RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 CCDC12Q8WUD4 166 aaPredicted RBP23.1■■□□□ 1.29
TOP3A-213ENST00000582230 GPKOWQ92917 476 aaPredicted RBP eCLIP23.1■■□□□ 1.29
TOP3A-213ENST00000582230 MAML3Q96JK9 1138 aa23.1■■□□□ 1.29
TOP3A-213ENST00000582230 GCOM1H8Y6P7 765 aaPredicted RBP23.09■■□□□ 1.29
TOP3A-213ENST00000582230 STXBP3O00186 592 aa23.09■■□□□ 1.29
TOP3A-213ENST00000582230 PPFIA3O75145 1194 aa23.09■■□□□ 1.29
TOP3A-213ENST00000582230 CFBP00751 764 aa23.09■■□□□ 1.29
TOP3A-213ENST00000582230 POLR2MP0CAP2 368 aa23.09■■□□□ 1.29
TOP3A-213ENST00000582230 CALML3P27482 149 aa23.09■■□□□ 1.29
TOP3A-213ENST00000582230 HSD17B4P51659 736 aa23.09■■□□□ 1.29
TOP3A-213ENST00000582230 NAPAP54920 295 aa23.09■■□□□ 1.29
TOP3A-213ENST00000582230 SLC9C1Q4G0N8 1177 aa23.09■■□□□ 1.29
TOP3A-213ENST00000582230 SLC30A10Q6XR72 485 aa23.09■■□□□ 1.29
TOP3A-213ENST00000582230 CCDC83Q8IWF9 413 aa23.09■■□□□ 1.29
TOP3A-213ENST00000582230 MSL3Q8N5Y2 521 aaKnown RBP23.09■■□□□ 1.29
TOP3A-213ENST00000582230 TMX3Q96JJ7 454 aa23.09■■□□□ 1.29
TOP3A-213ENST00000582230 PSTPIP2Q9H939 334 aa23.09■■□□□ 1.29
TOP3A-213ENST00000582230 ADD3Q9UEY8 706 aaKnown RBP23.09■■□□□ 1.29
TOP3A-213ENST00000582230 PLXNB2O15031 1838 aa23.08■■□□□ 1.29
TOP3A-213ENST00000582230 HMGCRP04035 888 aa23.08■■□□□ 1.29
TOP3A-213ENST00000582230 CNTN2Q02246 1040 aa23.08■■□□□ 1.29
TOP3A-213ENST00000582230 ST3GAL1Q11201 340 aa23.08■■□□□ 1.29
TOP3A-213ENST00000582230 NSUN7Q8NE18 718 aaKnown RBP23.08■■□□□ 1.29
TOP3A-213ENST00000582230 WASF1Q92558 559 aa23.08■■□□□ 1.29
TOP3A-213ENST00000582230 TBC1D5Q92609 795 aa23.08■■□□□ 1.29
TOP3A-213ENST00000582230 CUL5Q93034 780 aa23.08■■□□□ 1.29
TOP3A-213ENST00000582230 GLT8D2Q9H1C3 349 aa23.08■■□□□ 1.29
TOP3A-213ENST00000582230 SH3GLB2Q9NR46 395 aa23.08■■□□□ 1.29
TOP3A-213ENST00000582230 LOC102724159A0A0B4J2E5 919 aa23.07■■□□□ 1.28
TOP3A-213ENST00000582230 PIK3CDO00329 1044 aa23.07■■□□□ 1.28
TOP3A-213ENST00000582230 ELNP15502 786 aa23.07■■□□□ 1.28
TOP3A-213ENST00000582230 PWP2Q15269 919 aaKnown RBP23.07■■□□□ 1.28
TOP3A-213ENST00000582230 CCL14Q16627 93 aa23.07■■□□□ 1.28
TOP3A-213ENST00000582230 MFSD14CQ5VZR4 134 aa23.07■■□□□ 1.28
TOP3A-213ENST00000582230 FAM177A1Q8N128 213 aaPredicted RBP23.07■■□□□ 1.28
TOP3A-213ENST00000582230 DNERQ8NFT8 737 aa23.07■■□□□ 1.28
TOP3A-213ENST00000582230 SYTL5Q8TDW5 730 aaPredicted RBP23.07■■□□□ 1.28
TOP3A-213ENST00000582230 TRIB2Q92519 343 aa23.07■■□□□ 1.28
TOP3A-213ENST00000582230 ORC3Q9UBD5 711 aaPredicted RBP23.07■■□□□ 1.28
TOP3A-213ENST00000582230 BAZ2BQ9UIF8 2168 aaKnown RBP23.07■■□□□ 1.28
TOP3A-213ENST00000582230 ESYT2A0FGR8 921 aa23.06■■□□□ 1.28
TOP3A-213ENST00000582230 SOWAHBA6NEL2 793 aa23.06■■□□□ 1.28
TOP3A-213ENST00000582230 IGHA2P01877 340 aa23.06■■□□□ 1.28
TOP3A-213ENST00000582230 MRPL12P52815 198 aaKnown RBP23.06■■□□□ 1.28
TOP3A-213ENST00000582230 MAMDC4Q6UXC1 1216 aa23.06■■□□□ 1.28
TOP3A-213ENST00000582230 CCDC148Q8NFR7 591 aa23.06■■□□□ 1.28
TOP3A-213ENST00000582230 FLRT1Q9NZU1 646 aa23.06■■□□□ 1.28
TOP3A-213ENST00000582230 BIN2Q9UBW5 565 aaPredicted RBP23.06■■□□□ 1.28
TOP3A-213ENST00000582230 SMCO2A6NFE2 343 aa23.05■■□□□ 1.28
TOP3A-213ENST00000582230 ASB14A6NK59 587 aa23.05■■□□□ 1.28
TOP3A-213ENST00000582230 B4DLN1 442 aa23.05■■□□□ 1.28
TOP3A-213ENST00000582230 XBP1P17861 261 aa23.05■■□□□ 1.28
TOP3A-213ENST00000582230 HMGN5P82970 282 aaKnown RBP23.05■■□□□ 1.28
TOP3A-213ENST00000582230 TYW1BQ6NUM6 668 aa23.05■■□□□ 1.28
TOP3A-213ENST00000582230 SNX21Q969T3 373 aa23.05■■□□□ 1.28
TOP3A-213ENST00000582230 FGD4Q96M96 766 aa23.05■■□□□ 1.28
TOP3A-213ENST00000582230 MPHOSPH6Q99547 160 aaKnown RBP23.05■■□□□ 1.28
TOP3A-213ENST00000582230 TINF2Q9BSI4 451 aa23.05■■□□□ 1.28
TOP3A-213ENST00000582230 RIC8AQ9NPQ8 531 aa23.05■■□□□ 1.28
TOP3A-213ENST00000582230 SYNGAP1Q96PV0 1343 aa23.05■■□□□ 1.28
TOP3A-213ENST00000582230 MEIS2O14770 477 aa23.04■■□□□ 1.28
TOP3A-213ENST00000582230 GNA11P29992 359 aa23.04■■□□□ 1.28
TOP3A-213ENST00000582230 HOXA13P31271 388 aaPredicted RBP23.04■■□□□ 1.28
TOP3A-213ENST00000582230 ADCY7P51828 1080 aa23.04■■□□□ 1.28
TOP3A-213ENST00000582230 UBXN2AP68543 259 aa23.04■■□□□ 1.28
TOP3A-213ENST00000582230 SMARCC2Q8TAQ2 1214 aa23.04■■□□□ 1.28
TOP3A-213ENST00000582230 NSUN6Q8TEA1 469 aaKnown RBP23.04■■□□□ 1.28
TOP3A-213ENST00000582230 SH3TC2Q8TF17 1288 aa23.04■■□□□ 1.28
TOP3A-213ENST00000582230 ARMC5Q96C12 935 aa23.04■■□□□ 1.28
TOP3A-213ENST00000582230 ZMYND12Q9H0C1 365 aa23.04■■□□□ 1.28
TOP3A-213ENST00000582230 C6orf50Q9HD87 102 aa23.04■■□□□ 1.28
TOP3A-213ENST00000582230 DOCK3Q8IZD9 2030 aa23.03■■□□□ 1.28
TOP3A-213ENST00000582230 JAK2O60674 1132 aa23.03■■□□□ 1.28
TOP3A-213ENST00000582230 INHAP05111 366 aa23.03■■□□□ 1.28
TOP3A-213ENST00000582230 FDPSP14324 419 aaKnown RBP23.03■■□□□ 1.28
TOP3A-213ENST00000582230 ALDH5A1P51649 535 aaPredicted RBP23.03■■□□□ 1.28
TOP3A-213ENST00000582230 PURBQ96QR8 312 aaKnown RBP23.03■■□□□ 1.28
TOP3A-213ENST00000582230 TAAR1Q96RJ0 339 aa23.03■■□□□ 1.28
TOP3A-213ENST00000582230 RMDN3Q96TC7 470 aa23.03■■□□□ 1.28
TOP3A-213ENST00000582230 VPS54Q9P1Q0 977 aa23.03■■□□□ 1.28
TOP3A-213ENST00000582230 COL20A1Q9P218 1284 aa23.03■■□□□ 1.28
TOP3A-213ENST00000582230 NRBP1Q9UHY1 535 aa23.03■■□□□ 1.28
TOP3A-213ENST00000582230 MYH6P13533 1939 aa23.03■■□□□ 1.28
TOP3A-213ENST00000582230 CYP2C19P33261 490 aa23.02■■□□□ 1.28
TOP3A-213ENST00000582230 ARHGEF16Q5VV41 709 aa23.02■■□□□ 1.28
TOP3A-213ENST00000582230 USP17L6PQ6QN14 398 aa23.02■■□□□ 1.28
TOP3A-213ENST00000582230 BICD2Q8TD16 824 aa23.02■■□□□ 1.28
TOP3A-213ENST00000582230 MORC4Q8TE76 937 aa23.02■■□□□ 1.28
TOP3A-213ENST00000582230 IWS1Q96ST2 819 aa23.02■■□□□ 1.28
TOP3A-213ENST00000582230 ALG1Q9BT22 464 aa23.02■■□□□ 1.28
TOP3A-213ENST00000582230 SMCHD1A6NHR9 2005 aa23.02■■□□□ 1.28
TOP3A-213ENST00000582230 NLRP5P59047 1200 aa23.01■■□□□ 1.27
TOP3A-213ENST00000582230 MAP3K21Q5TCX8 1036 aa23.01■■□□□ 1.27
TOP3A-213ENST00000582230 MCTP2Q6DN12 878 aa23.01■■□□□ 1.27
TOP3A-213ENST00000582230 GALNT17Q6IS24 598 aa23.01■■□□□ 1.27
TOP3A-213ENST00000582230 ARMCX2Q7L311 632 aa23.01■■□□□ 1.27
TOP3A-213ENST00000582230 FCHSD1Q86WN1 690 aa23.01■■□□□ 1.27
TOP3A-213ENST00000582230 ZNF333Q96JL9 665 aa23.01■■□□□ 1.27
TOP3A-213ENST00000582230 CNPY2Q9Y2B0 182 aa23.01■■□□□ 1.27
TOP3A-213ENST00000582230 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms