RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 BCRP11274 1271 aa17.09■□□□□ 0.33
NFIX-208ENST00000587260 NSMFQ6X4W1 530 aa17.09■□□□□ 0.33
NFIX-208ENST00000587260 RASGRP4Q8TDF6 673 aa17.09■□□□□ 0.33
NFIX-208ENST00000587260 OXER1Q8TDS5 423 aa17.09■□□□□ 0.33
NFIX-208ENST00000587260 CUL5Q93034 780 aa17.09■□□□□ 0.33
NFIX-208ENST00000587260 GLT8D2Q9H1C3 349 aa17.09■□□□□ 0.33
NFIX-208ENST00000587260 PSTPIP2Q9H939 334 aa17.09■□□□□ 0.33
NFIX-208ENST00000587260 EFCC1Q9HA90 598 aa17.09■□□□□ 0.33
NFIX-208ENST00000587260 HOXA13P31271 388 aaPredicted RBP17.08■□□□□ 0.32
NFIX-208ENST00000587260 CCNA1P78396 465 aa17.08■□□□□ 0.32
NFIX-208ENST00000587260 TKFCQ3LXA3 575 aa17.08■□□□□ 0.32
NFIX-208ENST00000587260 MYSM1Q5VVJ2 828 aa17.08■□□□□ 0.32
NFIX-208ENST00000587260 USP17L6PQ6QN14 398 aa17.08■□□□□ 0.32
NFIX-208ENST00000587260 C17orf99Q6UX52 265 aa17.08■□□□□ 0.32
NFIX-208ENST00000587260 SLC30A10Q6XR72 485 aa17.08■□□□□ 0.32
NFIX-208ENST00000587260 BICD2Q8TD16 824 aa17.08■□□□□ 0.32
NFIX-208ENST00000587260 TBC1D5Q92609 795 aa17.08■□□□□ 0.32
NFIX-208ENST00000587260 RIC8AQ9NPQ8 531 aa17.08■□□□□ 0.32
NFIX-208ENST00000587260 TMEM260Q9NX78 707 aa17.08■□□□□ 0.32
NFIX-208ENST00000587260 SLC25A27O95847 323 aa17.07■□□□□ 0.32
NFIX-208ENST00000587260 DNM1Q05193 864 aaKnown RBP17.07■□□□□ 0.32
NFIX-208ENST00000587260 NR5A1Q13285 461 aa17.07■□□□□ 0.32
NFIX-208ENST00000587260 GNL2Q13823 731 aaKnown RBP17.07■□□□□ 0.32
NFIX-208ENST00000587260 FAM173BQ6P4H8 233 aa17.07■□□□□ 0.32
NFIX-208ENST00000587260 CCAR1Q8IX12 1150 aaKnown RBP17.07■□□□□ 0.32
NFIX-208ENST00000587260 CHST13Q8NET6 341 aa17.07■□□□□ 0.32
NFIX-208ENST00000587260 PGBD1Q96JS3 809 aa17.07■□□□□ 0.32
NFIX-208ENST00000587260 BIN2Q9UBW5 565 aaPredicted RBP17.07■□□□□ 0.32
NFIX-208ENST00000587260 MCM4P33991 863 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 COPB2P35606 906 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 MRPL12P52815 198 aaKnown RBP17.06■□□□□ 0.32
NFIX-208ENST00000587260 KRT85P78386 507 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 RNF207Q6ZRF8 634 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 REXO1Q8N1G1 1221 aaKnown RBP17.06■□□□□ 0.32
NFIX-208ENST00000587260 ZNF396Q96N95 335 aaPredicted RBP17.06■□□□□ 0.32
NFIX-208ENST00000587260 A1CFQ9NQ94 594 aaKnown RBP17.06■□□□□ 0.32
NFIX-208ENST00000587260 FBXO40Q9UH90 709 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 CFAP45Q9UL16 551 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 PCDHA6Q9UN73 950 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 PCDHA8Q9Y5H6 950 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 PLXNA1Q9UIW2 1896 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 GCOM1H8Y6P7 765 aaPredicted RBP17.06■□□□□ 0.32
NFIX-208ENST00000587260 MEIS2O14770 477 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 POLR2MP0CAP2 368 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 NOM1Q5C9Z4 860 aaKnown RBP17.06■□□□□ 0.32
NFIX-208ENST00000587260 RILPL1Q5EBL4 403 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 JAKMIP3Q5VZ66 844 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 MCF2L2Q86YR7 1114 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 ANKRD35Q8N283 1001 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 SHCBP1Q8NEM2 672 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 CHAMP1Q96JM3 812 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 MROH8Q9H579 483 aa17.06■□□□□ 0.32
NFIX-208ENST00000587260 ZNFX1Q9P2E3 1918 aaKnown RBP17.06■□□□□ 0.32
NFIX-208ENST00000587260 ZNF236Q9UL36 1845 aa17.05■□□□□ 0.32
NFIX-208ENST00000587260 CLK2P49760 499 aaKnown RBP17.05■□□□□ 0.32
NFIX-208ENST00000587260 RPS6P62753 249 aaKnown RBP17.05■□□□□ 0.32
NFIX-208ENST00000587260 NFKBIBQ15653 356 aa17.05■□□□□ 0.32
NFIX-208ENST00000587260 FOXD4L6Q3SYB3 417 aaPredicted RBP17.05■□□□□ 0.32
NFIX-208ENST00000587260 FOXD4L3Q6VB84 417 aaPredicted RBP17.05■□□□□ 0.32
NFIX-208ENST00000587260 FCHSD1Q86WN1 690 aa17.05■□□□□ 0.32
NFIX-208ENST00000587260 TMEM87AQ8NBN3 555 aa17.05■□□□□ 0.32
NFIX-208ENST00000587260 MMP19Q99542 508 aa17.05■□□□□ 0.32
NFIX-208ENST00000587260 SCAND2PQ9GZW5 306 aaPredicted RBP17.05■□□□□ 0.32
NFIX-208ENST00000587260 POLR3EQ9NVU0 708 aa17.05■□□□□ 0.32
NFIX-208ENST00000587260 TSKSQ9UJT2 592 aa17.05■□□□□ 0.32
NFIX-208ENST00000587260 MYH7BA7E2Y1 1941 aa17.04■□□□□ 0.32
NFIX-208ENST00000587260 FAM205CA6NFA0 338 aa17.04■□□□□ 0.32
NFIX-208ENST00000587260 GOLGA6L22H0YM25 854 aa17.04■□□□□ 0.32
NFIX-208ENST00000587260 PIK3CDO00329 1044 aa17.04■□□□□ 0.32
NFIX-208ENST00000587260 TRAPPC10P48553 1259 aa17.04■□□□□ 0.32
NFIX-208ENST00000587260 HSD17B4P51659 736 aa17.04■□□□□ 0.32
NFIX-208ENST00000587260 MAP2K1Q02750 393 aaPredicted RBP17.04■□□□□ 0.32
NFIX-208ENST00000587260 BAATQ14032 418 aaPredicted RBP17.04■□□□□ 0.32
NFIX-208ENST00000587260 EARS2Q5JPH6 523 aaKnown RBP17.04■□□□□ 0.32
NFIX-208ENST00000587260 MCTP2Q6DN12 878 aa17.04■□□□□ 0.32
NFIX-208ENST00000587260 GPR142Q7Z601 462 aa17.04■□□□□ 0.32
NFIX-208ENST00000587260 PURBQ96QR8 312 aaKnown RBP17.04■□□□□ 0.32
NFIX-208ENST00000587260 BEGAINQ9BUH8 593 aa17.04■□□□□ 0.32
NFIX-208ENST00000587260 CFHR5Q9BXR6 569 aa17.04■□□□□ 0.32
NFIX-208ENST00000587260 CYP39A1Q9NYL5 469 aa17.04■□□□□ 0.32
NFIX-208ENST00000587260 RTEL1Q9NZ71 1219 aa17.04■□□□□ 0.32
NFIX-208ENST00000587260 COL20A1Q9P218 1284 aa17.04■□□□□ 0.32
NFIX-208ENST00000587260 CNPY2Q9Y2B0 182 aa17.04■□□□□ 0.32
NFIX-208ENST00000587260 PFASO15067 1338 aa17.03■□□□□ 0.32
NFIX-208ENST00000587260 LRRC37A2A6NM11 1700 aa17.03■□□□□ 0.32
NFIX-208ENST00000587260 MAPK4P31152 587 aa17.03■□□□□ 0.32
NFIX-208ENST00000587260 TOB1P50616 345 aaPredicted RBP17.03■□□□□ 0.32
NFIX-208ENST00000587260 GHRHRQ02643 423 aa17.03■□□□□ 0.32
NFIX-208ENST00000587260 KCTD2Q14681 263 aa17.03■□□□□ 0.32
NFIX-208ENST00000587260 PIK3AP1Q6ZUJ8 805 aa17.03■□□□□ 0.32
NFIX-208ENST00000587260 KRT25Q7Z3Z0 450 aa17.03■□□□□ 0.32
NFIX-208ENST00000587260 SAMD3Q8N6K7 520 aa17.03■□□□□ 0.32
NFIX-208ENST00000587260 USP28Q96RU2 1077 aa17.03■□□□□ 0.32
NFIX-208ENST00000587260 MAF1Q9H063 256 aa17.03■□□□□ 0.32
NFIX-208ENST00000587260 SAGE1Q9NXZ1 904 aa17.03■□□□□ 0.32
NFIX-208ENST00000587260 TFIP11Q9UBB9 837 aaKnown RBP17.03■□□□□ 0.32
NFIX-208ENST00000587260 IVNS1ABPQ9Y6Y0 642 aa17.03■□□□□ 0.32
NFIX-208ENST00000587260 ELP1O95163 1332 aa17.02■□□□□ 0.32
NFIX-208ENST00000587260 CCDC194A0A1B0GVG4 234 aa17.02■□□□□ 0.32
NFIX-208ENST00000587260 SPDYE3A6NKU9 549 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms