RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 GPKOWQ92917 476 aaPredicted RBP eCLIP10.52□□□□□ -0.73
CASC3-209ENST00000583902 TNFRSF25Q93038 417 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 AIFM3Q96NN9 605 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 ASCC2Q9H1I8 757 aaPredicted RBP10.52□□□□□ -0.73
CASC3-209ENST00000583902 MROH8Q9H579 483 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 RCOR1Q9UKL0 485 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 PCDHA6Q9UN73 950 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 KCNJ14Q9UNX9 436 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 PCDHA8Q9Y5H6 950 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 ZNF536O15090 1300 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 PPP1R11O60927 126 aaPredicted RBP10.51□□□□□ -0.73
CASC3-209ENST00000583902 PPP6R2O75170 966 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 HSD17B4P51659 736 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 APLP1P51693 650 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 HERVK_113P62684 666 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 NOGQ13253 232 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 MOGSQ13724 837 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 ARL6IP4Q66PJ3 421 aaKnown RBP10.51□□□□□ -0.73
CASC3-209ENST00000583902 PPP4R3AQ6IN85 833 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 GPAT2Q6NUI2 795 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 RASGRP2Q7LDG7 609 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 FERMT3Q86UX7 667 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 PIBF1Q8WXW3 757 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 COA7Q96BR5 231 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 ATG4CQ96DT6 458 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 MPHOSPH6Q99547 160 aaKnown RBP10.51□□□□□ -0.73
CASC3-209ENST00000583902 CPVLQ9H3G5 476 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 ACAD9Q9H845 621 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 FBXO28Q9NVF7 368 aa10.51□□□□□ -0.73
CASC3-209ENST00000583902 ZNF214Q9UL59 606 aaPredicted RBP10.51□□□□□ -0.73
CASC3-209ENST00000583902 ABT1Q9ULW3 272 aaKnown RBP10.51□□□□□ -0.73
CASC3-209ENST00000583902 hCG_1642624A0A1W2PR95 340 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 RASSF10A6NK89 507 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 PDHXO00330 501 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 STRNO43815 780 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 PPFIA3O75145 1194 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 STAM2O75886 525 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 CYP3A4P08684 503 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 MCM4P33991 863 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 GJA5P36382 358 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 PRPHP41219 470 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 TM4SF4P48230 202 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 GUCY1B3Q02153 619 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 DNM1Q05193 864 aaKnown RBP10.5□□□□□ -0.73
CASC3-209ENST00000583902 SLC39A14Q15043 492 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 TREML2Q5T2D2 321 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 ANO1Q5XXA6 986 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 TYW1BQ6NUM6 668 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 CCDC174Q6PII3 467 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 NEK8Q86SG6 692 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 SMCR8Q8TEV9 937 aaPredicted RBP10.5□□□□□ -0.73
CASC3-209ENST00000583902 FERMT2Q96AC1 680 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 SPATA32Q96LK8 384 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 TRERF1Q96PN7 1200 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 P2RX7Q99572 595 aaKnown RBP10.5□□□□□ -0.73
CASC3-209ENST00000583902 SPATC1LQ9H0A9 340 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 MORF4L1Q9UBU8 362 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 STK24Q9Y6E0 443 aa10.5□□□□□ -0.73
CASC3-209ENST00000583902 GOLGA6L4A6NEF3 574 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 KIF28PB7ZC32 967 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 BTBD19C9JJ37 291 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 MEIS2O14770 477 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 TBX3O15119 743 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 MBD3O95983 291 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 CIITAP33076 1130 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 SREBF1P36956 1147 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 UBE2HP62256 183 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 NR5A1Q13285 461 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 TMEM132BQ14DG7 1078 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 STK38Q15208 465 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 SF3A1Q15459 793 aaKnown RBP10.49□□□□□ -0.73
CASC3-209ENST00000583902 FAM110CQ1W6H9 321 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 USH1GQ495M9 461 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 SNRNP48Q6IEG0 339 aaKnown RBP10.49□□□□□ -0.73
CASC3-209ENST00000583902 RNF207Q6ZRF8 634 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 PIK3AP1Q6ZUJ8 805 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 ABRAQ8N0Z2 381 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 CPXCR1Q8N123 301 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 GPRC5AQ8NFJ5 357 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 DNERQ8NFT8 737 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 BRI3BPQ8WY22 251 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 PYM1Q9BRP8 204 aaKnown RBP10.49□□□□□ -0.73
CASC3-209ENST00000583902 BMP2KQ9NSY1 1161 aaPredicted RBP10.49□□□□□ -0.73
CASC3-209ENST00000583902 ADD3Q9UEY8 706 aaKnown RBP10.49□□□□□ -0.73
CASC3-209ENST00000583902 SMCHD1A6NHR9 2005 aa10.49□□□□□ -0.73
CASC3-209ENST00000583902 MYH7BA7E2Y1 1941 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 CYP3A7-CYP3A51PA0A087WV96 503 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 A0A1W2PQ27 194 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 A0A1W2PQ64 194 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 A0A1W2PQD8 194 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 SPTLC2O15270 562 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 MAFGO15525 162 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 SLC26A4O43511 780 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 PYGBP11216 843 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 CHRM1P11229 460 aaPredicted RBP10.48□□□□□ -0.73
CASC3-209ENST00000583902 ALAS1P13196 640 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 CYP3A7P24462 503 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 MAP2K2P36507 400 aa10.48□□□□□ -0.73
CASC3-209ENST00000583902 SETQ01105 290 aaPredicted RBP10.48□□□□□ -0.73
CASC3-209ENST00000583902 FMR1Q06787 632 aaKnown RBP eCLIP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms