RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 AMIGO3Q86WK7 504 aa7.13□□□□□ -1.27
CACNA1A-208ENST00000587451 FAM178BQ8IXR5 827 aa7.13□□□□□ -1.27
CACNA1A-208ENST00000587451 ZNF428Q96B54 188 aa7.13□□□□□ -1.27
CACNA1A-208ENST00000587451 TINF2Q9BSI4 451 aa7.13□□□□□ -1.27
CACNA1A-208ENST00000587451 MCMBPQ9BTE3 642 aa7.13□□□□□ -1.27
CACNA1A-208ENST00000587451 LRP2BPQ9P2M1 347 aa7.13□□□□□ -1.27
CACNA1A-208ENST00000587451 NUDT5Q9UKK9 219 aa7.13□□□□□ -1.27
CACNA1A-208ENST00000587451 NPHS1O60500 1241 aa7.12□□□□□ -1.27
CACNA1A-208ENST00000587451 MSL3P1P0C860 447 aa7.12□□□□□ -1.27
CACNA1A-208ENST00000587451 PFKLP17858 780 aa7.12□□□□□ -1.27
CACNA1A-208ENST00000587451 TACR1P25103 407 aa7.12□□□□□ -1.27
CACNA1A-208ENST00000587451 TARBP2Q15633 366 aaKnown RBP7.12□□□□□ -1.27
CACNA1A-208ENST00000587451 LZTR1Q8N653 840 aa7.12□□□□□ -1.27
CACNA1A-208ENST00000587451 AGRPO00253 132 aa7.11□□□□□ -1.27
CACNA1A-208ENST00000587451 FGRP09769 529 aa7.11□□□□□ -1.27
CACNA1A-208ENST00000587451 PI3P19957 117 aa7.11□□□□□ -1.27
CACNA1A-208ENST00000587451 CDR1P51861 262 aa7.11□□□□□ -1.27
CACNA1A-208ENST00000587451 EPHB3P54753 998 aa7.11□□□□□ -1.27
CACNA1A-208ENST00000587451 SV2CQ496J9 727 aa7.11□□□□□ -1.27
CACNA1A-208ENST00000587451 LCNL1Q6ZST4 164 aa7.11□□□□□ -1.27
CACNA1A-208ENST00000587451 LDHDQ86WU2 507 aa7.11□□□□□ -1.27
CACNA1A-208ENST00000587451 TRIM59Q8IWR1 403 aa7.11□□□□□ -1.27
CACNA1A-208ENST00000587451 SLC43A3Q8NBI5 491 aa7.11□□□□□ -1.27
CACNA1A-208ENST00000587451 USP33Q8TEY7 942 aa7.11□□□□□ -1.27
CACNA1A-208ENST00000587451 PODXL2Q9NZ53 605 aa7.11□□□□□ -1.27
CACNA1A-208ENST00000587451 SCRN1Q12765 414 aa7.1□□□□□ -1.27
CACNA1A-208ENST00000587451 GTF2IRD2BQ6EKJ0 949 aa7.1□□□□□ -1.27
CACNA1A-208ENST00000587451 GTF2IRD2Q86UP8 949 aa7.1□□□□□ -1.27
CACNA1A-208ENST00000587451 ZNF513Q8N8E2 541 aaPredicted RBP7.1□□□□□ -1.27
CACNA1A-208ENST00000587451 EPN3Q9H201 632 aa7.1□□□□□ -1.27
CACNA1A-208ENST00000587451 ZNF408Q9H9D4 720 aa7.1□□□□□ -1.27
CACNA1A-208ENST00000587451 CYP26B1Q9NR63 512 aa7.1□□□□□ -1.27
CACNA1A-208ENST00000587451 F8W031 263 aaPredicted RBP7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 SUSD5O60279 629 aa7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 ETFBP38117 255 aa7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 ZNF200P98182 395 aaPredicted RBP7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 SSPNQ14714 243 aa7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 IQCEQ6IPM2 695 aa7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 CNKSR3Q6P9H4 555 aa7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 EEPD1Q7L9B9 569 aa7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 CPNE8Q86YQ8 564 aa7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 NLGN1Q8N2Q7 840 aa7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 NETO2Q8NC67 525 aa7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 COPS5Q92905 334 aa7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 MMP19Q99542 508 aa7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 NKX2-4Q9H2Z4 354 aa7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 RWDD3Q9Y3V2 267 aa7.09□□□□□ -1.27
CACNA1A-208ENST00000587451 IRS4O14654 1257 aaPredicted RBP7.08□□□□□ -1.28
CACNA1A-208ENST00000587451 BUB1BO60566 1050 aaPredicted RBP7.08□□□□□ -1.28
CACNA1A-208ENST00000587451 PLS3P13797 630 aa7.08□□□□□ -1.28
CACNA1A-208ENST00000587451 MCF2L2Q86YR7 1114 aa7.08□□□□□ -1.28
CACNA1A-208ENST00000587451 PEX11GQ96HA9 241 aa7.08□□□□□ -1.28
CACNA1A-208ENST00000587451 CCDC140Q96MF4 163 aa7.08□□□□□ -1.28
CACNA1A-208ENST00000587451 CLEC1BQ9P126 229 aa7.08□□□□□ -1.28
CACNA1A-208ENST00000587451 FAN1Q9Y2M0 1017 aa7.08□□□□□ -1.28
CACNA1A-208ENST00000587451 PCDHA5Q9Y5H7 936 aa7.08□□□□□ -1.28
CACNA1A-208ENST00000587451 CPP00450 1065 aa7.07□□□□□ -1.28
CACNA1A-208ENST00000587451 GLI4P10075 376 aa7.07□□□□□ -1.28
CACNA1A-208ENST00000587451 HOXC12P31275 282 aa7.07□□□□□ -1.28
CACNA1A-208ENST00000587451 AFF3P51826 1226 aaKnown RBP7.07□□□□□ -1.28
CACNA1A-208ENST00000587451 SLC9A5Q14940 896 aa7.07□□□□□ -1.28
CACNA1A-208ENST00000587451 IGDCC3Q8IVU1 814 aa7.07□□□□□ -1.28
CACNA1A-208ENST00000587451 MRGPRX3Q96LB0 322 aa7.07□□□□□ -1.28
CACNA1A-208ENST00000587451 KRTAP4-11Q9BYQ6 195 aa7.07□□□□□ -1.28
CACNA1A-208ENST00000587451 RNF38Q9H0F5 515 aa7.07□□□□□ -1.28
CACNA1A-208ENST00000587451 GULP1Q9UBP9 304 aa7.07□□□□□ -1.28
CACNA1A-208ENST00000587451 ZC3H12DA2A288 527 aaKnown RBP7.06□□□□□ -1.28
CACNA1A-208ENST00000587451 C7orf72A4D263 438 aa7.06□□□□□ -1.28
CACNA1A-208ENST00000587451 B2RBV5 119 aa7.06□□□□□ -1.28
CACNA1A-208ENST00000587451 MYO1BO43795 1136 aa7.06□□□□□ -1.28
CACNA1A-208ENST00000587451 ZBTB7AO95365 584 aa7.06□□□□□ -1.28
CACNA1A-208ENST00000587451 THBDP07204 575 aa7.06□□□□□ -1.28
CACNA1A-208ENST00000587451 PRR5P85299 388 aa7.06□□□□□ -1.28
CACNA1A-208ENST00000587451 E4F1Q66K89 784 aaPredicted RBP7.06□□□□□ -1.28
CACNA1A-208ENST00000587451 WWC2Q6AWC2 1192 aa7.06□□□□□ -1.28
CACNA1A-208ENST00000587451 ZNF227Q86WZ6 799 aa7.06□□□□□ -1.28
CACNA1A-208ENST00000587451 DCP2Q8IU60 420 aaKnown RBP7.06□□□□□ -1.28
CACNA1A-208ENST00000587451 BTN2A2Q8WVV5 523 aa7.06□□□□□ -1.28
CACNA1A-208ENST00000587451 ALG3Q92685 438 aa7.06□□□□□ -1.28
CACNA1A-208ENST00000587451 GMLQ99445 158 aa7.06□□□□□ -1.28
CACNA1A-208ENST00000587451 GPRC5CQ9NQ84 441 aa7.06□□□□□ -1.28
CACNA1A-208ENST00000587451 ITGAVP06756 1048 aa7.05□□□□□ -1.28
CACNA1A-208ENST00000587451 SNRPB2P08579 225 aaKnown RBP7.05□□□□□ -1.28
CACNA1A-208ENST00000587451 NCAM1P13591 858 aa7.05□□□□□ -1.28
CACNA1A-208ENST00000587451 GTF2A2P52657 109 aa7.05□□□□□ -1.28
CACNA1A-208ENST00000587451 NCKAP1LP55160 1127 aa7.05□□□□□ -1.28
CACNA1A-208ENST00000587451 ZC3H6P61129 1189 aaKnown RBP7.05□□□□□ -1.28
CACNA1A-208ENST00000587451 KCNAB2Q13303 367 aa7.05□□□□□ -1.28
CACNA1A-208ENST00000587451 FAM129CQ86XR2 697 aa7.05□□□□□ -1.28
CACNA1A-208ENST00000587451 DACT3Q96B18 629 aaPredicted RBP7.05□□□□□ -1.28
CACNA1A-208ENST00000587451 TSPAN17Q96FV3 270 aa7.05□□□□□ -1.28
CACNA1A-208ENST00000587451 RAPGEFL1Q9UHV5 662 aa7.05□□□□□ -1.28
CACNA1A-208ENST00000587451 IRS2Q9Y4H2 1338 aa7.04□□□□□ -1.28
CACNA1A-208ENST00000587451 MEFVO15553 781 aaPredicted RBP7.04□□□□□ -1.28
CACNA1A-208ENST00000587451 GJB6O95452 261 aa7.04□□□□□ -1.28
CACNA1A-208ENST00000587451 FUCA1P04066 466 aa7.04□□□□□ -1.28
CACNA1A-208ENST00000587451 KCNJ6P48051 423 aa7.04□□□□□ -1.28
CACNA1A-208ENST00000587451 RPL11P62913 178 aaKnown RBP7.04□□□□□ -1.28
CACNA1A-208ENST00000587451 ANKS3Q6ZW76 656 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms