RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 CYP39A1Q9NYL5 469 aa7.58□□□□□ -1.2
NPC1-206ENST00000587223 FLRT1Q9NZU1 646 aa7.58□□□□□ -1.2
NPC1-206ENST00000587223 ADD3Q9UEY8 706 aaKnown RBP7.58□□□□□ -1.2
NPC1-206ENST00000587223 V9GY48 417 aaPredicted RBP7.58□□□□□ -1.2
NPC1-206ENST00000587223 MYH6P13533 1939 aa7.58□□□□□ -1.2
NPC1-206ENST00000587223 PLXNB2O15031 1838 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 RPTORQ8N122 1335 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 hCG_1642624A0A1W2PR95 340 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 CPLX1O14810 134 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 PPP1R11O60927 126 aaPredicted RBP7.57□□□□□ -1.2
NPC1-206ENST00000587223 CFBP00751 764 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 PRKAR2AP13861 404 aaKnown RBP7.57□□□□□ -1.2
NPC1-206ENST00000587223 CALML3P27482 149 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 CNGA1P29973 690 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 RBM25P49756 843 aaKnown RBP7.57□□□□□ -1.2
NPC1-206ENST00000587223 AK2P54819 239 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 RPS6P62753 249 aaKnown RBP7.57□□□□□ -1.2
NPC1-206ENST00000587223 AKAP17AQ02040 695 aaKnown RBP7.57□□□□□ -1.2
NPC1-206ENST00000587223 CNTN2Q02246 1040 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 CACNB2Q08289 660 aaPredicted RBP7.57□□□□□ -1.2
NPC1-206ENST00000587223 STK3Q13188 491 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 CPLX2Q6PUV4 134 aaKnown RBP7.57□□□□□ -1.2
NPC1-206ENST00000587223 ZNF467Q7Z7K2 595 aaPredicted RBP7.57□□□□□ -1.2
NPC1-206ENST00000587223 MSL3Q8N5Y2 521 aaKnown RBP7.57□□□□□ -1.2
NPC1-206ENST00000587223 FAM133AQ8N9E0 248 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 TBC1D5Q92609 795 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 IL17RAQ96F46 866 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 MPHOSPH6Q99547 160 aaKnown RBP7.57□□□□□ -1.2
NPC1-206ENST00000587223 TINF2Q9BSI4 451 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 BACH2Q9BYV9 841 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 MAF1Q9H063 256 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 UNC93B1Q9H1C4 597 aa7.57□□□□□ -1.2
NPC1-206ENST00000587223 SLKQ9H2G2 1235 aaPredicted RBP7.57□□□□□ -1.2
NPC1-206ENST00000587223 FAM217BQ9NTX9 383 aaPredicted RBP7.57□□□□□ -1.2
NPC1-206ENST00000587223 SOWAHBA6NEL2 793 aa7.56□□□□□ -1.2
NPC1-206ENST00000587223 ASB14A6NK59 587 aa7.56□□□□□ -1.2
NPC1-206ENST00000587223 B4DLN1 442 aa7.56□□□□□ -1.2
NPC1-206ENST00000587223 GCOM1H8Y6P7 765 aaPredicted RBP7.56□□□□□ -1.2
NPC1-206ENST00000587223 TFRCP02786 760 aaKnown RBP7.56□□□□□ -1.2
NPC1-206ENST00000587223 GJB1P08034 283 aa7.56□□□□□ -1.2
NPC1-206ENST00000587223 POLR2MP0CAP2 368 aa7.56□□□□□ -1.2
NPC1-206ENST00000587223 MRPL12P52815 198 aaKnown RBP7.56□□□□□ -1.2
NPC1-206ENST00000587223 SOX10P56693 466 aa7.56□□□□□ -1.2
NPC1-206ENST00000587223 PRAMEF19Q5SWL8 479 aa7.56□□□□□ -1.2
NPC1-206ENST00000587223 MAP3K21Q5TCX8 1036 aa7.56□□□□□ -1.2
NPC1-206ENST00000587223 MAMDC4Q6UXC1 1216 aa7.56□□□□□ -1.2
NPC1-206ENST00000587223 NOL8Q76FK4 1167 aaKnown RBP7.56□□□□□ -1.2
NPC1-206ENST00000587223 HEATR3Q7Z4Q2 680 aa7.56□□□□□ -1.2
NPC1-206ENST00000587223 SAMD3Q8N6K7 520 aa7.56□□□□□ -1.2
NPC1-206ENST00000587223 DEFB118Q96PH6 123 aa7.56□□□□□ -1.2
NPC1-206ENST00000587223 PURBQ96QR8 312 aaKnown RBP7.56□□□□□ -1.2
NPC1-206ENST00000587223 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.56□□□□□ -1.2
NPC1-206ENST00000587223 NCOA5Q9HCD5 579 aaKnown RBP7.56□□□□□ -1.2
NPC1-206ENST00000587223 MAP3K20Q9NYL2 800 aaKnown RBP7.56□□□□□ -1.2
NPC1-206ENST00000587223 RBM27Q9P2N5 1060 aaKnown RBP7.56□□□□□ -1.2
NPC1-206ENST00000587223 CNPY2Q9Y2B0 182 aa7.56□□□□□ -1.2
NPC1-206ENST00000587223 STK24Q9Y6E0 443 aa7.56□□□□□ -1.2
NPC1-206ENST00000587223 KIAA0100Q14667 2235 aaKnown RBP7.56□□□□□ -1.2
NPC1-206ENST00000587223 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.55□□□□□ -1.2
NPC1-206ENST00000587223 PRPF3O43395 683 aaKnown RBP7.55□□□□□ -1.2
NPC1-206ENST00000587223 GTPBP6O43824 516 aaPredicted RBP7.55□□□□□ -1.2
NPC1-206ENST00000587223 PPFIA3O75145 1194 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 SGPL1O95470 568 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 SNAI1O95863 264 aaPredicted RBP7.55□□□□□ -1.2
NPC1-206ENST00000587223 IGHA2P01877 340 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 CHRM1P11229 460 aaPredicted RBP7.55□□□□□ -1.2
NPC1-206ENST00000587223 IFNAR1P17181 557 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 CCND3P30281 292 aaPredicted RBP7.55□□□□□ -1.2
NPC1-206ENST00000587223 HOXA13P31271 388 aaPredicted RBP7.55□□□□□ -1.2
NPC1-206ENST00000587223 SSRP1Q08945 709 aaKnown RBP7.55□□□□□ -1.2
NPC1-206ENST00000587223 FUT2Q10981 343 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 RABEP1Q15276 862 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 NTRK3Q16288 839 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 ARHGEF16Q5VV41 709 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 SLC30A10Q6XR72 485 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 ARMCX2Q7L311 632 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 FCHSD1Q86WN1 690 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 TRIM22Q8IYM9 498 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 DNERQ8NFT8 737 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 SMARCC2Q8TAQ2 1214 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 SYTL5Q8TDW5 730 aaPredicted RBP7.55□□□□□ -1.2
NPC1-206ENST00000587223 CUL5Q93034 780 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 PHKBQ93100 1093 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 ZFP91Q96JP5 570 aaPredicted RBP7.55□□□□□ -1.2
NPC1-206ENST00000587223 TAAR1Q96RJ0 339 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 RMDN3Q96TC7 470 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 KIF2CQ99661 725 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 SLC26A6Q9BXS9 759 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 ABHD16BQ9H3Z7 469 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 PSTPIP2Q9H939 334 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.55□□□□□ -1.2
NPC1-206ENST00000587223 NRBP1Q9UHY1 535 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 TPCN1Q9ULQ1 816 aa7.55□□□□□ -1.2
NPC1-206ENST00000587223 CNTNAP5Q8WYK1 1306 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 SYNGAP1Q96PV0 1343 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 PLXNA1Q9UIW2 1896 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 LOC102724159A0A0B4J2E5 919 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 POTEFA5A3E0 1075 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 SMCO2A6NFE2 343 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 hCG_1984214I3L0E3 225 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms