RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 ATP11BQ9Y2G3 1177 aa23.54■■□□□ 1.36
VAT1-203ENST00000587062 Q9Y3F1 56 aa23.54■■□□□ 1.36
VAT1-203ENST00000587062 TAF6LQ9Y6J9 622 aa23.54■■□□□ 1.36
VAT1-203ENST00000587062 CST5P28325 142 aaPredicted RBP23.53■■□□□ 1.36
VAT1-203ENST00000587062 LIFRP42702 1097 aa23.53■■□□□ 1.36
VAT1-203ENST00000587062 ANTXR2P58335 489 aa23.53■■□□□ 1.36
VAT1-203ENST00000587062 RTP1P59025 263 aa23.53■■□□□ 1.36
VAT1-203ENST00000587062 C1orf53Q5VUE5 145 aa23.53■■□□□ 1.36
VAT1-203ENST00000587062 SLC30A10Q6XR72 485 aa23.53■■□□□ 1.36
VAT1-203ENST00000587062 EEPD1Q7L9B9 569 aa23.53■■□□□ 1.36
VAT1-203ENST00000587062 ZNF654Q8IZM8 581 aa23.53■■□□□ 1.36
VAT1-203ENST00000587062 VTI1AQ96AJ9 217 aa23.53■■□□□ 1.36
VAT1-203ENST00000587062 NEK1Q96PY6 1258 aa23.53■■□□□ 1.36
VAT1-203ENST00000587062 LBHD1Q9BQE6 289 aaPredicted RBP23.53■■□□□ 1.36
VAT1-203ENST00000587062 STARD7Q9NQZ5 370 aa23.53■■□□□ 1.36
VAT1-203ENST00000587062 PCDHA1Q9Y5I3 950 aa23.53■■□□□ 1.36
VAT1-203ENST00000587062 MYH6P13533 1939 aa23.53■■□□□ 1.36
VAT1-203ENST00000587062 MCM3APO60318 1980 aa23.52■■□□□ 1.36
VAT1-203ENST00000587062 A0A1W2PPC1 479 aa23.52■■□□□ 1.36
VAT1-203ENST00000587062 REC8O95072 547 aa23.52■■□□□ 1.36
VAT1-203ENST00000587062 HMGB1P09429 215 aaKnown RBP23.52■■□□□ 1.36
VAT1-203ENST00000587062 ACLYP53396 1101 aa23.52■■□□□ 1.36
VAT1-203ENST00000587062 KCNA10Q16322 511 aa23.52■■□□□ 1.36
VAT1-203ENST00000587062 HOMER1Q86YM7 354 aa23.52■■□□□ 1.36
VAT1-203ENST00000587062 KLHDC9Q8NEP7 349 aa23.52■■□□□ 1.36
VAT1-203ENST00000587062 NSUN6Q8TEA1 469 aaKnown RBP23.52■■□□□ 1.36
VAT1-203ENST00000587062 KATNBL1Q9H079 304 aa23.52■■□□□ 1.36
VAT1-203ENST00000587062 UPF3AQ9H1J1 476 aaKnown RBP23.52■■□□□ 1.36
VAT1-203ENST00000587062 RIOX1Q9H6W3 641 aa23.52■■□□□ 1.36
VAT1-203ENST00000587062 LY9Q9HBG7 655 aa23.52■■□□□ 1.36
VAT1-203ENST00000587062 ALPK3Q96L96 1907 aa23.52■■□□□ 1.36
VAT1-203ENST00000587062 A0A1W2PQ45 241 aaPredicted RBP23.51■■□□□ 1.35
VAT1-203ENST00000587062 A0A1W2PQY0 241 aa23.51■■□□□ 1.35
VAT1-203ENST00000587062 SYN1P17600 705 aa23.51■■□□□ 1.35
VAT1-203ENST00000587062 SMARCA1P28370 1054 aa23.51■■□□□ 1.35
VAT1-203ENST00000587062 BRDTQ58F21 947 aaPredicted RBP23.51■■□□□ 1.35
VAT1-203ENST00000587062 LENG1Q96BZ8 264 aaPredicted RBP23.51■■□□□ 1.35
VAT1-203ENST00000587062 MTMR8Q96EF0 704 aa23.51■■□□□ 1.35
VAT1-203ENST00000587062 SLC12A7Q9Y666 1083 aa23.51■■□□□ 1.35
VAT1-203ENST00000587062 PNMA6FA0A0J9YX94 578 aa23.5■■□□□ 1.35
VAT1-203ENST00000587062 SH2B2O14492 632 aaPredicted RBP23.5■■□□□ 1.35
VAT1-203ENST00000587062 CABYRO75952 493 aa23.5■■□□□ 1.35
VAT1-203ENST00000587062 CFBP00751 764 aa23.5■■□□□ 1.35
VAT1-203ENST00000587062 TSGA10IPQ3SY00 556 aa23.5■■□□□ 1.35
VAT1-203ENST00000587062 FBXO16Q8IX29 292 aaPredicted RBP23.5■■□□□ 1.35
VAT1-203ENST00000587062 RRP36Q96EU6 259 aaKnown RBP23.5■■□□□ 1.35
VAT1-203ENST00000587062 PURBQ96QR8 312 aaKnown RBP23.5■■□□□ 1.35
VAT1-203ENST00000587062 IWS1Q96ST2 819 aa23.5■■□□□ 1.35
VAT1-203ENST00000587062 SEC63Q9UGP8 760 aaKnown RBP23.5■■□□□ 1.35
VAT1-203ENST00000587062 ELP1O95163 1332 aa23.5■■□□□ 1.35
VAT1-203ENST00000587062 NKRFO15226 690 aaKnown RBP eCLIP23.49■■□□□ 1.35
VAT1-203ENST00000587062 ASGR1P07306 291 aa23.49■■□□□ 1.35
VAT1-203ENST00000587062 BMP8BP34820 402 aa23.49■■□□□ 1.35
VAT1-203ENST00000587062 SNX17Q15036 470 aa23.49■■□□□ 1.35
VAT1-203ENST00000587062 ARHGEF16Q5VV41 709 aa23.49■■□□□ 1.35
VAT1-203ENST00000587062 TAPT1Q6NXT6 567 aa23.49■■□□□ 1.35
VAT1-203ENST00000587062 TLK2Q86UE8 772 aa23.49■■□□□ 1.35
VAT1-203ENST00000587062 PIGSQ96S52 555 aa23.49■■□□□ 1.35
VAT1-203ENST00000587062 WDR11Q9BZH6 1224 aa23.49■■□□□ 1.35
VAT1-203ENST00000587062 SENP2Q9HC62 589 aa23.49■■□□□ 1.35
VAT1-203ENST00000587062 RBM27Q9P2N5 1060 aaKnown RBP23.49■■□□□ 1.35
VAT1-203ENST00000587062 MROH7Q68CQ1 1323 aa23.49■■□□□ 1.35
VAT1-203ENST00000587062 DCDC2CA8MYV0 355 aa23.48■■□□□ 1.35
VAT1-203ENST00000587062 DYNC1LI2O43237 492 aaPredicted RBP23.48■■□□□ 1.35
VAT1-203ENST00000587062 NKX3-2P78367 333 aa23.48■■□□□ 1.35
VAT1-203ENST00000587062 FGD1P98174 961 aa23.48■■□□□ 1.35
VAT1-203ENST00000587062 STXBP2Q15833 593 aa23.48■■□□□ 1.35
VAT1-203ENST00000587062 DUSP28Q4G0W2 176 aa23.48■■□□□ 1.35
VAT1-203ENST00000587062 DHX32Q7L7V1 743 aaKnown RBP23.48■■□□□ 1.35
VAT1-203ENST00000587062 SYTL5Q8TDW5 730 aaPredicted RBP23.48■■□□□ 1.35
VAT1-203ENST00000587062 SCFD2Q8WU76 684 aa23.48■■□□□ 1.35
VAT1-203ENST00000587062 RMDN3Q96TC7 470 aa23.48■■□□□ 1.35
VAT1-203ENST00000587062 SEZ6LQ9BYH1 1024 aa23.48■■□□□ 1.35
VAT1-203ENST00000587062 GNEQ9Y223 722 aaKnown RBP23.48■■□□□ 1.35
VAT1-203ENST00000587062 ASTN1O14525 1302 aa23.48■■□□□ 1.35
VAT1-203ENST00000587062 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.47■■□□□ 1.35
VAT1-203ENST00000587062 SMPD1P17405 629 aa23.47■■□□□ 1.35
VAT1-203ENST00000587062 TRIM60Q495X7 471 aa23.47■■□□□ 1.35
VAT1-203ENST00000587062 GDF15Q99988 308 aa23.47■■□□□ 1.35
VAT1-203ENST00000587062 SPZ1Q9BXG8 430 aa23.47■■□□□ 1.35
VAT1-203ENST00000587062 PRDM5Q9NQX1 630 aaPredicted RBP23.47■■□□□ 1.35
VAT1-203ENST00000587062 PDGFCQ9NRA1 345 aa23.47■■□□□ 1.35
VAT1-203ENST00000587062 GCOM1H8Y6P7 765 aaPredicted RBP23.46■■□□□ 1.35
VAT1-203ENST00000587062 POLR2MP0CAP2 368 aa23.46■■□□□ 1.35
VAT1-203ENST00000587062 EDNRBP24530 442 aa23.46■■□□□ 1.35
VAT1-203ENST00000587062 CPT1AP50416 773 aa23.46■■□□□ 1.35
VAT1-203ENST00000587062 TTLL4Q14679 1199 aa23.46■■□□□ 1.35
VAT1-203ENST00000587062 PPP2R5BQ15173 497 aa23.46■■□□□ 1.35
VAT1-203ENST00000587062 FSCN1Q16658 493 aaKnown RBP23.46■■□□□ 1.35
VAT1-203ENST00000587062 CCSAPQ6IQ19 270 aaPredicted RBP23.46■■□□□ 1.35
VAT1-203ENST00000587062 TAAR1Q96RJ0 339 aa23.46■■□□□ 1.35
VAT1-203ENST00000587062 UBE2OQ9C0C9 1292 aaKnown RBP23.46■■□□□ 1.35
VAT1-203ENST00000587062 A0A0U1RQG5 324 aaPredicted RBP23.45■■□□□ 1.34
VAT1-203ENST00000587062 RBM47A0AV96 593 aaKnown RBP23.45■■□□□ 1.34
VAT1-203ENST00000587062 TLR3O15455 904 aaKnown RBP23.45■■□□□ 1.34
VAT1-203ENST00000587062 EPB41L2O43491 1005 aaKnown RBP23.45■■□□□ 1.34
VAT1-203ENST00000587062 MAGEA10P43363 369 aaPredicted RBP23.45■■□□□ 1.34
VAT1-203ENST00000587062 SGMS1Q86VZ5 419 aa23.45■■□□□ 1.34
VAT1-203ENST00000587062 TBC1D5Q92609 795 aa23.45■■□□□ 1.34
VAT1-203ENST00000587062 TOX2Q96NM4 488 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms