTHD1Q6ZMT9 781 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 FASTKD5Q7L8L6 764 aaKnown RBP11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 FMR1NBQ8N0W7 255 aaPredicted RBP11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 C4orf32Q8N8J7 132 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 C2orf69Q8N8R5 385 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 PROCA1Q8NCQ7 364 aaPredicted RBP11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 SDF4Q9BRK5 362 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 TNMDQ9H2S6 317 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 CLSTN2Q9H4D0 955 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 ELP3Q9H9T3 547 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 CCPG1Q9ULG6 757 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 ADAMTS5Q9UNA0 930 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 RABGAP1Q9Y3P9 1069 aa11.93□□□□□ -0.5
CHMP1B-202ENST00000588284 A0A1B0GVL5 298 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 VWA5AO00534 786 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 NR1I2O75469 434 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 GABBR2O75899 941 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 ZNF202O95125 648 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 HOXA7P31268 230 aaPredicted RBP11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 SYKP43405 635 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 SNW1Q13573 536 aaKnown RBP11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 UBE2SQ16763 222 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 KANK3Q6NY19 840 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 USP17L6PQ6QN14 398 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 SHC4Q6S5L8 630 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 LRSAM1Q6UWE0 723 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 ELOA2Q8IYF1 753 aaPredicted RBP11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 CLIC6Q96NY7 704 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 ANO3Q9BYT9 981 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 USP25Q9UHP3 1055 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 HOOK1Q9UJC3 728 aaKnown RBP11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 KCNH4Q9UQ05 1017 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 HPSEQ9Y251 543 aa11.92□□□□□ -0.5
CHMP1B-202ENST00000588284 CYP3A7-CYP3A51PA0A087WV96 503 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 A0A0G2JLL6 359 aaPredicted RBP11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 GOLGA6L3A6NEY3 463 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 ATP2A1O14983 1001 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 MARCH6O60337 910 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 NEMFO60524 1076 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 CFBP00751 764 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 OR52Z1P0C646 297 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 PFKFB1P16118 471 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 CYP3A7P24462 503 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 TXLNAP40222 546 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 NDUFA8P51970 172 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 PRRT2Q7Z6L0 340 aaPredicted RBP11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 CPXCR1Q8N123 301 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 OTUD5Q96G74 571 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 AK8Q96MA6 479 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 AGBL1Q96MI9 1066 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 RAB34Q9BZG1 259 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 CSRNP2Q9H175 543 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 KCNH3Q9ULD8 1083 aa11.91□□□□□ -0.5
CHMP1B-202ENST00000588284 ZNF536O15090 1300 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 SYCE3A1L190 88 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 VWA3AA6NCI4 1184 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 IRF6O14896 467 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 CYP3A4P08684 503 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 ALAS1P13196 640 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 OSBPP22059 807 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms