RNA–Protein interactions for RNA: ENST00000584604.1

TRAPPC8-212, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-212ENST00000584604 C7orf72A4D263 438 aa8.67□□□□□ -1.02
TRAPPC8-212ENST00000584604 MEFVO15553 781 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC8-212ENST00000584604 PRODHO43272 600 aa8.67□□□□□ -1.02
TRAPPC8-212ENST00000584604 FAM153BP0C7A2 387 aa8.67□□□□□ -1.02
TRAPPC8-212ENST00000584604 MVKQ03426 396 aa8.67□□□□□ -1.02
TRAPPC8-212ENST00000584604 KCNAB2Q13303 367 aa8.67□□□□□ -1.02
TRAPPC8-212ENST00000584604 PRSS53Q2L4Q9 553 aa8.67□□□□□ -1.02
TRAPPC8-212ENST00000584604 IRF2BP1Q8IU81 584 aa8.67□□□□□ -1.02
TRAPPC8-212ENST00000584604 SCUBE1Q8IWY4 988 aa8.67□□□□□ -1.02
TRAPPC8-212ENST00000584604 LILRB2Q8N423 598 aa8.67□□□□□ -1.02
TRAPPC8-212ENST00000584604 THAP3Q8WTV1 239 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC8-212ENST00000584604 SLC6A17Q9H1V8 727 aa8.67□□□□□ -1.02
TRAPPC8-212ENST00000584604 PIF1Q9H611 641 aa8.67□□□□□ -1.02
TRAPPC8-212ENST00000584604 PRKCAP17252 672 aa8.66□□□□□ -1.02
TRAPPC8-212ENST00000584604 ERVFRD-1P60508 538 aa8.66□□□□□ -1.02
TRAPPC8-212ENST00000584604 YOD1Q5VVQ6 348 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC8-212ENST00000584604 MBLAC2Q68D91 279 aa8.66□□□□□ -1.02
TRAPPC8-212ENST00000584604 CPNE8Q86YQ8 564 aa8.66□□□□□ -1.02
TRAPPC8-212ENST00000584604 CCDC103Q8IW40 242 aa8.66□□□□□ -1.02
TRAPPC8-212ENST00000584604 NUP43Q8NFH3 380 aa8.66□□□□□ -1.02
TRAPPC8-212ENST00000584604 DIO2Q92813 273 aa8.66□□□□□ -1.02
TRAPPC8-212ENST00000584604 INTS4Q96HW7 963 aaKnown RBP8.66□□□□□ -1.02
TRAPPC8-212ENST00000584604 SLC26A8Q96RN1 970 aa8.66□□□□□ -1.02
TRAPPC8-212ENST00000584604 PDLIM7Q9NR12 457 aa8.66□□□□□ -1.02
TRAPPC8-212ENST00000584604 TMEFF2Q9UIK5 374 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC8-212ENST00000584604 NPHS1O60500 1241 aa8.65□□□□□ -1.02
TRAPPC8-212ENST00000584604 LTBRP36941 435 aa8.65□□□□□ -1.02
TRAPPC8-212ENST00000584604 CYP4F8P98187 520 aa8.65□□□□□ -1.02
TRAPPC8-212ENST00000584604 KIR3DS1Q14943 382 aa8.65□□□□□ -1.02
TRAPPC8-212ENST00000584604 INF2Q27J81 1249 aa8.65□□□□□ -1.02
TRAPPC8-212ENST00000584604 C2orf27AQ580R0 203 aa8.65□□□□□ -1.02
TRAPPC8-212ENST00000584604 FOXB2Q5VYV0 432 aa8.65□□□□□ -1.02
TRAPPC8-212ENST00000584604 RSPO2Q6UXX9 243 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC8-212ENST00000584604 PPIL6Q8IXY8 311 aa8.65□□□□□ -1.02
TRAPPC8-212ENST00000584604 CCDC163A0A0D9SF12 145 aa8.64□□□□□ -1.03
TRAPPC8-212ENST00000584604 MSL3P1P0C860 447 aa8.64□□□□□ -1.03
TRAPPC8-212ENST00000584604 ARL4AP40617 200 aa8.64□□□□□ -1.03
TRAPPC8-212ENST00000584604 KISS1RQ969F8 398 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC8-212ENST00000584604 TNFRSF12AQ9NP84 129 aa8.64□□□□□ -1.03
TRAPPC8-212ENST00000584604 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.64□□□□□ -1.03
TRAPPC8-212ENST00000584604 TRBV23-1A0A0A0MS06 115 aa8.63□□□□□ -1.03
TRAPPC8-212ENST00000584604 A0A1W2PQ27 194 aa8.63□□□□□ -1.03
TRAPPC8-212ENST00000584604 A0A1W2PQ64 194 aa8.63□□□□□ -1.03
TRAPPC8-212ENST00000584604 A0A1W2PQC6 194 aa8.63□□□□□ -1.03
TRAPPC8-212ENST00000584604 A0A1W2PQD8 194 aa8.63□□□□□ -1.03
TRAPPC8-212ENST00000584604 PPP1R11O60927 126 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC8-212ENST00000584604 NTRK3Q16288 839 aa8.63□□□□□ -1.03
TRAPPC8-212ENST00000584604 ZSWIM2Q8NEG5 633 aa8.63□□□□□ -1.03
TRAPPC8-212ENST00000584604 DCAF4Q8WV16 495 aa8.63□□□□□ -1.03
TRAPPC8-212ENST00000584604 LIN37Q96GY3 246 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC8-212ENST00000584604 CDC6Q99741 560 aa8.63□□□□□ -1.03
TRAPPC8-212ENST00000584604 MTA3Q9BTC8 594 aa8.63□□□□□ -1.03
TRAPPC8-212ENST00000584604 DHRS4Q9BTZ2 278 aa8.63□□□□□ -1.03
TRAPPC8-212ENST00000584604 GPR27Q9NS67 375 aa8.63□□□□□ -1.03
TRAPPC8-212ENST00000584604 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.63□□□□□ -1.03
TRAPPC8-212ENST00000584604 HRKO00198 91 aa8.62□□□□□ -1.03
TRAPPC8-212ENST00000584604 GALK1P51570 392 aa8.62□□□□□ -1.03
TRAPPC8-212ENST00000584604 GTF2A2P52657 109 aa8.62□□□□□ -1.03
TRAPPC8-212ENST00000584604 SUMO1P63165 101 aaKnown RBP8.62□□□□□ -1.03
TRAPPC8-212ENST00000584604 FAM209AQ5JX71 171 aa8.62□□□□□ -1.03
TRAPPC8-212ENST00000584604 NOP9Q86U38 636 aaKnown RBP8.62□□□□□ -1.03
TRAPPC8-212ENST00000584604 SIRT2Q8IXJ6 389 aa8.62□□□□□ -1.03
TRAPPC8-212ENST00000584604 Q8N1Y9 231 aa8.62□□□□□ -1.03
TRAPPC8-212ENST00000584604 RCBTB1Q8NDN9 531 aa8.62□□□□□ -1.03
TRAPPC8-212ENST00000584604 DPF3Q92784 378 aa8.62□□□□□ -1.03
TRAPPC8-212ENST00000584604 EXOC2Q96KP1 924 aa8.62□□□□□ -1.03
TRAPPC8-212ENST00000584604 IPO9Q96P70 1041 aaKnown RBP8.62□□□□□ -1.03
TRAPPC8-212ENST00000584604 TIMM13Q9Y5L4 95 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC8-212ENST00000584604 OR14I1A6ND48 311 aa8.61□□□□□ -1.03
TRAPPC8-212ENST00000584604 SRGAP3O43295 1099 aa8.61□□□□□ -1.03
TRAPPC8-212ENST00000584604 STYK1Q6J9G0 422 aa8.61□□□□□ -1.03
TRAPPC8-212ENST00000584604 MPZL3Q6UWV2 235 aa8.61□□□□□ -1.03
TRAPPC8-212ENST00000584604 LZTR1Q8N653 840 aa8.61□□□□□ -1.03
TRAPPC8-212ENST00000584604 FMNL2Q96PY5 1086 aa8.61□□□□□ -1.03
TRAPPC8-212ENST00000584604 ZFYVE21Q9BQ24 234 aa8.61□□□□□ -1.03
TRAPPC8-212ENST00000584604 PAX4O43316 350 aa8.6□□□□□ -1.03
TRAPPC8-212ENST00000584604 RPL11P62913 178 aaKnown RBP8.6□□□□□ -1.03
TRAPPC8-212ENST00000584604 CBX2Q14781 532 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC8-212ENST00000584604 USP53Q70EK8 1073 aa8.6□□□□□ -1.03
TRAPPC8-212ENST00000584604 PLEKHO2Q8TD55 490 aa8.6□□□□□ -1.03
TRAPPC8-212ENST00000584604 ZNF552Q9H707 407 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC8-212ENST00000584604 GULP1Q9UBP9 304 aa8.6□□□□□ -1.03
TRAPPC8-212ENST00000584604 MRPS23Q9Y3D9 190 aaKnown RBP8.6□□□□□ -1.03
TRAPPC8-212ENST00000584604 PTCH2Q9Y6C5 1203 aa8.6□□□□□ -1.03
TRAPPC8-212ENST00000584604 MYO1BO43795 1136 aa8.59□□□□□ -1.03
TRAPPC8-212ENST00000584604 MPOP05164 745 aa8.59□□□□□ -1.03
TRAPPC8-212ENST00000584604 C6orf222P0C671 652 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC8-212ENST00000584604 GLI4P10075 376 aa8.59□□□□□ -1.03
TRAPPC8-212ENST00000584604 LCP1P13796 627 aa8.59□□□□□ -1.03
TRAPPC8-212ENST00000584604 YBX1P67809 324 aaKnown RBP8.59□□□□□ -1.03
TRAPPC8-212ENST00000584604 ADGRF1Q5T601 910 aa8.59□□□□□ -1.03
TRAPPC8-212ENST00000584604 PRR23BQ6ZRT6 265 aa8.59□□□□□ -1.03
TRAPPC8-212ENST00000584604 MAMDC2Q7Z304 686 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC8-212ENST00000584604 SH3TC2Q8TF17 1288 aa8.59□□□□□ -1.03
TRAPPC8-212ENST00000584604 RWDD3Q9Y3V2 267 aa8.59□□□□□ -1.03
TRAPPC8-212ENST00000584604 LRRC10BA6NIK2 292 aa8.58□□□□□ -1.04
TRAPPC8-212ENST00000584604 ABLIM1O14639 778 aa8.58□□□□□ -1.04
TRAPPC8-212ENST00000584604 IGSF3O75054 1194 aa8.58□□□□□ -1.04
TRAPPC8-212ENST00000584604 CYBBP04839 570 aa8.58□□□□□ -1.04
TRAPPC8-212ENST00000584604 SQSTM1Q13501 440 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms