RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 HSD17B4P51659 736 aa17.4■□□□□ 0.38
MKS1-210ENST00000581180 RPS6P62753 249 aaKnown RBP17.4■□□□□ 0.38
MKS1-210ENST00000581180 SLC30A10Q6XR72 485 aa17.4■□□□□ 0.38
MKS1-210ENST00000581180 RNF207Q6ZRF8 634 aa17.4■□□□□ 0.38
MKS1-210ENST00000581180 MCF2L2Q86YR7 1114 aa17.4■□□□□ 0.38
MKS1-210ENST00000581180 SAMD3Q8N6K7 520 aa17.4■□□□□ 0.38
MKS1-210ENST00000581180 NPLOC4Q8TAT6 608 aa17.4■□□□□ 0.38
MKS1-210ENST00000581180 DDX11Q96FC9 970 aa17.4■□□□□ 0.38
MKS1-210ENST00000581180 FGD4Q96M96 766 aa17.4■□□□□ 0.38
MKS1-210ENST00000581180 MAP3K20Q9NYL2 800 aaKnown RBP17.4■□□□□ 0.38
MKS1-210ENST00000581180 PTPN22Q9Y2R2 807 aa17.4■□□□□ 0.38
MKS1-210ENST00000581180 ESYT2A0FGR8 921 aa17.39■□□□□ 0.37
MKS1-210ENST00000581180 IGHA2P01877 340 aa17.39■□□□□ 0.37
MKS1-210ENST00000581180 CYP2B6P20813 491 aa17.39■□□□□ 0.37
MKS1-210ENST00000581180 NAPAP54920 295 aa17.39■□□□□ 0.37
MKS1-210ENST00000581180 CNTN2Q02246 1040 aa17.39■□□□□ 0.37
MKS1-210ENST00000581180 SYTL5Q8TDW5 730 aaPredicted RBP17.39■□□□□ 0.37
MKS1-210ENST00000581180 APBA2Q99767 749 aa17.39■□□□□ 0.37
MKS1-210ENST00000581180 SH3GLB2Q9NR46 395 aa17.39■□□□□ 0.37
MKS1-210ENST00000581180 VPS54Q9P1Q0 977 aa17.39■□□□□ 0.37
MKS1-210ENST00000581180 DIS3Q9Y2L1 958 aaKnown RBP17.39■□□□□ 0.37
MKS1-210ENST00000581180 MYH7BA7E2Y1 1941 aa17.39■□□□□ 0.37
MKS1-210ENST00000581180 POTEB2H3BUK9 544 aa17.38■□□□□ 0.37
MKS1-210ENST00000581180 PIK3CDO00329 1044 aa17.38■□□□□ 0.37
MKS1-210ENST00000581180 MEIS2O14770 477 aa17.38■□□□□ 0.37
MKS1-210ENST00000581180 CFBP00751 764 aa17.38■□□□□ 0.37
MKS1-210ENST00000581180 HMGN5P82970 282 aaKnown RBP17.38■□□□□ 0.37
MKS1-210ENST00000581180 DPP9Q86TI2 863 aa17.38■□□□□ 0.37
MKS1-210ENST00000581180 FAM177A1Q8N128 213 aaPredicted RBP17.38■□□□□ 0.37
MKS1-210ENST00000581180 PURBQ96QR8 312 aaKnown RBP17.38■□□□□ 0.37
MKS1-210ENST00000581180 ZMYND12Q9H0C1 365 aa17.38■□□□□ 0.37
MKS1-210ENST00000581180 PSTPIP2Q9H939 334 aa17.38■□□□□ 0.37
MKS1-210ENST00000581180 COL20A1Q9P218 1284 aa17.38■□□□□ 0.37
MKS1-210ENST00000581180 PTCH2Q9Y6C5 1203 aa17.38■□□□□ 0.37
MKS1-210ENST00000581180 ASTN1O14525 1302 aa17.38■□□□□ 0.37
MKS1-210ENST00000581180 LRRC37A2A6NM11 1700 aa17.38■□□□□ 0.37
MKS1-210ENST00000581180 KIAA1217Q5T5P2 1943 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 SOWAHBA6NEL2 793 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 SMCO2A6NFE2 343 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 GCOM1H8Y6P7 765 aaPredicted RBP17.37■□□□□ 0.37
MKS1-210ENST00000581180 POLR2MP0CAP2 368 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 CALML3P27482 149 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 PKN2Q16513 984 aaKnown RBP17.37■□□□□ 0.37
MKS1-210ENST00000581180 TEX2Q8IWB9 1127 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 HSCBQ8IWL3 235 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 RAET1EQ8TD07 263 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 PXYLP1Q8TE99 480 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 CCDC12Q8WUD4 166 aaPredicted RBP17.37■□□□□ 0.37
MKS1-210ENST00000581180 WASF1Q92558 559 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 MAML3Q96JK9 1138 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 ALG1Q9BT22 464 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 RIC8AQ9NPQ8 531 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 SLC5A4Q9NY91 659 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 FLRT1Q9NZU1 646 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 HTTP42858 3142 aa17.37■□□□□ 0.37
MKS1-210ENST00000581180 ADAMTS3O15072 1205 aa17.36■□□□□ 0.37
MKS1-210ENST00000581180 HOXA13P31271 388 aaPredicted RBP17.36■□□□□ 0.37
MKS1-210ENST00000581180 NPY5RQ15761 445 aa17.36■□□□□ 0.37
MKS1-210ENST00000581180 CCL14Q16627 93 aa17.36■□□□□ 0.37
MKS1-210ENST00000581180 FBXO46Q6PJ61 603 aaPredicted RBP17.36■□□□□ 0.37
MKS1-210ENST00000581180 USP17L6PQ6QN14 398 aa17.36■□□□□ 0.37
MKS1-210ENST00000581180 ZNF467Q7Z7K2 595 aaPredicted RBP17.36■□□□□ 0.37
MKS1-210ENST00000581180 CCDC148Q8NFR7 591 aa17.36■□□□□ 0.37
MKS1-210ENST00000581180 TRIB2Q92519 343 aa17.36■□□□□ 0.37
MKS1-210ENST00000581180 CUL5Q93034 780 aa17.36■□□□□ 0.37
MKS1-210ENST00000581180 ADCY3O60266 1144 aa17.35■□□□□ 0.37
MKS1-210ENST00000581180 CLK2P49760 499 aaKnown RBP17.35■□□□□ 0.37
MKS1-210ENST00000581180 ADCY7P51828 1080 aa17.35■□□□□ 0.37
MKS1-210ENST00000581180 MRPL12P52815 198 aaKnown RBP17.35■□□□□ 0.37
MKS1-210ENST00000581180 OLFML2BQ68BL8 750 aa17.35■□□□□ 0.37
MKS1-210ENST00000581180 MAMDC4Q6UXC1 1216 aa17.35■□□□□ 0.37
MKS1-210ENST00000581180 TAAR1Q96RJ0 339 aa17.35■□□□□ 0.37
MKS1-210ENST00000581180 GLT8D2Q9H1C3 349 aa17.35■□□□□ 0.37
MKS1-210ENST00000581180 GJB4Q9NTQ9 266 aa17.35■□□□□ 0.37
MKS1-210ENST00000581180 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.35■□□□□ 0.37
MKS1-210ENST00000581180 ELNP15502 786 aa17.34■□□□□ 0.37
MKS1-210ENST00000581180 GNA11P29992 359 aa17.34■□□□□ 0.37
MKS1-210ENST00000581180 ALDH5A1P51649 535 aaPredicted RBP17.34■□□□□ 0.37
MKS1-210ENST00000581180 FRMPD4Q14CM0 1322 aa17.34■□□□□ 0.37
MKS1-210ENST00000581180 UBE2SQ16763 222 aa17.34■□□□□ 0.37
MKS1-210ENST00000581180 TRMT44Q8IYL2 757 aaKnown RBP17.34■□□□□ 0.37
MKS1-210ENST00000581180 SLAIN1Q8ND83 568 aa17.34■□□□□ 0.37
MKS1-210ENST00000581180 DNERQ8NFT8 737 aa17.34■□□□□ 0.37
MKS1-210ENST00000581180 MORC4Q8TE76 937 aa17.34■□□□□ 0.37
MKS1-210ENST00000581180 INTS4Q96HW7 963 aaKnown RBP17.34■□□□□ 0.37
MKS1-210ENST00000581180 PHF20Q9BVI0 1012 aa17.34■□□□□ 0.37
MKS1-210ENST00000581180 C6orf50Q9HD87 102 aa17.34■□□□□ 0.37
MKS1-210ENST00000581180 ADD3Q9UEY8 706 aaKnown RBP17.34■□□□□ 0.37
MKS1-210ENST00000581180 LOC102724159A0A0B4J2E5 919 aa17.33■□□□□ 0.36
MKS1-210ENST00000581180 M0R2N6 131 aa17.33■□□□□ 0.36
MKS1-210ENST00000581180 GJB2P29033 226 aa17.33■□□□□ 0.36
MKS1-210ENST00000581180 GRK4P32298 578 aa17.33■□□□□ 0.36
MKS1-210ENST00000581180 NLRP5P59047 1200 aa17.33■□□□□ 0.36
MKS1-210ENST00000581180 PWP2Q15269 919 aaKnown RBP17.33■□□□□ 0.36
MKS1-210ENST00000581180 FCHSD1Q86WN1 690 aa17.33■□□□□ 0.36
MKS1-210ENST00000581180 MSL3Q8N5Y2 521 aaKnown RBP17.33■□□□□ 0.36
MKS1-210ENST00000581180 DAGLBQ8NCG7 672 aa17.33■□□□□ 0.36
MKS1-210ENST00000581180 TINF2Q9BSI4 451 aa17.33■□□□□ 0.36
MKS1-210ENST00000581180 KCNJ14Q9UNX9 436 aa17.33■□□□□ 0.36
MKS1-210ENST00000581180 SMC3Q9UQE7 1217 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms