RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 MCF2L2Q86YR7 1114 aa16.34■□□□□ 0.21
MKS1-213ENST00000585134 FAM133AQ8N9E0 248 aa16.34■□□□□ 0.21
MKS1-213ENST00000585134 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.34■□□□□ 0.21
MKS1-213ENST00000585134 RNF208Q9H0X6 261 aa16.34■□□□□ 0.21
MKS1-213ENST00000585134 ALDH8A1Q9H2A2 487 aaPredicted RBP16.34■□□□□ 0.21
MKS1-213ENST00000585134 V9GY48 417 aaPredicted RBP16.34■□□□□ 0.21
MKS1-213ENST00000585134 OPLAHO14841 1288 aa16.33■□□□□ 0.2
MKS1-213ENST00000585134 CNGA1P29973 690 aa16.33■□□□□ 0.2
MKS1-213ENST00000585134 CCND3P30281 292 aaPredicted RBP16.33■□□□□ 0.2
MKS1-213ENST00000585134 HOXA13P31271 388 aaPredicted RBP16.33■□□□□ 0.2
MKS1-213ENST00000585134 AKAP17AQ02040 695 aaKnown RBP16.33■□□□□ 0.2
MKS1-213ENST00000585134 SCRN1Q12765 414 aa16.33■□□□□ 0.2
MKS1-213ENST00000585134 PPP2R5BQ15173 497 aa16.33■□□□□ 0.2
MKS1-213ENST00000585134 PRAMEF19Q5SWL8 479 aa16.33■□□□□ 0.2
MKS1-213ENST00000585134 WWC2Q6AWC2 1192 aa16.33■□□□□ 0.2
MKS1-213ENST00000585134 CPLX2Q6PUV4 134 aaKnown RBP16.33■□□□□ 0.2
MKS1-213ENST00000585134 NECAB1Q8N987 351 aa16.33■□□□□ 0.2
MKS1-213ENST00000585134 TINF2Q9BSI4 451 aa16.33■□□□□ 0.2
MKS1-213ENST00000585134 ZHX1Q9UKY1 873 aaPredicted RBP16.33■□□□□ 0.2
MKS1-213ENST00000585134 DIS3Q9Y2L1 958 aaKnown RBP16.33■□□□□ 0.2
MKS1-213ENST00000585134 ASTN1O14525 1302 aa16.33■□□□□ 0.2
MKS1-213ENST00000585134 LRRC37A2A6NM11 1700 aa16.33■□□□□ 0.2
MKS1-213ENST00000585134 MCM3APO60318 1980 aa16.32■□□□□ 0.2
MKS1-213ENST00000585134 ALDH5A1P51649 535 aaPredicted RBP16.32■□□□□ 0.2
MKS1-213ENST00000585134 NAPAP54920 295 aa16.32■□□□□ 0.2
MKS1-213ENST00000585134 ARMCX2Q7L311 632 aa16.32■□□□□ 0.2
MKS1-213ENST00000585134 SYTL5Q8TDW5 730 aaPredicted RBP16.32■□□□□ 0.2
MKS1-213ENST00000585134 TMEM106CQ9BVX2 250 aa16.32■□□□□ 0.2
MKS1-213ENST00000585134 HMX1Q9NP08 348 aaPredicted RBP16.32■□□□□ 0.2
MKS1-213ENST00000585134 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.32■□□□□ 0.2
MKS1-213ENST00000585134 COL20A1Q9P218 1284 aa16.32■□□□□ 0.2
MKS1-213ENST00000585134 GCOM1H8Y6P7 765 aaPredicted RBP16.31■□□□□ 0.2
MKS1-213ENST00000585134 PFKFB2O60825 505 aa16.31■□□□□ 0.2
MKS1-213ENST00000585134 POLR2MP0CAP2 368 aa16.31■□□□□ 0.2
MKS1-213ENST00000585134 IFNAR1P17181 557 aa16.31■□□□□ 0.2
MKS1-213ENST00000585134 NTRK3Q16288 839 aa16.31■□□□□ 0.2
MKS1-213ENST00000585134 ME3Q16798 604 aa16.31■□□□□ 0.2
MKS1-213ENST00000585134 MAP3K21Q5TCX8 1036 aa16.31■□□□□ 0.2
MKS1-213ENST00000585134 FCHSD1Q86WN1 690 aa16.31■□□□□ 0.2
MKS1-213ENST00000585134 TRPV1Q8NER1 839 aa16.31■□□□□ 0.2
MKS1-213ENST00000585134 ADD3Q9UEY8 706 aaKnown RBP16.31■□□□□ 0.2
MKS1-213ENST00000585134 RPTORQ8N122 1335 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 SYNGAP1Q96PV0 1343 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 POTEFA5A3E0 1075 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 STXBP3O00186 592 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 CYBAP13498 195 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 SCG2P13521 617 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 EIF2AK2P19525 551 aaKnown RBP16.3■□□□□ 0.2
MKS1-213ENST00000585134 SSRP1Q08945 709 aaKnown RBP16.3■□□□□ 0.2
MKS1-213ENST00000585134 UBE2SQ16763 222 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 ANO1Q5XXA6 986 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 EEPD1Q7L9B9 569 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 ZNF467Q7Z7K2 595 aaPredicted RBP16.3■□□□□ 0.2
MKS1-213ENST00000585134 TRIM22Q8IYM9 498 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 RGS22Q8NE09 1264 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 CUL5Q93034 780 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 GTF3C6Q969F1 213 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 DEFB118Q96PH6 123 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 TAAR1Q96RJ0 339 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 RNF26Q9BY78 433 aaPredicted RBP16.3■□□□□ 0.2
MKS1-213ENST00000585134 CNPY2Q9Y2B0 182 aa16.3■□□□□ 0.2
MKS1-213ENST00000585134 ASB14A6NK59 587 aa16.29■□□□□ 0.2
MKS1-213ENST00000585134 PRPF3O43395 683 aaKnown RBP16.29■□□□□ 0.2
MKS1-213ENST00000585134 ST18O60284 1047 aa16.29■□□□□ 0.2
MKS1-213ENST00000585134 CDKL5O76039 1030 aa16.29■□□□□ 0.2
MKS1-213ENST00000585134 HSD17B4P51659 736 aa16.29■□□□□ 0.2
MKS1-213ENST00000585134 PFKFB3Q16875 520 aaPredicted RBP16.29■□□□□ 0.2
MKS1-213ENST00000585134 ARHGEF16Q5VV41 709 aa16.29■□□□□ 0.2
MKS1-213ENST00000585134 TYW1BQ6NUM6 668 aa16.29■□□□□ 0.2
MKS1-213ENST00000585134 PPP1R18Q6NYC8 613 aa16.29■□□□□ 0.2
MKS1-213ENST00000585134 USP17L6PQ6QN14 398 aa16.29■□□□□ 0.2
MKS1-213ENST00000585134 CCDC83Q8IWF9 413 aa16.29■□□□□ 0.2
MKS1-213ENST00000585134 FBXO16Q8IX29 292 aaPredicted RBP16.29■□□□□ 0.2
MKS1-213ENST00000585134 SMARCC2Q8TAQ2 1214 aa16.29■□□□□ 0.2
MKS1-213ENST00000585134 RMDN3Q96TC7 470 aa16.29■□□□□ 0.2
MKS1-213ENST00000585134 RBM27Q9P2N5 1060 aaKnown RBP16.29■□□□□ 0.2
MKS1-213ENST00000585134 LIMCH1Q9UPQ0 1083 aa16.29■□□□□ 0.2
MKS1-213ENST00000585134 SNAI1O95863 264 aaPredicted RBP16.28■□□□□ 0.2
MKS1-213ENST00000585134 IGHA2P01877 340 aa16.28■□□□□ 0.2
MKS1-213ENST00000585134 ADCY7P51828 1080 aa16.28■□□□□ 0.2
MKS1-213ENST00000585134 PDE4DQ08499 809 aa16.28■□□□□ 0.2
MKS1-213ENST00000585134 ST3GAL1Q11201 340 aa16.28■□□□□ 0.2
MKS1-213ENST00000585134 PKN1Q16512 942 aa16.28■□□□□ 0.2
MKS1-213ENST00000585134 MAMDC4Q6UXC1 1216 aa16.28■□□□□ 0.2
MKS1-213ENST00000585134 MSL3Q8N5Y2 521 aaKnown RBP16.28■□□□□ 0.2
MKS1-213ENST00000585134 LENG1Q96BZ8 264 aaPredicted RBP16.28■□□□□ 0.2
MKS1-213ENST00000585134 PSTPIP2Q9H939 334 aa16.28■□□□□ 0.2
MKS1-213ENST00000585134 BARHL2Q9NY43 387 aa16.28■□□□□ 0.2
MKS1-213ENST00000585134 VPS54Q9P1Q0 977 aa16.28■□□□□ 0.2
MKS1-213ENST00000585134 FRMPD3Q5JV73 1810 aa16.27■□□□□ 0.2
MKS1-213ENST00000585134 hCG_1984214I3L0E3 225 aa16.27■□□□□ 0.2
MKS1-213ENST00000585134 GJB1P08034 283 aa16.27■□□□□ 0.2
MKS1-213ENST00000585134 EN2P19622 333 aaPredicted RBP16.27■□□□□ 0.2
MKS1-213ENST00000585134 FOSBP53539 338 aa16.27■□□□□ 0.2
MKS1-213ENST00000585134 ACVR2BQ13705 512 aa16.27■□□□□ 0.2
MKS1-213ENST00000585134 ZNF713Q8N859 430 aaPredicted RBP16.27■□□□□ 0.2
MKS1-213ENST00000585134 DNERQ8NFT8 737 aa16.27■□□□□ 0.2
MKS1-213ENST00000585134 U2AF1L4Q8WU68 220 aaKnown RBP16.27■□□□□ 0.2
MKS1-213ENST00000585134 MPHOSPH6Q99547 160 aaKnown RBP16.27■□□□□ 0.2
MKS1-213ENST00000585134 PAK6Q9NQU5 681 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms