RNA–Protein interactions for RNA: ENST00000582818.5

ERBB2-213, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-213ENST00000582818 HERVK_113Q902F9 699 aa16.47■□□□□ 0.23
ERBB2-213ENST00000582818 TTC14Q96N46 770 aa16.47■□□□□ 0.23
ERBB2-213ENST00000582818 RANBP17Q9H2T7 1088 aaKnown RBP16.47■□□□□ 0.23
ERBB2-213ENST00000582818 IL23AQ9NPF7 189 aa16.47■□□□□ 0.23
ERBB2-213ENST00000582818 CCPG1Q9ULG6 757 aa16.47■□□□□ 0.23
ERBB2-213ENST00000582818 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
ERBB2-213ENST00000582818 ASTN1O14525 1302 aa16.46■□□□□ 0.23
ERBB2-213ENST00000582818 CSF2RAP15509 400 aa16.46■□□□□ 0.23
ERBB2-213ENST00000582818 CTDSPL2Q05D32 466 aa16.46■□□□□ 0.23
ERBB2-213ENST00000582818 ITGA7Q13683 1181 aa16.46■□□□□ 0.23
ERBB2-213ENST00000582818 RAB30Q15771 203 aa16.46■□□□□ 0.23
ERBB2-213ENST00000582818 TAPT1Q6NXT6 567 aa16.46■□□□□ 0.23
ERBB2-213ENST00000582818 ESYT1Q9BSJ8 1104 aa16.46■□□□□ 0.23
ERBB2-213ENST00000582818 SPTBN5Q9NRC6 3674 aaKnown RBP16.46■□□□□ 0.22
ERBB2-213ENST00000582818 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.45■□□□□ 0.22
ERBB2-213ENST00000582818 SMPD1P17405 629 aa16.45■□□□□ 0.22
ERBB2-213ENST00000582818 GRIN2CQ14957 1233 aa16.45■□□□□ 0.22
ERBB2-213ENST00000582818 DUSP28Q4G0W2 176 aa16.45■□□□□ 0.22
ERBB2-213ENST00000582818 MUM1L1Q5H9M0 696 aa16.45■□□□□ 0.22
ERBB2-213ENST00000582818 AKNAD1Q5T1N1 836 aa16.45■□□□□ 0.22
ERBB2-213ENST00000582818 CXCL17Q6UXB2 119 aa16.45■□□□□ 0.22
ERBB2-213ENST00000582818 MFSD6Q6ZSS7 791 aa16.45■□□□□ 0.22
ERBB2-213ENST00000582818 ZNF365Q70YC5 407 aa16.45■□□□□ 0.22
ERBB2-213ENST00000582818 SKAP1Q86WV1 359 aa16.45■□□□□ 0.22
ERBB2-213ENST00000582818 RPUSD2Q8IZ73 545 aaKnown RBP16.45■□□□□ 0.22
ERBB2-213ENST00000582818 MAP4K1Q92918 833 aa16.45■□□□□ 0.22
ERBB2-213ENST00000582818 MPHOSPH6Q99547 160 aaKnown RBP16.45■□□□□ 0.22
ERBB2-213ENST00000582818 HIPK3Q9H422 1215 aa16.45■□□□□ 0.22
ERBB2-213ENST00000582818 SCN10AQ9Y5Y9 1956 aa16.45■□□□□ 0.22
ERBB2-213ENST00000582818 RBM47A0AV96 593 aaKnown RBP16.44■□□□□ 0.22
ERBB2-213ENST00000582818 B4DLN1 442 aa16.44■□□□□ 0.22
ERBB2-213ENST00000582818 NKRFO15226 690 aaKnown RBP eCLIP16.44■□□□□ 0.22
ERBB2-213ENST00000582818 DYNC1LI2O43237 492 aaPredicted RBP16.44■□□□□ 0.22
ERBB2-213ENST00000582818 NMT2O60551 498 aa16.44■□□□□ 0.22
ERBB2-213ENST00000582818 PFKMP08237 780 aa16.44■□□□□ 0.22
ERBB2-213ENST00000582818 SUPT20HL2P0C7V6 817 aa16.44■□□□□ 0.22
ERBB2-213ENST00000582818 MRPL12P52815 198 aaKnown RBP16.44■□□□□ 0.22
ERBB2-213ENST00000582818 IRX5P78411 483 aaPredicted RBP16.44■□□□□ 0.22
ERBB2-213ENST00000582818 BEX3Q00994 111 aa16.44■□□□□ 0.22
ERBB2-213ENST00000582818 NSMFQ6X4W1 530 aa16.44■□□□□ 0.22
ERBB2-213ENST00000582818 POLR3EQ9NVU0 708 aa16.44■□□□□ 0.22
ERBB2-213ENST00000582818 CHD7Q9P2D1 2997 aa16.44■□□□□ 0.22
ERBB2-213ENST00000582818 MSRAQ9UJ68 235 aa16.44■□□□□ 0.22
ERBB2-213ENST00000582818 WDR19Q8NEZ3 1342 aa16.44■□□□□ 0.22
ERBB2-213ENST00000582818 MUC3AQ02505 3323 aa16.43■□□□□ 0.22
ERBB2-213ENST00000582818 EPB41L2O43491 1005 aaKnown RBP16.43■□□□□ 0.22
ERBB2-213ENST00000582818 KPNA6O60684 536 aa16.43■□□□□ 0.22
ERBB2-213ENST00000582818 FGBP02675 491 aa16.43■□□□□ 0.22
ERBB2-213ENST00000582818 CPT1AP50416 773 aa16.43■□□□□ 0.22
ERBB2-213ENST00000582818 CCDC96Q2M329 555 aa16.43■□□□□ 0.22
ERBB2-213ENST00000582818 BRDTQ58F21 947 aaPredicted RBP16.43■□□□□ 0.22
ERBB2-213ENST00000582818 SYDE2Q5VT97 1194 aa16.43■□□□□ 0.22
ERBB2-213ENST00000582818 RGS22Q8NE09 1264 aa16.43■□□□□ 0.22
ERBB2-213ENST00000582818 DNERQ8NFT8 737 aa16.43■□□□□ 0.22
ERBB2-213ENST00000582818 GAS2L1Q99501 681 aaPredicted RBP16.43■□□□□ 0.22
ERBB2-213ENST00000582818 TMEM47Q9BQJ4 181 aa16.43■□□□□ 0.22
ERBB2-213ENST00000582818 NOC4LQ9BVI4 516 aaKnown RBP16.43■□□□□ 0.22
ERBB2-213ENST00000582818 PBX4Q9BYU1 374 aa16.43■□□□□ 0.22
ERBB2-213ENST00000582818 CNNM2Q9H8M5 875 aa16.43■□□□□ 0.22
ERBB2-213ENST00000582818 GRIN2DO15399 1336 aa16.43■□□□□ 0.22
ERBB2-213ENST00000582818 TRANK1O15050 2925 aa16.42■□□□□ 0.22
ERBB2-213ENST00000582818 CYP2C18P33260 490 aa16.42■□□□□ 0.22
ERBB2-213ENST00000582818 ALDH5A1P51649 535 aaPredicted RBP16.42■□□□□ 0.22
ERBB2-213ENST00000582818 CCDC178Q5BJE1 867 aa16.42■□□□□ 0.22
ERBB2-213ENST00000582818 GPATCH4Q5T3I0 446 aaKnown RBP16.42■□□□□ 0.22
ERBB2-213ENST00000582818 FBXO16Q8IX29 292 aaPredicted RBP16.42■□□□□ 0.22
ERBB2-213ENST00000582818 PPP1R12CQ9BZL4 782 aa16.42■□□□□ 0.22
ERBB2-213ENST00000582818 PDGFCQ9NRA1 345 aa16.42■□□□□ 0.22
ERBB2-213ENST00000582818 GBF1Q92538 1859 aa16.42■□□□□ 0.22
ERBB2-213ENST00000582818 REC8O95072 547 aa16.41■□□□□ 0.22
ERBB2-213ENST00000582818 SNHG28P0DPA3 235 aa16.41■□□□□ 0.22
ERBB2-213ENST00000582818 PDHBP11177 359 aa16.41■□□□□ 0.22
ERBB2-213ENST00000582818 TRDNQ13061 729 aa16.41■□□□□ 0.22
ERBB2-213ENST00000582818 BAATQ14032 418 aaPredicted RBP16.41■□□□□ 0.22
ERBB2-213ENST00000582818 RNF20Q5VTR2 975 aa16.41■□□□□ 0.22
ERBB2-213ENST00000582818 ESR2Q92731 530 aa16.41■□□□□ 0.22
ERBB2-213ENST00000582818 WDR11Q9BZH6 1224 aa16.41■□□□□ 0.22
ERBB2-213ENST00000582818 KRT23Q9C075 422 aa16.41■□□□□ 0.22
ERBB2-213ENST00000582818 IL25Q9H293 177 aa16.41■□□□□ 0.22
ERBB2-213ENST00000582818 ALDH8A1Q9H2A2 487 aaPredicted RBP16.41■□□□□ 0.22
ERBB2-213ENST00000582818 ANO2Q9NQ90 1003 aa16.41■□□□□ 0.22
ERBB2-213ENST00000582818 INCENPQ9NQS7 918 aa16.41■□□□□ 0.22
ERBB2-213ENST00000582818 BDP1A6H8Y1 2624 aa16.4■□□□□ 0.22
ERBB2-213ENST00000582818 B4GALT4O60513 344 aa16.4■□□□□ 0.22
ERBB2-213ENST00000582818 EDNRBP24530 442 aa16.4■□□□□ 0.22
ERBB2-213ENST00000582818 PTH1RQ03431 593 aa16.4■□□□□ 0.22
ERBB2-213ENST00000582818 ZNF543Q08ER8 600 aa16.4■□□□□ 0.22
ERBB2-213ENST00000582818 TJAP1Q5JTD0 557 aa16.4■□□□□ 0.22
ERBB2-213ENST00000582818 DGKHQ86XP1 1220 aa16.4■□□□□ 0.22
ERBB2-213ENST00000582818 SCFD2Q8WU76 684 aa16.4■□□□□ 0.22
ERBB2-213ENST00000582818 ATXN2LQ8WWM7 1075 aaKnown RBP16.4■□□□□ 0.22
ERBB2-213ENST00000582818 CLEC4DQ8WXI8 215 aa16.4■□□□□ 0.22
ERBB2-213ENST00000582818 TOMM22Q9NS69 142 aa16.4■□□□□ 0.22
ERBB2-213ENST00000582818 MYH6P13533 1939 aa16.4■□□□□ 0.22
ERBB2-213ENST00000582818 NFIBO00712 420 aa16.39■□□□□ 0.21
ERBB2-213ENST00000582818 ACRP10323 421 aa16.39■□□□□ 0.21
ERBB2-213ENST00000582818 RFC2P35250 354 aa16.39■□□□□ 0.21
ERBB2-213ENST00000582818 SLC16A2P36021 539 aa16.39■□□□□ 0.21
ERBB2-213ENST00000582818 SNAP25P60880 206 aa16.39■□□□□ 0.21
ERBB2-213ENST00000582818 HAND2P61296 217 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms