RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 SLC4A7Q9Y6M7 1214 aa19.13■□□□□ 0.65
SREBF1-221ENST00000583080 SCN5AQ14524 2016 aa19.13■□□□□ 0.65
SREBF1-221ENST00000583080 NCOR1O75376 2440 aa19.12■□□□□ 0.65
SREBF1-221ENST00000583080 NFIBO00712 420 aa19.12■□□□□ 0.65
SREBF1-221ENST00000583080 CYP2C9P11712 490 aa19.12■□□□□ 0.65
SREBF1-221ENST00000583080 SLC16A2P36021 539 aa19.12■□□□□ 0.65
SREBF1-221ENST00000583080 ALDH5A1P51649 535 aaPredicted RBP19.12■□□□□ 0.65
SREBF1-221ENST00000583080 BAATQ14032 418 aaPredicted RBP19.12■□□□□ 0.65
SREBF1-221ENST00000583080 TTLL4Q14679 1199 aa19.12■□□□□ 0.65
SREBF1-221ENST00000583080 DUSP28Q4G0W2 176 aa19.12■□□□□ 0.65
SREBF1-221ENST00000583080 VPS53Q5VIR6 699 aa19.12■□□□□ 0.65
SREBF1-221ENST00000583080 MICALL1Q8N3F8 863 aa19.12■□□□□ 0.65
SREBF1-221ENST00000583080 PPP1R13LQ8WUF5 828 aa19.12■□□□□ 0.65
SREBF1-221ENST00000583080 UHRF1Q96T88 793 aaPredicted RBP19.12■□□□□ 0.65
SREBF1-221ENST00000583080 SEZ6LQ9BYH1 1024 aa19.12■□□□□ 0.65
SREBF1-221ENST00000583080 RANBP17Q9H2T7 1088 aaKnown RBP19.12■□□□□ 0.65
SREBF1-221ENST00000583080 TNKSO95271 1327 aa19.11■□□□□ 0.65
SREBF1-221ENST00000583080 ERC2O15083 957 aa19.11■□□□□ 0.65
SREBF1-221ENST00000583080 RANBP6O60518 1105 aaKnown RBP19.11■□□□□ 0.65
SREBF1-221ENST00000583080 NOVP48745 357 aa19.11■□□□□ 0.65
SREBF1-221ENST00000583080 PPP4R3BQ5MIZ7 849 aa19.11■□□□□ 0.65
SREBF1-221ENST00000583080 SLC30A10Q6XR72 485 aa19.11■□□□□ 0.65
SREBF1-221ENST00000583080 NECAB3Q96P71 396 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-221ENST00000583080 PCDHA11Q9Y5I1 949 aa19.11■□□□□ 0.65
SREBF1-221ENST00000583080 TANC1Q9C0D5 1861 aa19.1■□□□□ 0.65
SREBF1-221ENST00000583080 FRMPD2Q68DX3 1309 aaPredicted RBP19.1■□□□□ 0.65
SREBF1-221ENST00000583080 MYL3P08590 195 aa19.1■□□□□ 0.65
SREBF1-221ENST00000583080 ATP2A2P16615 1042 aaKnown RBP19.1■□□□□ 0.65
SREBF1-221ENST00000583080 PURAQ00577 322 aaKnown RBP19.1■□□□□ 0.65
SREBF1-221ENST00000583080 DEFB128Q7Z7B8 93 aa19.1■□□□□ 0.65
SREBF1-221ENST00000583080 RPUSD2Q8IZ73 545 aaKnown RBP19.1■□□□□ 0.65
SREBF1-221ENST00000583080 DCAF4Q8WV16 495 aa19.1■□□□□ 0.65
SREBF1-221ENST00000583080 WDR11Q9BZH6 1224 aa19.1■□□□□ 0.65
SREBF1-221ENST00000583080 REV3LO60673 3130 aa19.1■□□□□ 0.65
SREBF1-221ENST00000583080 SCN10AQ9Y5Y9 1956 aa19.1■□□□□ 0.65
SREBF1-221ENST00000583080 TFF2Q03403 129 aa19.09■□□□□ 0.65
SREBF1-221ENST00000583080 SYDE2Q5VT97 1194 aa19.09■□□□□ 0.65
SREBF1-221ENST00000583080 POLR3EQ9NVU0 708 aa19.09■□□□□ 0.65
SREBF1-221ENST00000583080 PCDHB15Q9Y5E8 787 aa19.09■□□□□ 0.65
SREBF1-221ENST00000583080 TCF20Q9UGU0 1960 aaKnown RBP19.08■□□□□ 0.65
SREBF1-221ENST00000583080 PTPDC1A2A3K4 754 aa19.08■□□□□ 0.64
SREBF1-221ENST00000583080 RFXAPO00287 272 aa19.08■□□□□ 0.64
SREBF1-221ENST00000583080 ORC4O43929 436 aa19.08■□□□□ 0.64
SREBF1-221ENST00000583080 CA3P07451 260 aa19.08■□□□□ 0.64
SREBF1-221ENST00000583080 MX1P20591 662 aa19.08■□□□□ 0.64
SREBF1-221ENST00000583080 BTNL9Q6UXG8 535 aa19.08■□□□□ 0.64
SREBF1-221ENST00000583080 OR6J1Q8NGC5 347 aa19.08■□□□□ 0.64
SREBF1-221ENST00000583080 GPCPD1Q9NPB8 672 aa19.08■□□□□ 0.64
SREBF1-221ENST00000583080 ADD3Q9UEY8 706 aaKnown RBP19.08■□□□□ 0.64
SREBF1-221ENST00000583080 ANAPC4Q9UJX5 808 aa19.08■□□□□ 0.64
SREBF1-221ENST00000583080 PRRC2BQ5JSZ5 2229 aaKnown RBP19.08■□□□□ 0.64
SREBF1-221ENST00000583080 BDP1A6H8Y1 2624 aa19.07■□□□□ 0.64
SREBF1-221ENST00000583080 SALL3Q9BXA9 1300 aa19.07■□□□□ 0.64
SREBF1-221ENST00000583080 RBM47A0AV96 593 aaKnown RBP19.07■□□□□ 0.64
SREBF1-221ENST00000583080 EPOPA6NHQ4 379 aa19.07■□□□□ 0.64
SREBF1-221ENST00000583080 ARHGEF15O94989 841 aa19.07■□□□□ 0.64
SREBF1-221ENST00000583080 CALML3P27482 149 aa19.07■□□□□ 0.64
SREBF1-221ENST00000583080 CPT1AP50416 773 aa19.07■□□□□ 0.64
SREBF1-221ENST00000583080 FAM47CQ5HY64 1035 aa19.07■□□□□ 0.64
SREBF1-221ENST00000583080 IL27Q8NEV9 243 aa19.07■□□□□ 0.64
SREBF1-221ENST00000583080 CLEC4DQ8WXI8 215 aa19.07■□□□□ 0.64
SREBF1-221ENST00000583080 COPS5Q92905 334 aa19.07■□□□□ 0.64
SREBF1-221ENST00000583080 TMEM47Q9BQJ4 181 aa19.07■□□□□ 0.64
SREBF1-221ENST00000583080 MTG1Q9BT17 334 aaPredicted RBP19.07■□□□□ 0.64
SREBF1-221ENST00000583080 CERS4Q9HA82 394 aa19.07■□□□□ 0.64
SREBF1-221ENST00000583080 PFKMP08237 780 aa19.06■□□□□ 0.64
SREBF1-221ENST00000583080 FGRP09769 529 aa19.06■□□□□ 0.64
SREBF1-221ENST00000583080 SUPT20HL2P0C7V6 817 aa19.06■□□□□ 0.64
SREBF1-221ENST00000583080 KCNQ1P51787 676 aa19.06■□□□□ 0.64
SREBF1-221ENST00000583080 NBPF20Q3BBV1 942 aa19.06■□□□□ 0.64
SREBF1-221ENST00000583080 RRP12Q5JTH9 1297 aaKnown RBP19.06■□□□□ 0.64
SREBF1-221ENST00000583080 TOMM22Q9NS69 142 aa19.06■□□□□ 0.64
SREBF1-221ENST00000583080 XIRP2A4UGR9 3374 aa19.06■□□□□ 0.64
SREBF1-221ENST00000583080 TOP1P11387 765 aaKnown RBP19.05■□□□□ 0.64
SREBF1-221ENST00000583080 PPP2R5BQ15173 497 aa19.05■□□□□ 0.64
SREBF1-221ENST00000583080 TMEM67Q5HYA8 995 aa19.05■□□□□ 0.64
SREBF1-221ENST00000583080 KRT40Q6A162 431 aa19.05■□□□□ 0.64
SREBF1-221ENST00000583080 LOC102724159A0A0B4J2E5 919 aa19.04■□□□□ 0.64
SREBF1-221ENST00000583080 PDHBP11177 359 aa19.04■□□□□ 0.64
SREBF1-221ENST00000583080 BMP1P13497 986 aa19.04■□□□□ 0.64
SREBF1-221ENST00000583080 EDNRBP24530 442 aa19.04■□□□□ 0.64
SREBF1-221ENST00000583080 PDE4DQ08499 809 aa19.04■□□□□ 0.64
SREBF1-221ENST00000583080 PWP2Q15269 919 aaKnown RBP19.04■□□□□ 0.64
SREBF1-221ENST00000583080 SKIV2LQ15477 1246 aaKnown RBP19.04■□□□□ 0.64
SREBF1-221ENST00000583080 RNF207Q6ZRF8 634 aa19.04■□□□□ 0.64
SREBF1-221ENST00000583080 TSPYL2Q9H2G4 693 aaPredicted RBP19.04■□□□□ 0.64
SREBF1-221ENST00000583080 GPHNQ9NQX3 736 aaPredicted RBP19.04■□□□□ 0.64
SREBF1-221ENST00000583080 MTCH2Q9Y6C9 303 aa19.04■□□□□ 0.64
SREBF1-221ENST00000583080 TET1Q8NFU7 2136 aa19.04■□□□□ 0.64
SREBF1-221ENST00000583080 COL4A4P53420 1690 aaPredicted RBP19.04■□□□□ 0.64
SREBF1-221ENST00000583080 TRANK1O15050 2925 aa19.04■□□□□ 0.64
SREBF1-221ENST00000583080 PTPRSQ13332 1948 aa19.04■□□□□ 0.64
SREBF1-221ENST00000583080 A0A0D9SFI3 127 aa19.03■□□□□ 0.64
SREBF1-221ENST00000583080 RBAK-RBAKDNI3L0D1 243 aa19.03■□□□□ 0.64
SREBF1-221ENST00000583080 ARIH2O95376 493 aa19.03■□□□□ 0.64
SREBF1-221ENST00000583080 RPS6P62753 249 aaKnown RBP19.03■□□□□ 0.64
SREBF1-221ENST00000583080 ALX1Q15699 326 aa19.03■□□□□ 0.64
SREBF1-221ENST00000583080 SPRED2Q7Z698 418 aa19.03■□□□□ 0.64
SREBF1-221ENST00000583080 FAM227BQ96M60 508 aa19.03■□□□□ 0.64
SREBF1-221ENST00000583080 SLC9A7Q96T83 725 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms