RNA–Protein interactions for RNA: ENST00000582648.5

ERBB2-211, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-211ENST00000582648 SYNRGQ9UMZ2 1314 aa20.91■□□□□ 0.94
ERBB2-211ENST00000582648 MRPL11Q9Y3B7 192 aaKnown RBP20.91■□□□□ 0.94
ERBB2-211ENST00000582648 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.9■□□□□ 0.94
ERBB2-211ENST00000582648 H0YGN5 161 aa20.9■□□□□ 0.94
ERBB2-211ENST00000582648 ADCYAP1R1P41586 468 aa20.9■□□□□ 0.94
ERBB2-211ENST00000582648 ATN1P54259 1190 aaPredicted RBP20.9■□□□□ 0.94
ERBB2-211ENST00000582648 EXOSC10Q01780 885 aaKnown RBP20.9■□□□□ 0.94
ERBB2-211ENST00000582648 KCNB2Q92953 911 aa20.9■□□□□ 0.94
ERBB2-211ENST00000582648 PCDHA1Q9Y5I3 950 aa20.9■□□□□ 0.94
ERBB2-211ENST00000582648 CFBP00751 764 aa20.89■□□□□ 0.93
ERBB2-211ENST00000582648 CALM1P0DP23 149 aa20.89■□□□□ 0.93
ERBB2-211ENST00000582648 CALM2P0DP24 149 aa20.89■□□□□ 0.93
ERBB2-211ENST00000582648 CALM3P0DP25 149 aa20.89■□□□□ 0.93
ERBB2-211ENST00000582648 PTGS1P23219 599 aa20.89■□□□□ 0.93
ERBB2-211ENST00000582648 IRX5P78411 483 aaPredicted RBP20.89■□□□□ 0.93
ERBB2-211ENST00000582648 FGD1P98174 961 aa20.89■□□□□ 0.93
ERBB2-211ENST00000582648 NOL8Q76FK4 1167 aaKnown RBP20.89■□□□□ 0.93
ERBB2-211ENST00000582648 SGMS1Q86VZ5 419 aa20.89■□□□□ 0.93
ERBB2-211ENST00000582648 MCF2L2Q86YR7 1114 aa20.89■□□□□ 0.93
ERBB2-211ENST00000582648 FERMT2Q96AC1 680 aa20.89■□□□□ 0.93
ERBB2-211ENST00000582648 MAP3K14Q99558 947 aa20.89■□□□□ 0.93
ERBB2-211ENST00000582648 PDGFCQ9NRA1 345 aa20.89■□□□□ 0.93
ERBB2-211ENST00000582648 COL20A1Q9P218 1284 aa20.89■□□□□ 0.93
ERBB2-211ENST00000582648 NAP1L2Q9ULW6 460 aaPredicted RBP20.89■□□□□ 0.93
ERBB2-211ENST00000582648 PNMA6FA0A0J9YX94 578 aa20.88■□□□□ 0.93
ERBB2-211ENST00000582648 MYADML2A6NDP7 307 aa20.88■□□□□ 0.93
ERBB2-211ENST00000582648 OPLAHO14841 1288 aa20.88■□□□□ 0.93
ERBB2-211ENST00000582648 ADAMTS4O75173 837 aa20.88■□□□□ 0.93
ERBB2-211ENST00000582648 LRRC26Q2I0M4 334 aa20.88■□□□□ 0.93
ERBB2-211ENST00000582648 APOA5Q6Q788 366 aa20.88■□□□□ 0.93
ERBB2-211ENST00000582648 BLOC1S2Q6QNY1 142 aa20.88■□□□□ 0.93
ERBB2-211ENST00000582648 SYNE3Q6ZMZ3 975 aa20.88■□□□□ 0.93
ERBB2-211ENST00000582648 RNF180Q86T96 592 aa20.88■□□□□ 0.93
ERBB2-211ENST00000582648 SRBD1Q8N5C6 995 aaKnown RBP20.88■□□□□ 0.93
ERBB2-211ENST00000582648 SYTL5Q8TDW5 730 aaPredicted RBP20.88■□□□□ 0.93
ERBB2-211ENST00000582648 SPZ1Q9BXG8 430 aa20.88■□□□□ 0.93
ERBB2-211ENST00000582648 PCDH10Q9P2E7 1040 aa20.88■□□□□ 0.93
ERBB2-211ENST00000582648 BRPF3Q9ULD4 1205 aa20.88■□□□□ 0.93
ERBB2-211ENST00000582648 KLF18A0A0U1RQI7 1052 aa20.87■□□□□ 0.93
ERBB2-211ENST00000582648 HMGB1P09429 215 aaKnown RBP20.87■□□□□ 0.93
ERBB2-211ENST00000582648 TNFAIP2Q03169 654 aa20.87■□□□□ 0.93
ERBB2-211ENST00000582648 PDE4DQ08499 809 aa20.87■□□□□ 0.93
ERBB2-211ENST00000582648 CCDC82Q8N4S0 544 aa20.87■□□□□ 0.93
ERBB2-211ENST00000582648 RGS22Q8NE09 1264 aa20.87■□□□□ 0.93
ERBB2-211ENST00000582648 MORC4Q8TE76 937 aa20.87■□□□□ 0.93
ERBB2-211ENST00000582648 RRP36Q96EU6 259 aaKnown RBP20.87■□□□□ 0.93
ERBB2-211ENST00000582648 TAAR1Q96RJ0 339 aa20.87■□□□□ 0.93
ERBB2-211ENST00000582648 VTA1Q9NP79 307 aa20.87■□□□□ 0.93
ERBB2-211ENST00000582648 NR2E3Q9Y5X4 410 aa20.87■□□□□ 0.93
ERBB2-211ENST00000582648 hCG_1642624A0A1W2PR95 340 aa20.86■□□□□ 0.93
ERBB2-211ENST00000582648 DUSP11O75319 330 aaKnown RBP20.86■□□□□ 0.93
ERBB2-211ENST00000582648 C6orf222P0C671 652 aaPredicted RBP20.86■□□□□ 0.93
ERBB2-211ENST00000582648 CASTP20810 708 aaKnown RBP20.86■□□□□ 0.93
ERBB2-211ENST00000582648 HOXA13P31271 388 aaPredicted RBP20.86■□□□□ 0.93
ERBB2-211ENST00000582648 GNAQP50148 359 aa20.86■□□□□ 0.93
ERBB2-211ENST00000582648 TMEM63BQ5T3F8 832 aa20.86■□□□□ 0.93
ERBB2-211ENST00000582648 TAPT1Q6NXT6 567 aa20.86■□□□□ 0.93
ERBB2-211ENST00000582648 TMTC3Q6ZXV5 915 aa20.86■□□□□ 0.93
ERBB2-211ENST00000582648 FANCBQ8NB91 859 aa20.86■□□□□ 0.93
ERBB2-211ENST00000582648 DNERQ8NFT8 737 aa20.86■□□□□ 0.93
ERBB2-211ENST00000582648 MPHOSPH6Q99547 160 aaKnown RBP20.86■□□□□ 0.93
ERBB2-211ENST00000582648 LZTS2Q9BRK4 669 aa20.86■□□□□ 0.93
ERBB2-211ENST00000582648 SEC63Q9UGP8 760 aaKnown RBP20.86■□□□□ 0.93
ERBB2-211ENST00000582648 ZMYND8Q9ULU4 1186 aaPredicted RBP20.86■□□□□ 0.93
ERBB2-211ENST00000582648 GOLGA8AA7E2F4 631 aa20.85■□□□□ 0.93
ERBB2-211ENST00000582648 GOLGA8BA8MQT2 603 aa20.85■□□□□ 0.93
ERBB2-211ENST00000582648 ZBTB43O43298 467 aa20.85■□□□□ 0.93
ERBB2-211ENST00000582648 SMPD1P17405 629 aa20.85■□□□□ 0.93
ERBB2-211ENST00000582648 EIF2AK2P19525 551 aaKnown RBP20.85■□□□□ 0.93
ERBB2-211ENST00000582648 Q6ZUG5 572 aa20.85■□□□□ 0.93
ERBB2-211ENST00000582648 USP26Q9BXU7 913 aa20.85■□□□□ 0.93
ERBB2-211ENST00000582648 SYN1P17600 705 aa20.84■□□□□ 0.93
ERBB2-211ENST00000582648 RPS6KB1P23443 525 aa20.84■□□□□ 0.93
ERBB2-211ENST00000582648 EDNRBP24530 442 aa20.84■□□□□ 0.93
ERBB2-211ENST00000582648 HSD17B4P51659 736 aa20.84■□□□□ 0.93
ERBB2-211ENST00000582648 APOBRQ0VD83 1088 aa20.84■□□□□ 0.93
ERBB2-211ENST00000582648 RTN1Q16799 776 aa20.84■□□□□ 0.93
ERBB2-211ENST00000582648 TLK2Q86UE8 772 aa20.84■□□□□ 0.93
ERBB2-211ENST00000582648 BRF1Q92994 677 aa20.84■□□□□ 0.93
ERBB2-211ENST00000582648 RMDN3Q96TC7 470 aa20.84■□□□□ 0.93
ERBB2-211ENST00000582648 SPC25Q9HBM1 224 aa20.84■□□□□ 0.93
ERBB2-211ENST00000582648 PHF24Q9UPV7 400 aa20.84■□□□□ 0.93
ERBB2-211ENST00000582648 LOC102724159A0A0B4J2E5 919 aa20.83■□□□□ 0.93
ERBB2-211ENST00000582648 A0A1W2PQ45 241 aaPredicted RBP20.83■□□□□ 0.93
ERBB2-211ENST00000582648 A0A1W2PQY0 241 aa20.83■□□□□ 0.93
ERBB2-211ENST00000582648 PSMA5P28066 241 aa20.83■□□□□ 0.93
ERBB2-211ENST00000582648 RTP1P59025 263 aa20.83■□□□□ 0.93
ERBB2-211ENST00000582648 BEX3Q00994 111 aa20.83■□□□□ 0.93
ERBB2-211ENST00000582648 TRAF1Q13077 416 aa20.83■□□□□ 0.93
ERBB2-211ENST00000582648 PWP2Q15269 919 aaKnown RBP20.83■□□□□ 0.93
ERBB2-211ENST00000582648 ARHGEF16Q5VV41 709 aa20.83■□□□□ 0.93
ERBB2-211ENST00000582648 UPF3AQ9H1J1 476 aaKnown RBP20.83■□□□□ 0.93
ERBB2-211ENST00000582648 ATP11BQ9Y2G3 1177 aa20.83■□□□□ 0.93
ERBB2-211ENST00000582648 KIAA1217Q5T5P2 1943 aa20.82■□□□□ 0.92
ERBB2-211ENST00000582648 CNTNAP5Q8WYK1 1306 aa20.82■□□□□ 0.92
ERBB2-211ENST00000582648 B4DLN1 442 aa20.82■□□□□ 0.92
ERBB2-211ENST00000582648 EPB41L2O43491 1005 aaKnown RBP20.82■□□□□ 0.92
ERBB2-211ENST00000582648 MRPL12P52815 198 aaKnown RBP20.82■□□□□ 0.92
ERBB2-211ENST00000582648 GJA9P57773 515 aa20.82■□□□□ 0.92
ERBB2-211ENST00000582648 KCNA10Q16322 511 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms