RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 KCTD2Q14681 263 aa20.99■□□□□ 0.95
RFFL-211ENST00000584541 KIF22Q14807 665 aa20.99■□□□□ 0.95
RFFL-211ENST00000584541 MCTP1Q6DN14 999 aa20.99■□□□□ 0.95
RFFL-211ENST00000584541 DIS3L2Q8IYB7 885 aaKnown RBP20.99■□□□□ 0.95
RFFL-211ENST00000584541 MMP19Q99542 508 aa20.99■□□□□ 0.95
RFFL-211ENST00000584541 R3HDMLQ9H3Y0 253 aa20.99■□□□□ 0.95
RFFL-211ENST00000584541 STRNO43815 780 aa20.98■□□□□ 0.95
RFFL-211ENST00000584541 SP3Q02447 781 aa20.98■□□□□ 0.95
RFFL-211ENST00000584541 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.98■□□□□ 0.95
RFFL-211ENST00000584541 SPDYE3A6NKU9 549 aa20.97■□□□□ 0.95
RFFL-211ENST00000584541 HSD17B4P51659 736 aa20.97■□□□□ 0.95
RFFL-211ENST00000584541 NUCB2P80303 420 aa20.97■□□□□ 0.95
RFFL-211ENST00000584541 GHRHRQ02643 423 aa20.97■□□□□ 0.95
RFFL-211ENST00000584541 UBE2SQ16763 222 aa20.97■□□□□ 0.95
RFFL-211ENST00000584541 USP17L6PQ6QN14 398 aa20.97■□□□□ 0.95
RFFL-211ENST00000584541 GPR142Q7Z601 462 aa20.97■□□□□ 0.95
RFFL-211ENST00000584541 PLEKHH3Q7Z736 793 aa20.97■□□□□ 0.95
RFFL-211ENST00000584541 ABRAQ8N0Z2 381 aa20.97■□□□□ 0.95
RFFL-211ENST00000584541 FOXP1Q9H334 677 aaPredicted RBP20.97■□□□□ 0.95
RFFL-211ENST00000584541 EHMT1Q9H9B1 1298 aa20.97■□□□□ 0.95
RFFL-211ENST00000584541 A1CFQ9NQ94 594 aaKnown RBP20.97■□□□□ 0.95
RFFL-211ENST00000584541 BIN2Q9UBW5 565 aaPredicted RBP20.97■□□□□ 0.95
RFFL-211ENST00000584541 CIZ1Q9ULV3 898 aaPredicted RBP20.97■□□□□ 0.95
RFFL-211ENST00000584541 MTMR6Q9Y217 621 aa20.97■□□□□ 0.95
RFFL-211ENST00000584541 PLXNA1Q9UIW2 1896 aa20.96■□□□□ 0.95
RFFL-211ENST00000584541 BTBD18B2RXH4 712 aa20.96■□□□□ 0.95
RFFL-211ENST00000584541 MEIS2O14770 477 aa20.96■□□□□ 0.95
RFFL-211ENST00000584541 FOSP01100 380 aaPredicted RBP20.96■□□□□ 0.95
RFFL-211ENST00000584541 HOXA13P31271 388 aaPredicted RBP20.96■□□□□ 0.95
RFFL-211ENST00000584541 FCGRTP55899 365 aa20.96■□□□□ 0.95
RFFL-211ENST00000584541 RPS6P62753 249 aaKnown RBP20.96■□□□□ 0.95
RFFL-211ENST00000584541 AP3B2Q13367 1082 aa20.96■□□□□ 0.95
RFFL-211ENST00000584541 BAATQ14032 418 aaPredicted RBP20.96■□□□□ 0.95
RFFL-211ENST00000584541 NPY5RQ15761 445 aa20.96■□□□□ 0.95
RFFL-211ENST00000584541 TBC1D5Q92609 795 aa20.96■□□□□ 0.95
RFFL-211ENST00000584541 WBP1LQ9NX94 342 aa20.96■□□□□ 0.95
RFFL-211ENST00000584541 CYP39A1Q9NYL5 469 aa20.96■□□□□ 0.95
RFFL-211ENST00000584541 ZNF236Q9UL36 1845 aa20.96■□□□□ 0.95
RFFL-211ENST00000584541 CCDC194A0A1B0GVG4 234 aa20.95■□□□□ 0.94
RFFL-211ENST00000584541 GPR25O00155 361 aa20.95■□□□□ 0.94
RFFL-211ENST00000584541 TNPO2O14787 897 aaKnown RBP20.95■□□□□ 0.94
RFFL-211ENST00000584541 PTPREP23469 700 aa20.95■□□□□ 0.94
RFFL-211ENST00000584541 DDIT3P35638 169 aa20.95■□□□□ 0.94
RFFL-211ENST00000584541 CLK2P49760 499 aaKnown RBP20.95■□□□□ 0.94
RFFL-211ENST00000584541 LACTBP83111 547 aaPredicted RBP20.95■□□□□ 0.94
RFFL-211ENST00000584541 NOM1Q5C9Z4 860 aaKnown RBP20.95■□□□□ 0.94
RFFL-211ENST00000584541 JAKMIP3Q5VZ66 844 aa20.95■□□□□ 0.94
RFFL-211ENST00000584541 SLC30A10Q6XR72 485 aa20.95■□□□□ 0.94
RFFL-211ENST00000584541 KRT25Q7Z3Z0 450 aa20.95■□□□□ 0.94
RFFL-211ENST00000584541 FCHSD1Q86WN1 690 aa20.95■□□□□ 0.94
RFFL-211ENST00000584541 PCDHA6Q9UN73 950 aa20.95■□□□□ 0.94
RFFL-211ENST00000584541 PCDHA8Q9Y5H6 950 aa20.95■□□□□ 0.94
RFFL-211ENST00000584541 SLC15A5A6NIM6 579 aa20.94■□□□□ 0.94
RFFL-211ENST00000584541 POTEB2H3BUK9 544 aa20.94■□□□□ 0.94
RFFL-211ENST00000584541 ZSCAN22P10073 491 aaPredicted RBP20.94■□□□□ 0.94
RFFL-211ENST00000584541 NR5A1Q13285 461 aa20.94■□□□□ 0.94
RFFL-211ENST00000584541 RASGRP4Q8TDF6 673 aa20.94■□□□□ 0.94
RFFL-211ENST00000584541 OXER1Q8TDS5 423 aa20.94■□□□□ 0.94
RFFL-211ENST00000584541 SYTL5Q8TDW5 730 aaPredicted RBP20.94■□□□□ 0.94
RFFL-211ENST00000584541 ZSCAN16Q9H4T2 348 aaPredicted RBP20.94■□□□□ 0.94
RFFL-211ENST00000584541 TMEM260Q9NX78 707 aa20.94■□□□□ 0.94
RFFL-211ENST00000584541 LCTP09848 1927 aa20.94■□□□□ 0.94
RFFL-211ENST00000584541 MYH15Q9Y2K3 1946 aa20.94■□□□□ 0.94
RFFL-211ENST00000584541 M0R2N6 131 aa20.93■□□□□ 0.94
RFFL-211ENST00000584541 FKTNO75072 461 aa20.93■□□□□ 0.94
RFFL-211ENST00000584541 ECM2O94769 699 aaPredicted RBP20.93■□□□□ 0.94
RFFL-211ENST00000584541 U2AF2P26368 475 aaKnown RBP eCLIP20.93■□□□□ 0.942e-6■■□□□ 12.6
RFFL-211ENST00000584541 PSMC4P43686 418 aa20.93■□□□□ 0.94
RFFL-211ENST00000584541 ARHGEF6Q15052 776 aa20.93■□□□□ 0.94
RFFL-211ENST00000584541 NOSTRINQ8IVI9 506 aa20.93■□□□□ 0.94
RFFL-211ENST00000584541 ERO1AQ96HE7 468 aa20.93■□□□□ 0.94
RFFL-211ENST00000584541 SLC5A4Q9NY91 659 aa20.93■□□□□ 0.94
RFFL-211ENST00000584541 CHMP5Q9NZZ3 219 aa20.93■□□□□ 0.94
RFFL-211ENST00000584541 ADD3Q9UEY8 706 aaKnown RBP20.93■□□□□ 0.94
RFFL-211ENST00000584541 MYH7BA7E2Y1 1941 aa20.93■□□□□ 0.94
RFFL-211ENST00000584541 DOCK3Q8IZD9 2030 aa20.92■□□□□ 0.94
RFFL-211ENST00000584541 PCNTO95613 3336 aa20.92■□□□□ 0.94
RFFL-211ENST00000584541 ADORA2AP29274 412 aa20.92■□□□□ 0.94
RFFL-211ENST00000584541 GRB14Q14449 540 aa20.92■□□□□ 0.94
RFFL-211ENST00000584541 NONOQ15233 471 aaKnown RBP eCLIP20.92■□□□□ 0.94
RFFL-211ENST00000584541 BRAPQ7Z569 592 aa20.92■□□□□ 0.94
RFFL-211ENST00000584541 FERMT3Q86UX7 667 aa20.92■□□□□ 0.94
RFFL-211ENST00000584541 SOCS4Q8WXH5 440 aa20.92■□□□□ 0.94
RFFL-211ENST00000584541 MPHOSPH6Q99547 160 aaKnown RBP20.92■□□□□ 0.94
RFFL-211ENST00000584541 ANO3Q9BYT9 981 aa20.92■□□□□ 0.94
RFFL-211ENST00000584541 ZSWIM8A7E2V4 1837 aa20.92■□□□□ 0.94
RFFL-211ENST00000584541 B4DLN1 442 aa20.91■□□□□ 0.94
RFFL-211ENST00000584541 ADAMTS3O15072 1205 aa20.91■□□□□ 0.94
RFFL-211ENST00000584541 BRD1O95696 1058 aa20.91■□□□□ 0.94
RFFL-211ENST00000584541 F13A1P00488 732 aa20.91■□□□□ 0.94
RFFL-211ENST00000584541 PKP1Q13835 747 aa20.91■□□□□ 0.94
RFFL-211ENST00000584541 FOXD4L5Q5VV16 416 aaPredicted RBP20.91■□□□□ 0.94
RFFL-211ENST00000584541 ARHGEF16Q5VV41 709 aa20.91■□□□□ 0.94
RFFL-211ENST00000584541 PIK3AP1Q6ZUJ8 805 aa20.91■□□□□ 0.94
RFFL-211ENST00000584541 DPP9Q86TI2 863 aa20.91■□□□□ 0.94
RFFL-211ENST00000584541 JMYQ8N9B5 988 aa20.91■□□□□ 0.94
RFFL-211ENST00000584541 DNERQ8NFT8 737 aa20.91■□□□□ 0.94
RFFL-211ENST00000584541 FOXD4L4Q8WXT5 416 aaPredicted RBP20.91■□□□□ 0.94
RFFL-211ENST00000584541 TNFRSF25Q93038 417 aa20.91■□□□□ 0.94
RFFL-211ENST00000584541 RMDN3Q96TC7 470 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms