RNA–Protein interactions for RNA: ENST00000585595.5

MBD1-211, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-211ENST00000585595 CCDC112Q8NEF3 446 aa17.26■□□□□ 0.35
MBD1-211ENST00000585595 CTAGE1Q96RT6 745 aa17.26■□□□□ 0.35
MBD1-211ENST00000585595 GLT8D2Q9H1C3 349 aa17.26■□□□□ 0.35
MBD1-211ENST00000585595 TMX1Q9H3N1 280 aa17.26■□□□□ 0.35
MBD1-211ENST00000585595 USP17L15C9J2P7 530 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 USP17L13C9JLJ4 530 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 USP17L11C9JVI0 530 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 USP17L18D6R9N7 530 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 USP17L22D6RA61 530 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 USP17L17D6RBQ6 530 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 USP17L19D6RCP7 530 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 USP17L20D6RJB6 530 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 KCNJ6P48051 423 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 USP17L24Q0WX57 530 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 USP17L6PQ6QN14 398 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 FAM151AQ8WW52 585 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 DDX25Q9UHL0 483 aaKnown RBP17.25■□□□□ 0.35
MBD1-211ENST00000585595 KIF13BQ9NQT8 1826 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 TEX33O43247 280 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 RHOBTB3O94955 611 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 SEMA3FQ13275 785 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 NYAP1Q6ZVC0 841 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 ADSSL1Q8N142 457 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 RAB34Q9BZG1 259 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 VPS33BQ9H267 617 aa17.25■□□□□ 0.35
MBD1-211ENST00000585595 ADD3Q9UEY8 706 aaKnown RBP17.25■□□□□ 0.35
MBD1-211ENST00000585595 A0A1W2PRG0 241 aa17.24■□□□□ 0.35
MBD1-211ENST00000585595 BMP3P12645 472 aa17.24■□□□□ 0.35
MBD1-211ENST00000585595 SNAP25P60880 206 aa17.24■□□□□ 0.35
MBD1-211ENST00000585595 IKQ13123 557 aaPredicted RBP17.24■□□□□ 0.35
MBD1-211ENST00000585595 PDIA5Q14554 519 aa17.24■□□□□ 0.35
MBD1-211ENST00000585595 PTPN14Q15678 1187 aa17.24■□□□□ 0.35
MBD1-211ENST00000585595 SPDYE2Q495Y8 402 aa17.24■□□□□ 0.35
MBD1-211ENST00000585595 C7orf25Q9BPX7 421 aa17.24■□□□□ 0.35
MBD1-211ENST00000585595 TRIM9Q9C026 710 aa17.24■□□□□ 0.35
MBD1-211ENST00000585595 ZNRF3Q9ULT6 936 aa17.24■□□□□ 0.35
MBD1-211ENST00000585595 DYNC1I1O14576 645 aa17.23■□□□□ 0.35
MBD1-211ENST00000585595 AMPD3Q01432 767 aa17.23■□□□□ 0.35
MBD1-211ENST00000585595 GRB10Q13322 594 aa17.23■□□□□ 0.35
MBD1-211ENST00000585595 FILIP1LQ4L180 1135 aa17.23■□□□□ 0.35
MBD1-211ENST00000585595 SYDE2Q5VT97 1194 aa17.23■□□□□ 0.35
MBD1-211ENST00000585595 CEP135Q66GS9 1140 aa17.23■□□□□ 0.35
MBD1-211ENST00000585595 NIM1KQ8IY84 436 aa17.23■□□□□ 0.35
MBD1-211ENST00000585595 GIMAP8Q8ND71 665 aaPredicted RBP17.23■□□□□ 0.35
MBD1-211ENST00000585595 AMNQ9BXJ7 453 aa17.23■□□□□ 0.35
MBD1-211ENST00000585595 CNTNAP1P78357 1384 aa17.23■□□□□ 0.35
MBD1-211ENST00000585595 PSDA5PKW4 1024 aaPredicted RBP17.23■□□□□ 0.35
MBD1-211ENST00000585595 POTEMA6NI47 508 aa17.23■□□□□ 0.35
MBD1-211ENST00000585595 RIOK3O14730 519 aaKnown RBP17.23■□□□□ 0.35
MBD1-211ENST00000585595 GCFC2P16383 781 aaKnown RBP17.23■□□□□ 0.35
MBD1-211ENST00000585595 HAS1Q92839 578 aa17.23■□□□□ 0.35
MBD1-211ENST00000585595 CCDC47Q96A33 483 aaKnown RBP17.23■□□□□ 0.35
MBD1-211ENST00000585595 PKNOX2Q96KN3 472 aa17.23■□□□□ 0.35
MBD1-211ENST00000585595 PNMA5Q96PV4 448 aa17.23■□□□□ 0.35
MBD1-211ENST00000585595 VEZTQ9HBM0 779 aa17.23■□□□□ 0.35
MBD1-211ENST00000585595 ADKP55263 362 aaKnown RBP17.22■□□□□ 0.35
MBD1-211ENST00000585595 TC2NQ8N9U0 490 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 CDK5RAP3Q96JB5 506 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 LIMA1Q9UHB6 759 aaKnown RBP17.22■□□□□ 0.35
MBD1-211ENST00000585595 H7C1D1 291 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 MARCH6O60337 910 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 GTF2F1P35269 517 aaKnown RBP eCLIP17.22■□□□□ 0.35
MBD1-211ENST00000585595 ASIC1P78348 528 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 PDE4DQ08499 809 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 STIM1Q13586 685 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 KRT31Q15323 416 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 SV2BQ7L1I2 683 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 FBXO11Q86XK2 927 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 SPICE1Q8N0Z3 855 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 AGBL3Q8NEM8 1001 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 PPP1R13BQ96KQ4 1090 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 NAP1L4Q99733 375 aaKnown RBP17.22■□□□□ 0.35
MBD1-211ENST00000585595 ANO3Q9BYT9 981 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 BLOC1S4Q9NUP1 217 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 PIM2Q9P1W9 311 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 SYNPO2Q9UMS6 1093 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 PAXBP1Q9Y5B6 917 aa17.22■□□□□ 0.35
MBD1-211ENST00000585595 TRIM49BA6NDI0 452 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 LRRC10BA6NIK2 292 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 MEIS2O14770 477 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 PBX1P40424 430 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 ECE1P42892 770 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 SPAG1Q07617 926 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 USH1GQ495M9 461 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 TCP11X2Q5H9J9 407 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 KRT79Q5XKE5 535 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 BTNL9Q6UXG8 535 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 TMEM139Q8IV31 216 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 SNX29Q8TEQ0 813 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 ZNF592Q92610 1267 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 NUDT12Q9BQG2 462 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 ARHGEF10LQ9HCE6 1279 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 EXOC1Q9NV70 894 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 STK17AQ9UEE5 414 aa17.21■□□□□ 0.35
MBD1-211ENST00000585595 KCNJ18B7U540 433 aa17.21■□□□□ 0.34
MBD1-211ENST00000585595 PSMA7O14818 248 aa17.21■□□□□ 0.34
MBD1-211ENST00000585595 CCT6AP40227 531 aaKnown RBP17.21■□□□□ 0.34
MBD1-211ENST00000585595 USP11P51784 963 aa17.21■□□□□ 0.34
MBD1-211ENST00000585595 PMS1P54277 932 aaKnown RBP17.21■□□□□ 0.34
MBD1-211ENST00000585595 KCNJ12Q14500 433 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms