RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 MROH7Q68CQ1 1323 aa14.66□□□□□ -0.06
CDK5RAP3-222ENST00000581708 LCTP09848 1927 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 RBM47A0AV96 593 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 ZBTB5O15062 677 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 NKRFO15226 690 aaKnown RBP eCLIP14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 DHX16O60231 1041 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 ZEB2O60315 1214 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 C6orf222P0C671 652 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 SMARCA1P28370 1054 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 MCM5P33992 734 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 TROAPQ12815 778 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 TMEM67Q5HYA8 995 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 GNASQ5JWF2 1037 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 SLC30A10Q6XR72 485 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 STOX1Q6ZVD7 989 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 FERMT2Q96AC1 680 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 AP5M1Q9H0R1 490 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 RIOX1Q9H6W3 641 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 ANO2Q9NQ90 1003 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 STARD7Q9NQZ5 370 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 LRRC37A2A6NM11 1700 aa14.65□□□□□ -0.06
CDK5RAP3-222ENST00000581708 ADCY6O43306 1168 aa14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 CDC45O75419 566 aa14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 DDAH1O94760 285 aa14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 NEFLP07196 543 aa14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 SYN1P17600 705 aa14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 CALML3P27482 149 aa14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 KIF5BP33176 963 aa14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 USH1GQ495M9 461 aa14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 TRIM60Q495X7 471 aa14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 DUSP28Q4G0W2 176 aa14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 NOL8Q76FK4 1167 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 TLK2Q86UE8 772 aa14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 STAG2Q8N3U4 1231 aa14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 NSUN6Q8TEA1 469 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 LENG1Q96BZ8 264 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 IWS1Q96ST2 819 aa14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 LZTS2Q9BRK4 669 aa14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 CPVLQ9H3G5 476 aa14.64□□□□□ -0.07
CDK5RAP3-222ENST00000581708 MYH6P13533 1939 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 DCDC2CA8MYV0 355 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 SLC27A2O14975 620 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 ASGR1P07306 291 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 CALM1P0DP23 149 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 CALM2P0DP24 149 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 CALM3P0DP25 149 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 SMPD1P17405 629 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 LIFRP42702 1097 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 GNAQP50148 359 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 ANTXR2P58335 489 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 TLE2Q04725 743 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 PDE4DQ08499 809 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 LRIT3Q3SXY7 679 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 TSGA10IPQ3SY00 556 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 ERICH6BQ5W0A0 696 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 CREB3L3Q68CJ9 461 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 GPR153Q6NV75 609 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 TDHQ8IZJ6 230 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 SCFD2Q8WU76 684 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 UBE2OQ9C0C9 1292 aaKnown RBP14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 PCDH10Q9P2E7 1040 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 TAF6LQ9Y6J9 622 aa14.63□□□□□ -0.07
CDK5RAP3-222ENST00000581708 PNMA6FA0A0J9YX94 578 aa14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 A0A0U1RQG5 324 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 KIAA0355O15063 1070 aa14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 CTAGE5O15320 804 aa14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 PRC1O43663 620 aa14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 CLTBP09497 229 aa14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 CDK7P50613 346 aa14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 KRT32Q14532 448 aa14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 FSCN1Q16658 493 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 BRDTQ58F21 947 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 FBXO16Q8IX29 292 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 CTCFLQ8NI51 663 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 SYTL5Q8TDW5 730 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 PURBQ96QR8 312 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 WDR11Q9BZH6 1224 aa14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 LY9Q9HBG7 655 aa14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 VAT1LQ9HCJ6 419 aa14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 PDLIM7Q9NR12 457 aa14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 PCDHA1Q9Y5I3 950 aa14.62□□□□□ -0.07
CDK5RAP3-222ENST00000581708 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.61□□□□□ -0.07
CDK5RAP3-222ENST00000581708 ARVCFO00192 962 aa14.61□□□□□ -0.07
CDK5RAP3-222ENST00000581708 DYNC1LI2O43237 492 aaPredicted RBP14.61□□□□□ -0.07
CDK5RAP3-222ENST00000581708 KPNA6O60684 536 aa14.61□□□□□ -0.07
CDK5RAP3-222ENST00000581708 CPT1AP50416 773 aa14.61□□□□□ -0.07
CDK5RAP3-222ENST00000581708 HSD17B4P51659 736 aa14.61□□□□□ -0.07
CDK5RAP3-222ENST00000581708 EEPD1Q7L9B9 569 aa14.61□□□□□ -0.07
CDK5RAP3-222ENST00000581708 ZNF654Q8IZM8 581 aa14.61□□□□□ -0.07
CDK5RAP3-222ENST00000581708 RMDN3Q96TC7 470 aa14.61□□□□□ -0.07
CDK5RAP3-222ENST00000581708 SPZ1Q9BXG8 430 aa14.61□□□□□ -0.07
CDK5RAP3-222ENST00000581708 PDGFCQ9NRA1 345 aa14.61□□□□□ -0.07
CDK5RAP3-222ENST00000581708 LTBP2Q14767 1821 aa14.6□□□□□ -0.07
CDK5RAP3-222ENST00000581708 MYADML2A6NDP7 307 aa14.6□□□□□ -0.07
CDK5RAP3-222ENST00000581708 CCDC69A6NI79 296 aa14.6□□□□□ -0.07
CDK5RAP3-222ENST00000581708 SH2B2O14492 632 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-222ENST00000581708 HMGB1P09429 215 aaKnown RBP14.6□□□□□ -0.07
CDK5RAP3-222ENST00000581708 PPP2R5BQ15173 497 aa14.6□□□□□ -0.07
CDK5RAP3-222ENST00000581708 STXBP2Q15833 593 aa14.6□□□□□ -0.07
CDK5RAP3-222ENST00000581708 CHST3Q7LGC8 479 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms