RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.44	□□□□□ -0.58
NARF-222	ENST00000583908	FAM184B	Q9ULE4	1060 aa		11.44	□□□□□ -0.58
NARF-222	ENST00000583908	NID2	Q14112	1375 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	POTEF	A5A3E0	1075 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	KBTBD13	C9JR72	458 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.43	□□□□□ -0.58
NARF-222	ENST00000583908	CDKL5	O76039	1030 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	CFB	P00751	764 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	POLR2M	P0CAP2	368 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	CCND3	P30281	292 aa	Predicted RBP	11.43	□□□□□ -0.58
NARF-222	ENST00000583908	ALDH5A1	P51649	535 aa	Predicted RBP	11.43	□□□□□ -0.58
NARF-222	ENST00000583908	PDE4D	Q08499	809 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	APOBR	Q0VD83	1088 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	TRIM32	Q13049	653 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	SLC30A10	Q6XR72	485 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	TRIM22	Q8IYM9	498 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	ARRDC4	Q8NCT1	418 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	NSUN6	Q8TEA1	469 aa	Known RBP	11.43	□□□□□ -0.58
NARF-222	ENST00000583908	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.43	□□□□□ -0.58
NARF-222	ENST00000583908	CLEC4D	Q8WXI8	215 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	AGXT2	Q9BYV1	514 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	UPF3B	Q9BZI7	483 aa	Known RBP	11.43	□□□□□ -0.58
NARF-222	ENST00000583908	CRISPLD2	Q9H0B8	497 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	GLT8D2	Q9H1C3	349 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	EHMT1	Q9H9B1	1298 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	VTA1	Q9NP79	307 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	GTF3C3	Q9Y5Q9	886 aa		11.43	□□□□□ -0.58
NARF-222	ENST00000583908	PLXNA1	Q9UIW2	1896 aa		11.42	□□□□□ -0.58
NARF-222	ENST00000583908	CYTH3	O43739	400 aa		11.42	□□□□□ -0.58
NARF-222	ENST00000583908	PLEKHA8P1	O95397	391 aa		11.42	□□□□□ -0.58
NARF-222	ENST00000583908	CPA1	P15085	419 aa		11.42	□□□□□ -0.58
NARF-222	ENST00000583908	EN2	P19622	333 aa	Predicted RBP	11.42	□□□□□ -0.58
NARF-222	ENST00000583908	CNTN2	Q02246	1040 aa		11.42	□□□□□ -0.58
NARF-222	ENST00000583908	ACVR2B	Q13705	512 aa		11.42	□□□□□ -0.58
NARF-222	ENST00000583908	ARHGEF16	Q5VV41	709 aa		11.42	□□□□□ -0.58
NARF-222	ENST00000583908	HEATR3	Q7Z4Q2	680 aa		11.42	□□□□□ -0.58
NARF-222	ENST00000583908	NECAB2	Q7Z6G3	386 aa		11.42	□□□□□ -0.58
NARF-222	ENST00000583908	RNF180	Q86T96	592 aa		11.42	□□□□□ -0.58
NARF-222	ENST00000583908	RAB11FIP4	Q86YS3	637 aa		11.42	□□□□□ -0.58
NARF-222	ENST00000583908	SRBD1	Q8N5C6	995 aa	Known RBP	11.42	□□□□□ -0.58
NARF-222	ENST00000583908	PIBF1	Q8WXW3	757 aa		11.42	□□□□□ -0.58
NARF-222	ENST00000583908	IWS1	Q96ST2	819 aa		11.42	□□□□□ -0.58
NARF-222	ENST00000583908	XPNPEP3	Q9NQH7	507 aa		11.42	□□□□□ -0.58
NARF-222	ENST00000583908	OGDHL	Q9ULD0	1010 aa		11.42	□□□□□ -0.58
NARF-222	ENST00000583908	CNTNAP5	Q8WYK1	1306 aa		11.41	□□□□□ -0.58
NARF-222	ENST00000583908	DNM1L	O00429	736 aa		11.41	□□□□□ -0.58
NARF-222	ENST00000583908	HSD17B4	P51659	736 aa		11.41	□□□□□ -0.58
NARF-222	ENST00000583908	GHRHR	Q02643	423 aa		11.41	□□□□□ -0.58
NARF-222	ENST00000583908	C8orf34	Q49A92	452 aa		11.41	□□□□□ -0.58
NARF-222	ENST00000583908	NOL8	Q76FK4	1167 aa	Known RBP	11.41	□□□□□ -0.58
NARF-222	ENST00000583908	SMARCC2	Q8TAQ2	1214 aa		11.41	□□□□□ -0.58
NARF-222	ENST00000583908	ZNF274	Q96GC6	653 aa	Predicted RBP	11.41	□□□□□ -0.58
NARF-222	ENST00000583908	RMDN3	Q96TC7	470 aa		11.41	□□□□□ -0.58
NARF-222	ENST00000583908	BRPF3	Q9ULD4	1205 aa		11.41	□□□□□ -0.58
NARF-222	ENST00000583908	CENPF	P49454	3210 aa		11.41	□□□□□ -0.58
NARF-222	ENST00000583908	MYH6	P13533	1939 aa		11.41	□□□□□ -0.58
NARF-222	ENST00000583908	KIAA0100	Q14667	2235 aa	Known RBP	11.4	□□□□□ -0.58
NARF-222	ENST00000583908	SOWAHB	A6NEL2	793 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	SPDYE3	A6NKU9	549 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	ZEB2	O60315	1214 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	IGHA2	P01877	340 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	MYCN	P04198	464 aa	Predicted RBP	11.4	□□□□□ -0.58
NARF-222	ENST00000583908	TAL1	P17542	331 aa	Predicted RBP	11.4	□□□□□ -0.58
NARF-222	ENST00000583908	NAPA	P54920	295 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	EVC	P57679	992 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	STXBP2	Q15833	593 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	BRDT	Q58F21	947 aa	Predicted RBP	11.4	□□□□□ -0.58
NARF-222	ENST00000583908	MCTP2	Q6DN12	878 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	CCDC82	Q8N4S0	544 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	CCDC148	Q8NFR7	591 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.4	□□□□□ -0.58
NARF-222	ENST00000583908	MORC4	Q8TE76	937 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	SHISA4	Q96DD7	197 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	IL17RA	Q96F46	866 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	RNF26	Q9BY78	433 aa	Predicted RBP	11.4	□□□□□ -0.58
NARF-222	ENST00000583908	AP5M1	Q9H0R1	490 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	SLK	Q9H2G2	1235 aa	Predicted RBP	11.4	□□□□□ -0.58
NARF-222	ENST00000583908	C11orf49	Q9H6J7	331 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	PSTPIP2	Q9H939	334 aa		11.4	□□□□□ -0.58
NARF-222	ENST00000583908	NKRF	O15226	690 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
NARF-222	ENST00000583908	PPP1R11	O60927	126 aa	Predicted RBP	11.39	□□□□□ -0.59
NARF-222	ENST00000583908	DUSP11	O75319	330 aa	Known RBP	11.39	□□□□□ -0.59
NARF-222	ENST00000583908	STAM2	O75886	525 aa		11.39	□□□□□ -0.59
NARF-222	ENST00000583908	SNAI1	O95863	264 aa	Predicted RBP	11.39	□□□□□ -0.59
NARF-222	ENST00000583908	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.39	□□□□□ -0.59
NARF-222	ENST00000583908	XBP1	P17861	261 aa		11.39	□□□□□ -0.59
NARF-222	ENST00000583908	PDIA3	P30101	505 aa	Known RBP	11.39	□□□□□ -0.59
NARF-222	ENST00000583908	CCND2	P30279	289 aa		11.39	□□□□□ -0.59
NARF-222	ENST00000583908	ADCY7	P51828	1080 aa		11.39	□□□□□ -0.59
NARF-222	ENST00000583908	TNFAIP2	Q03169	654 aa		11.39	□□□□□ -0.59
NARF-222	ENST00000583908	CCDC144B	Q3MJ40	725 aa		11.39	□□□□□ -0.59
NARF-222	ENST00000583908	GNPTAB	Q3T906	1256 aa		11.39	□□□□□ -0.59
NARF-222	ENST00000583908	PRAMEF19	Q5SWL8	479 aa		11.39	□□□□□ -0.59
NARF-222	ENST00000583908	LHX8	Q68G74	356 aa		11.39	□□□□□ -0.59
NARF-222	ENST00000583908	IQSEC1	Q6DN90	963 aa		11.39	□□□□□ -0.59
NARF-222	ENST00000583908	KCNV1	Q6PIU1	500 aa		11.39	□□□□□ -0.59
NARF-222	ENST00000583908	FBXO16	Q8IX29	292 aa	Predicted RBP	11.39	□□□□□ -0.59
NARF-222	ENST00000583908	CMTR1	Q8N1G2	835 aa	Known RBP	11.39	□□□□□ -0.59
NARF-222	ENST00000583908	PCSK9	Q8NBP7	692 aa	Known RBP	11.39	□□□□□ -0.59
NARF-222	ENST00000583908	TRPV1	Q8NER1	839 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms