RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PDGFCQ9NRA1 345 aa22.69■■□□□ 1.22
SREBF1-220ENST00000581707 A0A1W2PQ45 241 aaPredicted RBP22.68■■□□□ 1.22
SREBF1-220ENST00000581707 A0A1W2PQY0 241 aa22.68■■□□□ 1.22
SREBF1-220ENST00000581707 MYADML2A6NDP7 307 aa22.68■■□□□ 1.22
SREBF1-220ENST00000581707 MOXD2PA6NHM9 499 aa22.68■■□□□ 1.22
SREBF1-220ENST00000581707 CST5P28325 142 aaPredicted RBP22.68■■□□□ 1.22
SREBF1-220ENST00000581707 IRX5P78411 483 aaPredicted RBP22.68■■□□□ 1.22
SREBF1-220ENST00000581707 TRIM60Q495X7 471 aa22.68■■□□□ 1.22
SREBF1-220ENST00000581707 C1orf53Q5VUE5 145 aa22.68■■□□□ 1.22
SREBF1-220ENST00000581707 CCSAPQ6IQ19 270 aaPredicted RBP22.68■■□□□ 1.22
SREBF1-220ENST00000581707 MCF2L2Q86YR7 1114 aa22.68■■□□□ 1.22
SREBF1-220ENST00000581707 PCSK9Q8NBP7 692 aaKnown RBP22.68■■□□□ 1.22
SREBF1-220ENST00000581707 TBC1D5Q92609 795 aa22.68■■□□□ 1.22
SREBF1-220ENST00000581707 TMEM87BQ96K49 555 aa22.68■■□□□ 1.22
SREBF1-220ENST00000581707 MPHOSPH6Q99547 160 aaKnown RBP22.68■■□□□ 1.22
SREBF1-220ENST00000581707 GDF15Q99988 308 aa22.68■■□□□ 1.22
SREBF1-220ENST00000581707 AMNQ9BXJ7 453 aa22.68■■□□□ 1.22
SREBF1-220ENST00000581707 GPHNQ9NQX3 736 aaPredicted RBP22.68■■□□□ 1.22
SREBF1-220ENST00000581707 ZBTB5O15062 677 aa22.67■■□□□ 1.22
SREBF1-220ENST00000581707 MAGEA10P43363 369 aaPredicted RBP22.67■■□□□ 1.22
SREBF1-220ENST00000581707 GNASQ5JWF2 1037 aa22.67■■□□□ 1.22
SREBF1-220ENST00000581707 TMTC2Q8N394 836 aa22.67■■□□□ 1.22
SREBF1-220ENST00000581707 NUP133Q8WUM0 1156 aa22.67■■□□□ 1.22
SREBF1-220ENST00000581707 RIOX1Q9H6W3 641 aa22.67■■□□□ 1.22
SREBF1-220ENST00000581707 GNEQ9Y223 722 aaKnown RBP22.67■■□□□ 1.22
SREBF1-220ENST00000581707 B4DLN1 442 aa22.66■■□□□ 1.22
SREBF1-220ENST00000581707 SMPD1P17405 629 aa22.66■■□□□ 1.22
SREBF1-220ENST00000581707 BMP8BP34820 402 aa22.66■■□□□ 1.22
SREBF1-220ENST00000581707 MRPL12P52815 198 aaKnown RBP22.66■■□□□ 1.22
SREBF1-220ENST00000581707 PDE4DQ08499 809 aa22.66■■□□□ 1.22
SREBF1-220ENST00000581707 COL9A3Q14050 684 aaPredicted RBP22.66■■□□□ 1.22
SREBF1-220ENST00000581707 SLC35G1Q2M3R5 365 aa22.66■■□□□ 1.22
SREBF1-220ENST00000581707 ZNF654Q8IZM8 581 aa22.66■■□□□ 1.22
SREBF1-220ENST00000581707 MAP3K14Q99558 947 aa22.66■■□□□ 1.22
SREBF1-220ENST00000581707 AP5M1Q9H0R1 490 aa22.66■■□□□ 1.22
SREBF1-220ENST00000581707 PRKAG2Q9UGJ0 569 aa22.66■■□□□ 1.22
SREBF1-220ENST00000581707 SH2B2O14492 632 aaPredicted RBP22.65■■□□□ 1.22
SREBF1-220ENST00000581707 CTAGE5O15320 804 aa22.65■■□□□ 1.22
SREBF1-220ENST00000581707 PPP1R11O60927 126 aaPredicted RBP22.65■■□□□ 1.22
SREBF1-220ENST00000581707 SLC34A2O95436 690 aa22.65■■□□□ 1.22
SREBF1-220ENST00000581707 ASGR1P07306 291 aa22.65■■□□□ 1.22
SREBF1-220ENST00000581707 NKX3-2P78367 333 aa22.65■■□□□ 1.22
SREBF1-220ENST00000581707 NFXL1Q6ZNB6 911 aa22.65■■□□□ 1.22
SREBF1-220ENST00000581707 TLK2Q86UE8 772 aa22.65■■□□□ 1.22
SREBF1-220ENST00000581707 HOMER1Q86YM7 354 aa22.65■■□□□ 1.22
SREBF1-220ENST00000581707 SYTL5Q8TDW5 730 aaPredicted RBP22.65■■□□□ 1.22
SREBF1-220ENST00000581707 STARD7Q9NQZ5 370 aa22.65■■□□□ 1.22
SREBF1-220ENST00000581707 PCDH10Q9P2E7 1040 aa22.65■■□□□ 1.22
SREBF1-220ENST00000581707 Q9Y3F1 56 aa22.65■■□□□ 1.22
SREBF1-220ENST00000581707 A0A1W2PPC1 479 aa22.64■■□□□ 1.21
SREBF1-220ENST00000581707 CCDC69A6NI79 296 aa22.64■■□□□ 1.21
SREBF1-220ENST00000581707 DYNC1LI2O43237 492 aaPredicted RBP22.64■■□□□ 1.21
SREBF1-220ENST00000581707 CYTH3O43739 400 aa22.64■■□□□ 1.21
SREBF1-220ENST00000581707 DDAH1O94760 285 aa22.64■■□□□ 1.21
SREBF1-220ENST00000581707 EDNRBP24530 442 aa22.64■■□□□ 1.21
SREBF1-220ENST00000581707 LIFRP42702 1097 aa22.64■■□□□ 1.21
SREBF1-220ENST00000581707 TLE2Q04725 743 aa22.64■■□□□ 1.21
SREBF1-220ENST00000581707 TRAF1Q13077 416 aa22.64■■□□□ 1.21
SREBF1-220ENST00000581707 TMEM63BQ5T3F8 832 aa22.64■■□□□ 1.21
SREBF1-220ENST00000581707 CTCFLQ8NI51 663 aaPredicted RBP22.64■■□□□ 1.21
SREBF1-220ENST00000581707 GLT1D1Q96MS3 346 aa22.64■■□□□ 1.21
SREBF1-220ENST00000581707 TAAR1Q96RJ0 339 aa22.64■■□□□ 1.21
SREBF1-220ENST00000581707 PIGSQ96S52 555 aa22.64■■□□□ 1.21
SREBF1-220ENST00000581707 MYL10Q9BUA6 226 aa22.64■■□□□ 1.21
SREBF1-220ENST00000581707 WDR11Q9BZH6 1224 aa22.64■■□□□ 1.21
SREBF1-220ENST00000581707 PCDHA1Q9Y5I3 950 aa22.64■■□□□ 1.21
SREBF1-220ENST00000581707 ELP1O95163 1332 aa22.63■■□□□ 1.21
SREBF1-220ENST00000581707 PNMA6FA0A0J9YX94 578 aa22.63■■□□□ 1.21
SREBF1-220ENST00000581707 RBM47A0AV96 593 aaKnown RBP22.63■■□□□ 1.21
SREBF1-220ENST00000581707 CFBP00751 764 aa22.63■■□□□ 1.21
SREBF1-220ENST00000581707 PTGS1P23219 599 aa22.63■■□□□ 1.21
SREBF1-220ENST00000581707 KIF5BP33176 963 aa22.63■■□□□ 1.21
SREBF1-220ENST00000581707 FXR1P51114 621 aaKnown RBP eCLIP22.63■■□□□ 1.21
SREBF1-220ENST00000581707 MDM2Q00987 491 aaPredicted RBP22.63■■□□□ 1.21
SREBF1-220ENST00000581707 BEX3Q00994 111 aa22.63■■□□□ 1.21
SREBF1-220ENST00000581707 DUSP28Q4G0W2 176 aa22.63■■□□□ 1.21
SREBF1-220ENST00000581707 NSUN6Q8TEA1 469 aaKnown RBP22.63■■□□□ 1.21
SREBF1-220ENST00000581707 VTI1AQ96AJ9 217 aa22.63■■□□□ 1.21
SREBF1-220ENST00000581707 LBHD1Q9BQE6 289 aaPredicted RBP22.63■■□□□ 1.21
SREBF1-220ENST00000581707 COL20A1Q9P218 1284 aa22.63■■□□□ 1.21
SREBF1-220ENST00000581707 OPLAHO14841 1288 aa22.62■■□□□ 1.21
SREBF1-220ENST00000581707 FSCN1Q16658 493 aaKnown RBP22.62■■□□□ 1.21
SREBF1-220ENST00000581707 TSGA10IPQ3SY00 556 aa22.62■■□□□ 1.21
SREBF1-220ENST00000581707 RASEFQ8IZ41 740 aa22.62■■□□□ 1.21
SREBF1-220ENST00000581707 NEK1Q96PY6 1258 aa22.62■■□□□ 1.21
SREBF1-220ENST00000581707 RMDN3Q96TC7 470 aa22.62■■□□□ 1.21
SREBF1-220ENST00000581707 LRRC2Q9BYS8 371 aa22.62■■□□□ 1.21
SREBF1-220ENST00000581707 PRDM5Q9NQX1 630 aaPredicted RBP22.62■■□□□ 1.21
SREBF1-220ENST00000581707 ZEB2O60315 1214 aa22.61■■□□□ 1.21
SREBF1-220ENST00000581707 PQBP1O60828 265 aaKnown RBP22.61■■□□□ 1.21
SREBF1-220ENST00000581707 HSD17B4P51659 736 aa22.61■■□□□ 1.21
SREBF1-220ENST00000581707 IWS1Q96ST2 819 aa22.61■■□□□ 1.21
SREBF1-220ENST00000581707 LZTS2Q9BRK4 669 aa22.61■■□□□ 1.21
SREBF1-220ENST00000581707 UBE2OQ9C0C9 1292 aaKnown RBP22.61■■□□□ 1.21
SREBF1-220ENST00000581707 PPP4R2Q9NY27 417 aa22.61■■□□□ 1.21
SREBF1-220ENST00000581707 SLC12A7Q9Y666 1083 aa22.61■■□□□ 1.21
SREBF1-220ENST00000581707 CALM1P0DP23 149 aa22.6■■□□□ 1.21
SREBF1-220ENST00000581707 CALM2P0DP24 149 aa22.6■■□□□ 1.21
SREBF1-220ENST00000581707 CALM3P0DP25 149 aa22.6■■□□□ 1.21
SREBF1-220ENST00000581707 GNAQP50148 359 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms