RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 SPC25Q9HBM1 224 aa23.36■■□□□ 1.33
TRAPPC6A-203ENST00000587818 CTAGE5O15320 804 aa23.35■■□□□ 1.33
TRAPPC6A-203ENST00000587818 BMP8BP34820 402 aa23.35■■□□□ 1.33
TRAPPC6A-203ENST00000587818 GRM4Q14833 912 aa23.35■■□□□ 1.33
TRAPPC6A-203ENST00000587818 CREB3L3Q68CJ9 461 aa23.35■■□□□ 1.33
TRAPPC6A-203ENST00000587818 IQSEC1Q6DN90 963 aa23.35■■□□□ 1.33
TRAPPC6A-203ENST00000587818 UBE2OQ9C0C9 1292 aaKnown RBP23.35■■□□□ 1.33
TRAPPC6A-203ENST00000587818 GNEQ9Y223 722 aaKnown RBP23.35■■□□□ 1.33
TRAPPC6A-203ENST00000587818 ABCB11O95342 1321 aa23.34■■□□□ 1.33
TRAPPC6A-203ENST00000587818 ASGR1P07306 291 aa23.34■■□□□ 1.33
TRAPPC6A-203ENST00000587818 SART3Q15020 963 aaKnown RBP23.34■■□□□ 1.33
TRAPPC6A-203ENST00000587818 NECTIN1Q15223 517 aa23.34■■□□□ 1.33
TRAPPC6A-203ENST00000587818 TAAR1Q96RJ0 339 aa23.34■■□□□ 1.33
TRAPPC6A-203ENST00000587818 VTA1Q9NP79 307 aa23.34■■□□□ 1.33
TRAPPC6A-203ENST00000587818 STARD7Q9NQZ5 370 aa23.34■■□□□ 1.33
TRAPPC6A-203ENST00000587818 PRKAG2Q9UGJ0 569 aa23.34■■□□□ 1.33
TRAPPC6A-203ENST00000587818 TRIM43BA6NCK2 446 aa23.33■■□□□ 1.33
TRAPPC6A-203ENST00000587818 PRC1O43663 620 aa23.33■■□□□ 1.33
TRAPPC6A-203ENST00000587818 PQBP1O60828 265 aaKnown RBP23.33■■□□□ 1.33
TRAPPC6A-203ENST00000587818 PPP1R11O60927 126 aaPredicted RBP23.33■■□□□ 1.33
TRAPPC6A-203ENST00000587818 HOMER1Q86YM7 354 aa23.33■■□□□ 1.33
TRAPPC6A-203ENST00000587818 RGS22Q8NE09 1264 aa23.33■■□□□ 1.33
TRAPPC6A-203ENST00000587818 NUP133Q8WUM0 1156 aa23.33■■□□□ 1.33
TRAPPC6A-203ENST00000587818 TRIM43Q96BQ3 446 aaPredicted RBP23.33■■□□□ 1.33
TRAPPC6A-203ENST00000587818 PIGSQ96S52 555 aa23.33■■□□□ 1.33
TRAPPC6A-203ENST00000587818 LBHD1Q9BQE6 289 aaPredicted RBP23.33■■□□□ 1.33
TRAPPC6A-203ENST00000587818 MYL10Q9BUA6 226 aa23.33■■□□□ 1.33
TRAPPC6A-203ENST00000587818 AP5M1Q9H0R1 490 aa23.33■■□□□ 1.33
TRAPPC6A-203ENST00000587818 COL20A1Q9P218 1284 aa23.33■■□□□ 1.33
TRAPPC6A-203ENST00000587818 MOXD2PA6NHM9 499 aa23.32■■□□□ 1.32
TRAPPC6A-203ENST00000587818 CST5P28325 142 aaPredicted RBP23.32■■□□□ 1.32
TRAPPC6A-203ENST00000587818 PDE4DQ08499 809 aa23.32■■□□□ 1.32
TRAPPC6A-203ENST00000587818 TROAPQ12815 778 aa23.32■■□□□ 1.32
TRAPPC6A-203ENST00000587818 C1orf53Q5VUE5 145 aa23.32■■□□□ 1.32
TRAPPC6A-203ENST00000587818 CATIPQ7Z7H3 387 aa23.32■■□□□ 1.32
TRAPPC6A-203ENST00000587818 TLK2Q86UE8 772 aa23.32■■□□□ 1.32
TRAPPC6A-203ENST00000587818 PCSK9Q8NBP7 692 aaKnown RBP23.32■■□□□ 1.32
TRAPPC6A-203ENST00000587818 SYTL5Q8TDW5 730 aaPredicted RBP23.32■■□□□ 1.32
TRAPPC6A-203ENST00000587818 PIBF1Q8WXW3 757 aa23.32■■□□□ 1.32
TRAPPC6A-203ENST00000587818 PDLIM7Q9NR12 457 aa23.32■■□□□ 1.32
TRAPPC6A-203ENST00000587818 MRPL11Q9Y3B7 192 aaKnown RBP23.32■■□□□ 1.32
TRAPPC6A-203ENST00000587818 SOX1O00570 391 aaPredicted RBP23.31■■□□□ 1.32
TRAPPC6A-203ENST00000587818 CASC1Q6TDU7 716 aa23.31■■□□□ 1.32
TRAPPC6A-203ENST00000587818 MTMR8Q96EF0 704 aa23.31■■□□□ 1.32
TRAPPC6A-203ENST00000587818 GLT1D1Q96MS3 346 aa23.31■■□□□ 1.32
TRAPPC6A-203ENST00000587818 AMNQ9BXJ7 453 aa23.31■■□□□ 1.32
TRAPPC6A-203ENST00000587818 LRRC2Q9BYS8 371 aa23.31■■□□□ 1.32
TRAPPC6A-203ENST00000587818 WDR11Q9BZH6 1224 aa23.31■■□□□ 1.32
TRAPPC6A-203ENST00000587818 LY9Q9HBG7 655 aa23.31■■□□□ 1.32
TRAPPC6A-203ENST00000587818 LRRC37A2A6NM11 1700 aa23.3■■□□□ 1.32
TRAPPC6A-203ENST00000587818 ZBTB5O15062 677 aa23.3■■□□□ 1.32
TRAPPC6A-203ENST00000587818 CYTH3O43739 400 aa23.3■■□□□ 1.32
TRAPPC6A-203ENST00000587818 CDC45O75419 566 aa23.3■■□□□ 1.32
TRAPPC6A-203ENST00000587818 CFBP00751 764 aa23.3■■□□□ 1.32
TRAPPC6A-203ENST00000587818 CXCL17Q6UXB2 119 aa23.3■■□□□ 1.32
TRAPPC6A-203ENST00000587818 BADQ92934 168 aa23.3■■□□□ 1.32
TRAPPC6A-203ENST00000587818 RIOX1Q9H6W3 641 aa23.3■■□□□ 1.32
TRAPPC6A-203ENST00000587818 A0A1W2PPC1 479 aa23.29■■□□□ 1.32
TRAPPC6A-203ENST00000587818 ITGB8P26012 769 aa23.29■■□□□ 1.32
TRAPPC6A-203ENST00000587818 MCM5P33992 734 aa23.29■■□□□ 1.32
TRAPPC6A-203ENST00000587818 NKX3-2P78367 333 aa23.29■■□□□ 1.32
TRAPPC6A-203ENST00000587818 FSCN1Q16658 493 aaKnown RBP23.29■■□□□ 1.32
TRAPPC6A-203ENST00000587818 NFXL1Q6ZNB6 911 aa23.29■■□□□ 1.32
TRAPPC6A-203ENST00000587818 MCF2L2Q86YR7 1114 aa23.29■■□□□ 1.32
TRAPPC6A-203ENST00000587818 RAB11FIP4Q86YS3 637 aa23.29■■□□□ 1.32
TRAPPC6A-203ENST00000587818 DNERQ8NFT8 737 aa23.29■■□□□ 1.32
TRAPPC6A-203ENST00000587818 LRCH3Q96II8 777 aa23.29■■□□□ 1.32
TRAPPC6A-203ENST00000587818 PCDHA1Q9Y5I3 950 aa23.29■■□□□ 1.32
TRAPPC6A-203ENST00000587818 RANBP2P49792 3224 aaKnown RBP23.29■■□□□ 1.32
TRAPPC6A-203ENST00000587818 RBM47A0AV96 593 aaKnown RBP23.28■■□□□ 1.32
TRAPPC6A-203ENST00000587818 SH2B2O14492 632 aaPredicted RBP23.28■■□□□ 1.32
TRAPPC6A-203ENST00000587818 OPLAHO14841 1288 aa23.28■■□□□ 1.32
TRAPPC6A-203ENST00000587818 CLTBP09497 229 aa23.28■■□□□ 1.32
TRAPPC6A-203ENST00000587818 EDNRBP24530 442 aa23.28■■□□□ 1.32
TRAPPC6A-203ENST00000587818 DUSP28Q4G0W2 176 aa23.28■■□□□ 1.32
TRAPPC6A-203ENST00000587818 ZNF654Q8IZM8 581 aa23.28■■□□□ 1.32
TRAPPC6A-203ENST00000587818 COPS5Q92905 334 aa23.28■■□□□ 1.32
TRAPPC6A-203ENST00000587818 ELP1O95163 1332 aa23.28■■□□□ 1.32
TRAPPC6A-203ENST00000587818 LOC102724159A0A0B4J2E5 919 aa23.27■■□□□ 1.32
TRAPPC6A-203ENST00000587818 NEFLP07196 543 aa23.27■■□□□ 1.32
TRAPPC6A-203ENST00000587818 RXRAP19793 462 aa23.27■■□□□ 1.32
TRAPPC6A-203ENST00000587818 CDK7P50613 346 aa23.27■■□□□ 1.32
TRAPPC6A-203ENST00000587818 FAAP100Q0VG06 881 aa23.27■■□□□ 1.32
TRAPPC6A-203ENST00000587818 PWP2Q15269 919 aaKnown RBP23.27■■□□□ 1.32
TRAPPC6A-203ENST00000587818 RASEFQ8IZ41 740 aa23.27■■□□□ 1.32
TRAPPC6A-203ENST00000587818 TDHQ8IZJ6 230 aa23.27■■□□□ 1.32
TRAPPC6A-203ENST00000587818 RMDN3Q96TC7 470 aa23.27■■□□□ 1.32
TRAPPC6A-203ENST00000587818 TMEM39AQ9NV64 488 aa23.27■■□□□ 1.32
TRAPPC6A-203ENST00000587818 Q9Y3F1 56 aa23.27■■□□□ 1.32
TRAPPC6A-203ENST00000587818 DCDC2CA8MYV0 355 aa23.26■■□□□ 1.31
TRAPPC6A-203ENST00000587818 B4DLN1 442 aa23.26■■□□□ 1.31
TRAPPC6A-203ENST00000587818 EIF2AK2P19525 551 aaKnown RBP23.26■■□□□ 1.31
TRAPPC6A-203ENST00000587818 HOXA13P31271 388 aaPredicted RBP23.26■■□□□ 1.31
TRAPPC6A-203ENST00000587818 MRPL12P52815 198 aaKnown RBP23.26■■□□□ 1.31
TRAPPC6A-203ENST00000587818 NSUN6Q8TEA1 469 aaKnown RBP23.26■■□□□ 1.31
TRAPPC6A-203ENST00000587818 TMEM87BQ96K49 555 aa23.26■■□□□ 1.31
TRAPPC6A-203ENST00000587818 MPHOSPH6Q99547 160 aaKnown RBP23.26■■□□□ 1.31
TRAPPC6A-203ENST00000587818 PNMA6FA0A0J9YX94 578 aa23.25■■□□□ 1.31
TRAPPC6A-203ENST00000587818 CCDC69A6NI79 296 aa23.25■■□□□ 1.31
TRAPPC6A-203ENST00000587818 ARVCFO00192 962 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms