RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 PTPDC1A2A3K4 754 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 CCDC85CA6NKD9 419 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 PFKFB2O60825 505 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 PPFIA3O75145 1194 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 SNAI1O95863 264 aaPredicted RBP18.98■□□□□ 0.63
RNF43-206ENST00000582293 CYBAP13498 195 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 IFNAR1P17181 557 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 CALML3P27482 149 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 CCND3P30281 292 aaPredicted RBP18.98■□□□□ 0.63
RNF43-206ENST00000582293 HSD17B4P51659 736 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 UBXN2AP68543 259 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 ST3GAL1Q11201 340 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 PKN1Q16512 942 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 ME3Q16798 604 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 PRAMEF19Q5SWL8 479 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 WWC2Q6AWC2 1192 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 NOL8Q76FK4 1167 aaKnown RBP18.98■□□□□ 0.63
RNF43-206ENST00000582293 SYTL5Q8TDW5 730 aaPredicted RBP18.98■□□□□ 0.63
RNF43-206ENST00000582293 GPKOWQ92917 476 aaPredicted RBP eCLIP18.98■□□□□ 0.63
RNF43-206ENST00000582293 PHKBQ93100 1093 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 SHISA4Q96DD7 197 aa18.98■□□□□ 0.63
RNF43-206ENST00000582293 PAK6Q9NQU5 681 aaPredicted RBP18.98■□□□□ 0.63
RNF43-206ENST00000582293 MCM3APO60318 1980 aa18.97■□□□□ 0.63
RNF43-206ENST00000582293 POTEFA5A3E0 1075 aa18.97■□□□□ 0.63
RNF43-206ENST00000582293 DTNBO60941 627 aa18.97■□□□□ 0.63
RNF43-206ENST00000582293 ANKRD1Q15327 319 aa18.97■□□□□ 0.63
RNF43-206ENST00000582293 MFSD14CQ5VZR4 134 aa18.97■□□□□ 0.63
RNF43-206ENST00000582293 KATNBL1Q9H079 304 aa18.97■□□□□ 0.63
RNF43-206ENST00000582293 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.97■□□□□ 0.633e-6■■■■□ 19.8
RNF43-206ENST00000582293 SEC63Q9UGP8 760 aaKnown RBP18.97■□□□□ 0.63
RNF43-206ENST00000582293 RPTORQ8N122 1335 aa18.97■□□□□ 0.63
RNF43-206ENST00000582293 SYNGAP1Q96PV0 1343 aa18.97■□□□□ 0.63
RNF43-206ENST00000582293 PRPF3O43395 683 aaKnown RBP18.96■□□□□ 0.63
RNF43-206ENST00000582293 CTDNEP1O95476 244 aa18.96■□□□□ 0.63
RNF43-206ENST00000582293 CFBP00751 764 aa18.96■□□□□ 0.63
RNF43-206ENST00000582293 ZNF865P0CJ78 1059 aaPredicted RBP18.96■□□□□ 0.63
RNF43-206ENST00000582293 ALDH5A1P51649 535 aaPredicted RBP18.96■□□□□ 0.63
RNF43-206ENST00000582293 ARMCX2Q7L311 632 aa18.96■□□□□ 0.63
RNF43-206ENST00000582293 MSL3Q8N5Y2 521 aaKnown RBP18.96■□□□□ 0.63
RNF43-206ENST00000582293 MORC4Q8TE76 937 aa18.96■□□□□ 0.63
RNF43-206ENST00000582293 TAAR1Q96RJ0 339 aa18.96■□□□□ 0.63
RNF43-206ENST00000582293 MAF1Q9H063 256 aa18.96■□□□□ 0.63
RNF43-206ENST00000582293 UPF2Q9HAU5 1272 aaKnown RBP18.96■□□□□ 0.63
RNF43-206ENST00000582293 STXBP3O00186 592 aa18.95■□□□□ 0.62
RNF43-206ENST00000582293 HOXA13P31271 388 aaPredicted RBP18.95■□□□□ 0.62
RNF43-206ENST00000582293 SOX10P56693 466 aa18.95■□□□□ 0.62
RNF43-206ENST00000582293 PFKFB3Q16875 520 aaPredicted RBP18.95■□□□□ 0.62
RNF43-206ENST00000582293 MCF2L2Q86YR7 1114 aa18.95■□□□□ 0.62
RNF43-206ENST00000582293 NECAB1Q8N987 351 aa18.95■□□□□ 0.62
RNF43-206ENST00000582293 RNF208Q9H0X6 261 aa18.95■□□□□ 0.62
RNF43-206ENST00000582293 HMX1Q9NP08 348 aaPredicted RBP18.95■□□□□ 0.62
RNF43-206ENST00000582293 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.95■□□□□ 0.62
RNF43-206ENST00000582293 MEIS2O14770 477 aa18.94■□□□□ 0.62
RNF43-206ENST00000582293 ADAMTS3O15072 1205 aa18.94■□□□□ 0.62
RNF43-206ENST00000582293 CD2BP2O95400 341 aaKnown RBP18.94■□□□□ 0.62
RNF43-206ENST00000582293 EDNRBP24530 442 aa18.94■□□□□ 0.62
RNF43-206ENST00000582293 TRAF1Q13077 416 aa18.94■□□□□ 0.62
RNF43-206ENST00000582293 RABEP1Q15276 862 aa18.94■□□□□ 0.62
RNF43-206ENST00000582293 LHX8Q68G74 356 aa18.94■□□□□ 0.62
RNF43-206ENST00000582293 HEATR3Q7Z4Q2 680 aa18.94■□□□□ 0.62
RNF43-206ENST00000582293 RNF26Q9BY78 433 aaPredicted RBP18.94■□□□□ 0.62
RNF43-206ENST00000582293 SLKQ9H2G2 1235 aaPredicted RBP18.94■□□□□ 0.62
RNF43-206ENST00000582293 FRMPD3Q5JV73 1810 aa18.94■□□□□ 0.62
RNF43-206ENST00000582293 GJB1P08034 283 aa18.93■□□□□ 0.62
RNF43-206ENST00000582293 SCG2P13521 617 aa18.93■□□□□ 0.62
RNF43-206ENST00000582293 GTF3C6Q969F1 213 aa18.93■□□□□ 0.62
RNF43-206ENST00000582293 SLC26A6Q9BXS9 759 aa18.93■□□□□ 0.62
RNF43-206ENST00000582293 BARHL2Q9NY43 387 aa18.93■□□□□ 0.62
RNF43-206ENST00000582293 ASB14A6NK59 587 aa18.92■□□□□ 0.62
RNF43-206ENST00000582293 GCOM1H8Y6P7 765 aaPredicted RBP18.92■□□□□ 0.62
RNF43-206ENST00000582293 PIK3CDO00329 1044 aa18.92■□□□□ 0.62
RNF43-206ENST00000582293 ADCY6O43306 1168 aa18.92■□□□□ 0.62
RNF43-206ENST00000582293 POLR2MP0CAP2 368 aa18.92■□□□□ 0.62
RNF43-206ENST00000582293 EN2P19622 333 aaPredicted RBP18.92■□□□□ 0.62
RNF43-206ENST00000582293 GJA8P48165 433 aa18.92■□□□□ 0.62
RNF43-206ENST00000582293 USP17L6PQ6QN14 398 aa18.92■□□□□ 0.62
RNF43-206ENST00000582293 SAMD3Q8N6K7 520 aa18.92■□□□□ 0.62
RNF43-206ENST00000582293 DNERQ8NFT8 737 aa18.92■□□□□ 0.62
RNF43-206ENST00000582293 DEFB118Q96PH6 123 aa18.92■□□□□ 0.62
RNF43-206ENST00000582293 CRISPLD2Q9H0B8 497 aa18.92■□□□□ 0.62
RNF43-206ENST00000582293 MAP3K20Q9NYL2 800 aaKnown RBP18.92■□□□□ 0.62
RNF43-206ENST00000582293 NRBP1Q9UHY1 535 aa18.92■□□□□ 0.62
RNF43-206ENST00000582293 LIMCH1Q9UPQ0 1083 aa18.92■□□□□ 0.62
RNF43-206ENST00000582293 hCG_1984214I3L0E3 225 aa18.91■□□□□ 0.62
RNF43-206ENST00000582293 SGPL1O95470 568 aa18.91■□□□□ 0.62
RNF43-206ENST00000582293 ACVR2BQ13705 512 aa18.91■□□□□ 0.62
RNF43-206ENST00000582293 ZNF713Q8N859 430 aaPredicted RBP18.91■□□□□ 0.62
RNF43-206ENST00000582293 IL31RAQ8NI17 732 aa18.91■□□□□ 0.62
RNF43-206ENST00000582293 U2AF1L4Q8WU68 220 aaKnown RBP18.91■□□□□ 0.62
RNF43-206ENST00000582293 AIFM3Q96NN9 605 aa18.91■□□□□ 0.62
RNF43-206ENST00000582293 PXMP2Q9NR77 195 aa18.91■□□□□ 0.62
RNF43-206ENST00000582293 ADD3Q9UEY8 706 aaKnown RBP18.91■□□□□ 0.62
RNF43-206ENST00000582293 FRMPD4Q14CM0 1322 aa18.91■□□□□ 0.62
RNF43-206ENST00000582293 LOC102724159A0A0B4J2E5 919 aa18.9■□□□□ 0.62
RNF43-206ENST00000582293 SEPT4O43236 478 aa18.9■□□□□ 0.62
RNF43-206ENST00000582293 CAPN15O75808 1086 aa18.9■□□□□ 0.62
RNF43-206ENST00000582293 EIF2AK2P19525 551 aaKnown RBP18.9■□□□□ 0.62
RNF43-206ENST00000582293 PWP2Q15269 919 aaKnown RBP18.9■□□□□ 0.62
RNF43-206ENST00000582293 UBE2SQ16763 222 aa18.9■□□□□ 0.62
RNF43-206ENST00000582293 TMEM63BQ5T3F8 832 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms