RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CNKSR3Q6P9H4 555 aa7□□□□□ -1.29
SMCHD1-205ENST00000581383 EEPD1Q7L9B9 569 aa7□□□□□ -1.29
SMCHD1-205ENST00000581383 SMARCC1Q92922 1105 aaPredicted RBP7□□□□□ -1.29
SMCHD1-205ENST00000581383 BRF1Q92994 677 aa7□□□□□ -1.29
SMCHD1-205ENST00000581383 RAPGEFL1Q9UHV5 662 aa7□□□□□ -1.29
SMCHD1-205ENST00000581383 SF3B6Q9Y3B4 125 aaKnown RBP7□□□□□ -1.29
SMCHD1-205ENST00000581383 TLDC2A0PJX2 215 aa6.99□□□□□ -1.29
SMCHD1-205ENST00000581383 HOXA5P20719 270 aa6.99□□□□□ -1.29
SMCHD1-205ENST00000581383 ERVFRD-1P60508 538 aa6.99□□□□□ -1.29
SMCHD1-205ENST00000581383 IFRD2Q12894 506 aaPredicted RBP6.99□□□□□ -1.29
SMCHD1-205ENST00000581383 RASGRF1Q13972 1273 aa6.99□□□□□ -1.29
SMCHD1-205ENST00000581383 MTERF2Q49AM1 385 aa6.99□□□□□ -1.29
SMCHD1-205ENST00000581383 ERICH6BQ5W0A0 696 aa6.99□□□□□ -1.29
SMCHD1-205ENST00000581383 DCAF15Q66K64 600 aa6.99□□□□□ -1.29
SMCHD1-205ENST00000581383 PANK1Q8TE04 598 aa6.99□□□□□ -1.29
SMCHD1-205ENST00000581383 MZB1Q8WU39 189 aa6.99□□□□□ -1.29
SMCHD1-205ENST00000581383 RELTQ969Z4 430 aa6.99□□□□□ -1.29
SMCHD1-205ENST00000581383 PRR13Q9NZ81 148 aa6.99□□□□□ -1.29
SMCHD1-205ENST00000581383 ITGA4P13612 1032 aa6.98□□□□□ -1.29
SMCHD1-205ENST00000581383 BUD31P41223 144 aaPredicted RBP6.98□□□□□ -1.29
SMCHD1-205ENST00000581383 CTSKP43235 329 aa6.98□□□□□ -1.29
SMCHD1-205ENST00000581383 VMACQ2NL98 169 aa6.98□□□□□ -1.29
SMCHD1-205ENST00000581383 HEATR6Q6AI08 1181 aaKnown RBP6.98□□□□□ -1.29
SMCHD1-205ENST00000581383 BICRALQ6AI39 1079 aa6.98□□□□□ -1.29
SMCHD1-205ENST00000581383 HAUS7Q99871 368 aa6.98□□□□□ -1.29
SMCHD1-205ENST00000581383 CNTD2Q9H8S5 307 aa6.98□□□□□ -1.29
SMCHD1-205ENST00000581383 PFDN2Q9UHV9 154 aa6.98□□□□□ -1.29
SMCHD1-205ENST00000581383 SUSD5O60279 629 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 TBC1D8O95759 1140 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 EFEMP2O95967 443 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 EPHX1P07099 455 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 CD3EP07766 207 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 PFKLP17858 780 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 NCKAP1LP55160 1127 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 POU4F1Q01851 419 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 PPP2R5DQ14738 602 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 ZC3H14Q6PJT7 736 aaKnown RBP6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 SPATC1Q76KD6 591 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 ADAT2Q7Z6V5 191 aaKnown RBP6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 SLCO6A1Q86UG4 719 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 JAZF1Q86VZ6 243 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 LILRB2Q8N423 598 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 ZDHHC15Q96MV8 337 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 JMJD8Q96S16 334 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 NOL6Q9H6R4 1146 aaKnown RBP6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 KLHL14Q9P2G3 628 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 TMA7Q9Y2S6 64 aaKnown RBP6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 ZNF451Q9Y4E5 1061 aa6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 MRPL42Q9Y6G3 142 aaKnown RBP6.97□□□□□ -1.29
SMCHD1-205ENST00000581383 ANKRD34BA5PLL1 514 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 H0Y8X5 98 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 CBFA2T2O43439 604 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 BUB1BO60566 1050 aaPredicted RBP6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 DIAPH1O60610 1272 aaKnown RBP6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 CDR1P51861 262 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 YBX1P67809 324 aaKnown RBP6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 NR1I3Q14994 352 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 SV2CQ496J9 727 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 CYP2R1Q6VVX0 501 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 LDHDQ86WU2 507 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 NLGN1Q8N2Q7 840 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 FIBCD1Q8N539 461 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 ST13P5Q8NFI4 369 aaPredicted RBP6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 FGD4Q96M96 766 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 PWWP2AQ96N64 755 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 APBA2Q99767 749 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 GP6Q9HCN6 339 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 SUSD2Q9UGT4 822 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 FAN1Q9Y2M0 1017 aa6.96□□□□□ -1.3
SMCHD1-205ENST00000581383 SSRP1Q08945 709 aaKnown RBP6.95□□□□□ -1.3
SMCHD1-205ENST00000581383 NFIXQ14938 502 aa6.95□□□□□ -1.3
SMCHD1-205ENST00000581383 CABP7Q86V35 215 aa6.95□□□□□ -1.3
SMCHD1-205ENST00000581383 ZDHHC14Q8IZN3 488 aa6.95□□□□□ -1.3
SMCHD1-205ENST00000581383 MARCH10Q8NA82 808 aaPredicted RBP6.95□□□□□ -1.3
SMCHD1-205ENST00000581383 PPP1R14AQ96A00 147 aa6.95□□□□□ -1.3
SMCHD1-205ENST00000581383 KLHL25Q9H0H3 589 aa6.95□□□□□ -1.3
SMCHD1-205ENST00000581383 ACSL6Q9UKU0 697 aa6.95□□□□□ -1.3
SMCHD1-205ENST00000581383 TBX22Q9Y458 520 aa6.95□□□□□ -1.3
SMCHD1-205ENST00000581383 SHOXO15266 292 aa6.94□□□□□ -1.3
SMCHD1-205ENST00000581383 CD247P20963 164 aa6.94□□□□□ -1.3
SMCHD1-205ENST00000581383 ZNF445P59923 1031 aa6.94□□□□□ -1.3
SMCHD1-205ENST00000581383 SLC10A6Q3KNW5 377 aa6.94□□□□□ -1.3
SMCHD1-205ENST00000581383 ANKRD39Q53RE8 183 aa6.94□□□□□ -1.3
SMCHD1-205ENST00000581383 RPTNQ6XPR3 784 aa6.94□□□□□ -1.3
SMCHD1-205ENST00000581383 SP8Q8IXZ3 490 aa6.94□□□□□ -1.3
SMCHD1-205ENST00000581383 FAM177A1Q8N128 213 aaPredicted RBP6.94□□□□□ -1.3
SMCHD1-205ENST00000581383 RNPC3Q96LT9 517 aaKnown RBP6.94□□□□□ -1.3
SMCHD1-205ENST00000581383 SLC12A9Q9BXP2 914 aa6.94□□□□□ -1.3
SMCHD1-205ENST00000581383 GBP3Q9H0R5 595 aa6.94□□□□□ -1.3
SMCHD1-205ENST00000581383 FHOD1Q9Y613 1164 aa6.94□□□□□ -1.3
SMCHD1-205ENST00000581383 KDM2BQ8NHM5 1336 aa6.94□□□□□ -1.3
SMCHD1-205ENST00000581383 CADPSQ9ULU8 1353 aa6.94□□□□□ -1.3
SMCHD1-205ENST00000581383 TRIM13O60858 407 aa6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 PPM1BO75688 479 aa6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 NAT2P11245 290 aa6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 SYN1P17600 705 aa6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 TACR1P25103 407 aa6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 ZNF143P52747 638 aaPredicted RBP6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 ZNF200P98182 395 aaPredicted RBP6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 TARBP2Q15633 366 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms