RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 SMARCA1P28370 1054 aa21.08■□□□□ 0.97
RETREG3-205ENST00000586870 ARHGEF6Q15052 776 aa21.08■□□□□ 0.97
RETREG3-205ENST00000586870 NPY5RQ15761 445 aa21.08■□□□□ 0.97
RETREG3-205ENST00000586870 STAG2Q8N3U4 1231 aa21.08■□□□□ 0.97
RETREG3-205ENST00000586870 ERO1AQ96HE7 468 aa21.08■□□□□ 0.97
RETREG3-205ENST00000586870 RTN4Q9NQC3 1192 aaKnown RBP21.08■□□□□ 0.97
RETREG3-205ENST00000586870 HOXC10Q9NYD6 342 aa21.08■□□□□ 0.97
RETREG3-205ENST00000586870 KIAA1468Q9P260 1216 aa21.08■□□□□ 0.97
RETREG3-205ENST00000586870 MTMR7Q9Y216 660 aa21.08■□□□□ 0.97
RETREG3-205ENST00000586870 FLOT1O75955 427 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 HERVK_113P62684 666 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 COG2Q14746 738 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 KIAA1755Q5JYT7 1200 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 SLFN13Q68D06 897 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 C17orf99Q6UX52 265 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 LUZP1Q86V48 1076 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 ANKRD13CQ8N6S4 541 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 GTF3C2Q8WUA4 911 aaPredicted RBP21.07■□□□□ 0.96
RETREG3-205ENST00000586870 CLIC6Q96NY7 704 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 FAM13BQ9NYF5 915 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 SRPRBQ9Y5M8 271 aaKnown RBP21.07■□□□□ 0.96
RETREG3-205ENST00000586870 PHIPQ8WWQ0 1821 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 ECM2O94769 699 aaPredicted RBP21.07■□□□□ 0.96
RETREG3-205ENST00000586870 NDUFB10O96000 172 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 TRAPPC10P48553 1259 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 FAM83BQ5T0W9 1011 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 ELOA2Q8IYF1 753 aaPredicted RBP21.07■□□□□ 0.96
RETREG3-205ENST00000586870 GMCL1P1Q8NEA9 526 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 SPZ1Q9BXG8 430 aa21.07■□□□□ 0.96
RETREG3-205ENST00000586870 PARP1P09874 1014 aaKnown RBP21.06■□□□□ 0.96
RETREG3-205ENST00000586870 GALNT17Q6IS24 598 aa21.06■□□□□ 0.96
RETREG3-205ENST00000586870 MYH8P13535 1937 aa21.05■□□□□ 0.96
RETREG3-205ENST00000586870 PTMAP06454 111 aaKnown RBP21.05■□□□□ 0.96
RETREG3-205ENST00000586870 CLCN1P35523 988 aa21.05■□□□□ 0.96
RETREG3-205ENST00000586870 SLC1A4P43007 532 aa21.05■□□□□ 0.96
RETREG3-205ENST00000586870 ZRSR1Q15695 479 aaKnown RBP21.05■□□□□ 0.96
RETREG3-205ENST00000586870 CCDC148Q8NFR7 591 aa21.05■□□□□ 0.96
RETREG3-205ENST00000586870 CD99L2Q8TCZ2 262 aa21.05■□□□□ 0.96
RETREG3-205ENST00000586870 NUP88Q99567 741 aaPredicted RBP21.05■□□□□ 0.96
RETREG3-205ENST00000586870 PAGR1Q9BTK6 254 aa21.05■□□□□ 0.96
RETREG3-205ENST00000586870 NAT10Q9H0A0 1025 aaKnown RBP21.05■□□□□ 0.96
RETREG3-205ENST00000586870 KCNH3Q9ULD8 1083 aa21.05■□□□□ 0.96
RETREG3-205ENST00000586870 KLRF2D3W0D1 207 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 ATP2B1P20020 1258 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 IKQ13123 557 aaPredicted RBP21.04■□□□□ 0.96
RETREG3-205ENST00000586870 IQCB1Q15051 598 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 EARS2Q5JPH6 523 aaKnown RBP21.04■□□□□ 0.96
RETREG3-205ENST00000586870 CEP57L1Q8IYX8 460 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 BLIDQ8IZY5 108 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 CTDP1Q9Y5B0 961 aaPredicted RBP21.04■□□□□ 0.96
RETREG3-205ENST00000586870 FAM205CA6NFA0 338 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 AP5Z1O43299 807 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 BCRP11274 1271 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 BMP3P12645 472 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 PLCB2Q00722 1185 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 TTC38Q5R3I4 469 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 C11orf57Q6ZUT1 292 aaPredicted RBP21.04■□□□□ 0.96
RETREG3-205ENST00000586870 DAGLBQ8NCG7 672 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 GPRC5AQ8NFJ5 357 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 PIBF1Q8WXW3 757 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 FERMT2Q96AC1 680 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 PCDHA4Q9UN74 947 aa21.04■□□□□ 0.96
RETREG3-205ENST00000586870 ADGRA2Q96PE1 1338 aa21.03■□□□□ 0.96
RETREG3-205ENST00000586870 GOLGA6L19H0YKK7 550 aa21.03■□□□□ 0.96
RETREG3-205ENST00000586870 CYTH3O43739 400 aa21.03■□□□□ 0.96
RETREG3-205ENST00000586870 LACTBP83111 547 aaPredicted RBP21.03■□□□□ 0.96
RETREG3-205ENST00000586870 FAM110CQ1W6H9 321 aa21.03■□□□□ 0.96
RETREG3-205ENST00000586870 CCDC96Q2M329 555 aa21.03■□□□□ 0.96
RETREG3-205ENST00000586870 SLC35G1Q2M3R5 365 aa21.03■□□□□ 0.96
RETREG3-205ENST00000586870 KRBA2Q6ZNG9 492 aa21.03■□□□□ 0.96
RETREG3-205ENST00000586870 MSNP26038 577 aaKnown RBP21.02■□□□□ 0.96
RETREG3-205ENST00000586870 DSG3P32926 999 aa21.02■□□□□ 0.96
RETREG3-205ENST00000586870 NLRP12P59046 1061 aa21.02■□□□□ 0.96
RETREG3-205ENST00000586870 GMCL1Q96IK5 515 aa21.02■□□□□ 0.96
RETREG3-205ENST00000586870 EFCC1Q9HA90 598 aa21.02■□□□□ 0.96
RETREG3-205ENST00000586870 BARHL2Q9NY43 387 aa21.02■□□□□ 0.96
RETREG3-205ENST00000586870 HOOK1Q9UJC3 728 aaKnown RBP21.02■□□□□ 0.96
RETREG3-205ENST00000586870 TUBE1Q9UJT0 475 aa21.02■□□□□ 0.96
RETREG3-205ENST00000586870 FEM1BQ9UK73 627 aa21.02■□□□□ 0.96
RETREG3-205ENST00000586870 RABGAP1Q9Y3P9 1069 aa21.02■□□□□ 0.96
RETREG3-205ENST00000586870 SPDYE16A6NNV3 312 aaPredicted RBP21.01■□□□□ 0.95
RETREG3-205ENST00000586870 TMEM232C9JQI7 657 aa21.01■□□□□ 0.95
RETREG3-205ENST00000586870 PSMC4P43686 418 aa21.01■□□□□ 0.95
RETREG3-205ENST00000586870 FCGRTP55899 365 aa21.01■□□□□ 0.95
RETREG3-205ENST00000586870 CTU1Q7Z7A3 348 aaKnown RBP21.01■□□□□ 0.95
RETREG3-205ENST00000586870 CCDC12Q8WUD4 166 aaPredicted RBP21.01■□□□□ 0.95
RETREG3-205ENST00000586870 SLF1Q9BQI6 1058 aa21.01■□□□□ 0.95
RETREG3-205ENST00000586870 BPIFA3Q9BQP9 254 aa21.01■□□□□ 0.95
RETREG3-205ENST00000586870 RBPJLQ9UBG7 517 aa21.01■□□□□ 0.95
RETREG3-205ENST00000586870 ZKSCAN5Q9Y2L8 839 aa21.01■□□□□ 0.95
RETREG3-205ENST00000586870 TRIM17Q9Y577 477 aa21.01■□□□□ 0.95
RETREG3-205ENST00000586870 GOLGA8HP0CJ92 632 aa21■□□□□ 0.95
RETREG3-205ENST00000586870 CCNA1P78396 465 aa21■□□□□ 0.95
RETREG3-205ENST00000586870 PLS1Q14651 629 aa21■□□□□ 0.95
RETREG3-205ENST00000586870 ASPRV1Q53RT3 343 aa21■□□□□ 0.95
RETREG3-205ENST00000586870 WWC2Q6AWC2 1192 aa21■□□□□ 0.95
RETREG3-205ENST00000586870 PRPF38AQ8NAV1 312 aaKnown RBP21■□□□□ 0.95
RETREG3-205ENST00000586870 CNNM3Q8NE01 707 aa21■□□□□ 0.95
RETREG3-205ENST00000586870 CHURC1Q8WUH1 139 aa21■□□□□ 0.95
RETREG3-205ENST00000586870 DCAF4Q8WV16 495 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms