RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 SUGP1Q8IWZ8 645 aaKnown RBP13.28□□□□□ -0.28
CASC3-208ENST00000583649 FBXO22Q8NEZ5 403 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 FRAT1Q92837 279 aaPredicted RBP13.28□□□□□ -0.28
CASC3-208ENST00000583649 VWCEQ96DN2 955 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 MRPL38Q96DV4 380 aaKnown RBP13.28□□□□□ -0.28
CASC3-208ENST00000583649 SAMD11Q96NU1 681 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 DNAJC2Q99543 621 aaKnown RBP13.28□□□□□ -0.28
CASC3-208ENST00000583649 A1CFQ9NQ94 594 aaKnown RBP13.28□□□□□ -0.28
CASC3-208ENST00000583649 RNF146Q9NTX7 359 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 CLIP2Q9UDT6 1046 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 INSL6Q9Y581 213 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 TRANK1O15050 2925 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 ZNF316A6NFI3 1004 aaPredicted RBP13.27□□□□□ -0.29
CASC3-208ENST00000583649 GJB5O95377 273 aa13.27□□□□□ -0.29
CASC3-208ENST00000583649 BMP3P12645 472 aa13.27□□□□□ -0.29
CASC3-208ENST00000583649 NBPF20Q3BBV1 942 aa13.27□□□□□ -0.29
CASC3-208ENST00000583649 PPP4R3BQ5MIZ7 849 aa13.27□□□□□ -0.29
CASC3-208ENST00000583649 ZSCAN25Q6NSZ9 544 aa13.27□□□□□ -0.29
CASC3-208ENST00000583649 FBXO16Q8IX29 292 aaPredicted RBP13.27□□□□□ -0.29
CASC3-208ENST00000583649 ZNF444Q8N0Y2 327 aaPredicted RBP13.27□□□□□ -0.29
CASC3-208ENST00000583649 OR6J1Q8NGC5 347 aa13.27□□□□□ -0.29
CASC3-208ENST00000583649 NEK9Q8TD19 979 aa13.27□□□□□ -0.29
CASC3-208ENST00000583649 PABPC5Q96DU9 382 aaKnown RBP13.27□□□□□ -0.29
CASC3-208ENST00000583649 TRERF1Q96PN7 1200 aa13.27□□□□□ -0.29
CASC3-208ENST00000583649 WDR11Q9BZH6 1224 aa13.27□□□□□ -0.29
CASC3-208ENST00000583649 SLC4A4Q9Y6R1 1079 aa13.27□□□□□ -0.29
CASC3-208ENST00000583649 TCRBV5S4A2TA0A5A2 114 aa13.26□□□□□ -0.29
CASC3-208ENST00000583649 SOWAHBA6NEL2 793 aa13.26□□□□□ -0.29
CASC3-208ENST00000583649 B4DLN1 442 aa13.26□□□□□ -0.29
CASC3-208ENST00000583649 ARHGEF15O94989 841 aa13.26□□□□□ -0.29
CASC3-208ENST00000583649 ALAS1P13196 640 aa13.26□□□□□ -0.29
CASC3-208ENST00000583649 TRIM27P14373 513 aa13.26□□□□□ -0.29
CASC3-208ENST00000583649 MRPL12P52815 198 aaKnown RBP13.26□□□□□ -0.29
CASC3-208ENST00000583649 ZP2Q05996 745 aa13.26□□□□□ -0.29
CASC3-208ENST00000583649 PTGISQ16647 500 aa13.26□□□□□ -0.29
CASC3-208ENST00000583649 TAPT1Q6NXT6 567 aa13.26□□□□□ -0.29
CASC3-208ENST00000583649 CLASRPQ8N2M8 674 aaKnown RBP13.26□□□□□ -0.29
CASC3-208ENST00000583649 BANK1Q8NDB2 785 aa13.26□□□□□ -0.29
CASC3-208ENST00000583649 GMCL1P1Q8NEA9 526 aa13.26□□□□□ -0.29
CASC3-208ENST00000583649 PDGFCQ9NRA1 345 aa13.26□□□□□ -0.29
CASC3-208ENST00000583649 LCHNA4D1U4 455 aa13.25□□□□□ -0.29
CASC3-208ENST00000583649 LINC01553A4QN01 128 aa13.25□□□□□ -0.29
CASC3-208ENST00000583649 H3BQ06 376 aaPredicted RBP13.25□□□□□ -0.29
CASC3-208ENST00000583649 PRKAB2O43741 272 aa13.25□□□□□ -0.29
CASC3-208ENST00000583649 GFRA3O60609 400 aa13.25□□□□□ -0.29
CASC3-208ENST00000583649 TTLL1O95922 423 aa13.25□□□□□ -0.29
CASC3-208ENST00000583649 IFIT2P09913 472 aaKnown RBP13.25□□□□□ -0.29
CASC3-208ENST00000583649 SELPP16109 830 aa13.25□□□□□ -0.29
CASC3-208ENST00000583649 LRRC8DQ7L1W4 858 aa13.25□□□□□ -0.29
CASC3-208ENST00000583649 TRMT2AQ8IZ69 625 aaKnown RBP13.25□□□□□ -0.29
CASC3-208ENST00000583649 CLUAP1Q96AJ1 413 aa13.25□□□□□ -0.29
CASC3-208ENST00000583649 CYP2D7A0A087X1C5 515 aa13.24□□□□□ -0.29
CASC3-208ENST00000583649 C19orf67A6NJJ6 358 aa13.24□□□□□ -0.29
CASC3-208ENST00000583649 TMEM232C9JQI7 657 aa13.24□□□□□ -0.29
CASC3-208ENST00000583649 AMHP03971 560 aa13.24□□□□□ -0.29
CASC3-208ENST00000583649 ADD2P35612 726 aa13.24□□□□□ -0.29
CASC3-208ENST00000583649 CHMP4BP1P59074 171 aa13.24□□□□□ -0.29
CASC3-208ENST00000583649 PPP2R5BQ15173 497 aa13.24□□□□□ -0.29
CASC3-208ENST00000583649 HERC4Q5GLZ8 1057 aaPredicted RBP13.24□□□□□ -0.29
CASC3-208ENST00000583649 SLFN13Q68D06 897 aa13.24□□□□□ -0.29
CASC3-208ENST00000583649 CTR9Q6PD62 1173 aa13.24□□□□□ -0.29
CASC3-208ENST00000583649 BMP8AQ7Z5Y6 402 aa13.24□□□□□ -0.29
CASC3-208ENST00000583649 MKL1Q969V6 931 aa13.24□□□□□ -0.29
CASC3-208ENST00000583649 PBXIP1Q96AQ6 731 aa13.24□□□□□ -0.29
CASC3-208ENST00000583649 NSUN3Q9H649 340 aaKnown RBP13.24□□□□□ -0.29
CASC3-208ENST00000583649 CYP39A1Q9NYL5 469 aa13.24□□□□□ -0.29
CASC3-208ENST00000583649 SLC1A4P43007 532 aa13.23□□□□□ -0.29
CASC3-208ENST00000583649 UBE3CQ15386 1083 aa13.23□□□□□ -0.29
CASC3-208ENST00000583649 NSMFQ6X4W1 530 aa13.23□□□□□ -0.29
CASC3-208ENST00000583649 FTSJ3Q8IY81 847 aaKnown RBP13.23□□□□□ -0.29
CASC3-208ENST00000583649 LRRC47Q8N1G4 583 aaKnown RBP13.23□□□□□ -0.29
CASC3-208ENST00000583649 MORC4Q8TE76 937 aa13.23□□□□□ -0.29
CASC3-208ENST00000583649 STAG1Q8WVM7 1258 aa13.23□□□□□ -0.29
CASC3-208ENST00000583649 EDAQ92838 391 aa13.23□□□□□ -0.29
CASC3-208ENST00000583649 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.23□□□□□ -0.29
CASC3-208ENST00000583649 PAG1Q9NWQ8 432 aa13.23□□□□□ -0.29
CASC3-208ENST00000583649 PNMA2Q9UL42 364 aa13.23□□□□□ -0.29
CASC3-208ENST00000583649 COL4A4P53420 1690 aaPredicted RBP13.23□□□□□ -0.29
CASC3-208ENST00000583649 MCM3APO60318 1980 aa13.22□□□□□ -0.29
CASC3-208ENST00000583649 MINDY4BA8MYZ0 360 aa13.22□□□□□ -0.29
CASC3-208ENST00000583649 SLC3A2P08195 630 aaKnown RBP13.22□□□□□ -0.29
CASC3-208ENST00000583649 DEFB103AP81534 67 aa13.22□□□□□ -0.29
CASC3-208ENST00000583649 PDE4DQ08499 809 aa13.22□□□□□ -0.29
CASC3-208ENST00000583649 SBK1Q52WX2 424 aa13.22□□□□□ -0.29
CASC3-208ENST00000583649 GIMAP6Q6P9H5 292 aa13.22□□□□□ -0.29
CASC3-208ENST00000583649 SCFD2Q8WU76 684 aa13.22□□□□□ -0.29
CASC3-208ENST00000583649 CLDND1Q9NY35 253 aa13.22□□□□□ -0.29
CASC3-208ENST00000583649 CCPG1Q9ULG6 757 aa13.22□□□□□ -0.29
CASC3-208ENST00000583649 EMSYQ7Z589 1322 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 A6NJR5 290 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 PLA2G6O60733 806 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 CXCL10P02778 98 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 TSPY3P0CV98 308 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 TSPY8P0CW00 308 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 RASA1P20936 1047 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 IRS1P35568 1242 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 GPM6BQ13491 265 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 ZKSCAN2Q63HK3 967 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 FAM117BQ6P1L5 589 aa13.21□□□□□ -0.29
CASC3-208ENST00000583649 ERMP1Q7Z2K6 904 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms