RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 GIMAP6Q6P9H5 292 aa17.5■□□□□ 0.39
IFT20-211ENST00000580991 GJD3Q8N144 294 aa17.5■□□□□ 0.39
IFT20-211ENST00000580991 LRRC47Q8N1G4 583 aaKnown RBP17.5■□□□□ 0.39
IFT20-211ENST00000580991 CHURC1Q8WUH1 139 aa17.5■□□□□ 0.39
IFT20-211ENST00000580991 BCL11AQ9H165 835 aa17.5■□□□□ 0.39
IFT20-211ENST00000580991 GPHNQ9NQX3 736 aaPredicted RBP17.5■□□□□ 0.39
IFT20-211ENST00000580991 COL4A4P53420 1690 aaPredicted RBP17.49■□□□□ 0.39
IFT20-211ENST00000580991 ALAS1P13196 640 aa17.49■□□□□ 0.39
IFT20-211ENST00000580991 FAM47CQ5HY64 1035 aa17.49■□□□□ 0.39
IFT20-211ENST00000580991 FAM160B2Q86V87 743 aa17.49■□□□□ 0.39
IFT20-211ENST00000580991 FAM178BQ8IXR5 827 aa17.49■□□□□ 0.39
IFT20-211ENST00000580991 MORC4Q8TE76 937 aa17.49■□□□□ 0.39
IFT20-211ENST00000580991 STRBPQ96SI9 672 aaKnown RBP17.49■□□□□ 0.39
IFT20-211ENST00000580991 MTG1Q9BT17 334 aaPredicted RBP17.49■□□□□ 0.39
IFT20-211ENST00000580991 CYP39A1Q9NYL5 469 aa17.49■□□□□ 0.39
IFT20-211ENST00000580991 ISY1Q9ULR0 285 aaKnown RBP17.49■□□□□ 0.39
IFT20-211ENST00000580991 TANC1Q9C0D5 1861 aa17.49■□□□□ 0.39
IFT20-211ENST00000580991 SCN10AQ9Y5Y9 1956 aa17.49■□□□□ 0.39
IFT20-211ENST00000580991 GSG1L2A8MUP6 293 aa17.48■□□□□ 0.39
IFT20-211ENST00000580991 MYL3P08590 195 aa17.48■□□□□ 0.39
IFT20-211ENST00000580991 ALADP13716 330 aa17.48■□□□□ 0.39
IFT20-211ENST00000580991 KCNJ6P48051 423 aa17.48■□□□□ 0.39
IFT20-211ENST00000580991 IKQ13123 557 aaPredicted RBP17.48■□□□□ 0.39
IFT20-211ENST00000580991 BFSP2Q13515 415 aa17.48■□□□□ 0.39
IFT20-211ENST00000580991 NFRKBQ6P4R8 1299 aa17.48■□□□□ 0.39
IFT20-211ENST00000580991 SPRED2Q7Z698 418 aa17.48■□□□□ 0.39
IFT20-211ENST00000580991 STAG1Q8WVM7 1258 aa17.48■□□□□ 0.39
IFT20-211ENST00000580991 UIMC1Q96RL1 719 aa17.48■□□□□ 0.39
IFT20-211ENST00000580991 UBE2ZQ9H832 354 aaPredicted RBP17.48■□□□□ 0.39
IFT20-211ENST00000580991 WDFY4Q6ZS81 3184 aa17.48■□□□□ 0.39
IFT20-211ENST00000580991 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.47■□□□□ 0.39
IFT20-211ENST00000580991 CSPP1Q1MSJ5 1256 aa17.47■□□□□ 0.39
IFT20-211ENST00000580991 NBPF20Q3BBV1 942 aa17.47■□□□□ 0.39
IFT20-211ENST00000580991 LEXMQ3ZCV2 418 aa17.47■□□□□ 0.39
IFT20-211ENST00000580991 BRDTQ58F21 947 aaPredicted RBP17.47■□□□□ 0.39
IFT20-211ENST00000580991 GDPD5Q8WTR4 605 aa17.47■□□□□ 0.39
IFT20-211ENST00000580991 ZBED2Q9BTP6 218 aa17.47■□□□□ 0.39
IFT20-211ENST00000580991 WDR11Q9BZH6 1224 aa17.47■□□□□ 0.39
IFT20-211ENST00000580991 TRIP12Q14669 1992 aaPredicted RBP17.46■□□□□ 0.39
IFT20-211ENST00000580991 LCHNA4D1U4 455 aa17.46■□□□□ 0.39
IFT20-211ENST00000580991 PRDM1O75626 825 aa17.46■□□□□ 0.39
IFT20-211ENST00000580991 SSTR3P32745 418 aaPredicted RBP17.46■□□□□ 0.39
IFT20-211ENST00000580991 PTPN11Q06124 597 aaPredicted RBP17.46■□□□□ 0.39
IFT20-211ENST00000580991 LRRFIP1Q32MZ4 808 aaKnown RBP17.46■□□□□ 0.39
IFT20-211ENST00000580991 MUM1L1Q5H9M0 696 aa17.46■□□□□ 0.39
IFT20-211ENST00000580991 GMCL1Q96IK5 515 aa17.46■□□□□ 0.39
IFT20-211ENST00000580991 KCNH6Q9H252 994 aa17.46■□□□□ 0.39
IFT20-211ENST00000580991 ADD3Q9UEY8 706 aaKnown RBP17.46■□□□□ 0.39
IFT20-211ENST00000580991 NOD1Q9Y239 953 aa17.46■□□□□ 0.39
IFT20-211ENST00000580991 PTPRSQ13332 1948 aa17.46■□□□□ 0.39
IFT20-211ENST00000580991 LCTP09848 1927 aa17.45■□□□□ 0.38
IFT20-211ENST00000580991 LOC102724159A0A0B4J2E5 919 aa17.45■□□□□ 0.38
IFT20-211ENST00000580991 PLA2G6O60733 806 aa17.45■□□□□ 0.38
IFT20-211ENST00000580991 RAB11FIP3O75154 756 aa17.45■□□□□ 0.38
IFT20-211ENST00000580991 HMMRO75330 724 aa17.45■□□□□ 0.38
IFT20-211ENST00000580991 SLC1A4P43007 532 aa17.45■□□□□ 0.38
IFT20-211ENST00000580991 WDR5P61964 334 aaKnown RBP17.45■□□□□ 0.38
IFT20-211ENST00000580991 PWP2Q15269 919 aaKnown RBP17.45■□□□□ 0.38
IFT20-211ENST00000580991 NSMFQ6X4W1 530 aa17.45■□□□□ 0.38
IFT20-211ENST00000580991 OR6J1Q8NGC5 347 aa17.45■□□□□ 0.38
IFT20-211ENST00000580991 SUGCTQ9HAC7 445 aa17.45■□□□□ 0.38
IFT20-211ENST00000580991 RAD50Q92878 1312 aa17.45■□□□□ 0.38
IFT20-211ENST00000580991 PLIN4Q96Q06 1357 aa17.44■□□□□ 0.38
IFT20-211ENST00000580991 RBM47A0AV96 593 aaKnown RBP17.44■□□□□ 0.38
IFT20-211ENST00000580991 KPNA6O60684 536 aa17.44■□□□□ 0.38
IFT20-211ENST00000580991 TSPY3P0CV98 308 aa17.44■□□□□ 0.38
IFT20-211ENST00000580991 TSPY8P0CW00 308 aa17.44■□□□□ 0.38
IFT20-211ENST00000580991 KCNA5P22460 613 aa17.44■□□□□ 0.38
IFT20-211ENST00000580991 TDO2P48775 406 aa17.44■□□□□ 0.38
IFT20-211ENST00000580991 NHLH1Q02575 133 aa17.44■□□□□ 0.38
IFT20-211ENST00000580991 NEDD1Q8NHV4 660 aa17.44■□□□□ 0.38
IFT20-211ENST00000580991 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.44■□□□□ 0.38
IFT20-211ENST00000580991 PURBQ96QR8 312 aaKnown RBP17.44■□□□□ 0.38
IFT20-211ENST00000580991 MTUS1Q9ULD2 1270 aa17.44■□□□□ 0.38
IFT20-211ENST00000580991 MCCP23508 829 aa17.43■□□□□ 0.38
IFT20-211ENST00000580991 ERVK-21P61565 698 aa17.43■□□□□ 0.38
IFT20-211ENST00000580991 PTCRAQ6ISU1 281 aaPredicted RBP17.43■□□□□ 0.38
IFT20-211ENST00000580991 CCDC155Q8N6L0 562 aa17.43■□□□□ 0.38
IFT20-211ENST00000580991 CAGE1Q8TC20 777 aa17.43■□□□□ 0.38
IFT20-211ENST00000580991 SNX27Q96L92 541 aa17.43■□□□□ 0.38
IFT20-211ENST00000580991 TGS1Q96RS0 853 aaKnown RBP17.43■□□□□ 0.38
IFT20-211ENST00000580991 RAD9AQ99638 391 aa17.43■□□□□ 0.38
IFT20-211ENST00000580991 CCPG1Q9ULG6 757 aa17.43■□□□□ 0.38
IFT20-211ENST00000580991 A6NJR5 290 aa17.42■□□□□ 0.38
IFT20-211ENST00000580991 NKRFO15226 690 aaKnown RBP eCLIP17.42■□□□□ 0.38
IFT20-211ENST00000580991 GJB5O95377 273 aa17.42■□□□□ 0.38
IFT20-211ENST00000580991 IL9P15248 144 aa17.42■□□□□ 0.38
IFT20-211ENST00000580991 GNAT2P19087 354 aa17.42■□□□□ 0.38
IFT20-211ENST00000580991 ALDH5A1P51649 535 aaPredicted RBP17.42■□□□□ 0.38
IFT20-211ENST00000580991 PUS10Q3MIT2 529 aaKnown RBP17.42■□□□□ 0.38
IFT20-211ENST00000580991 TMCO2Q7Z6W1 182 aaPredicted RBP17.42■□□□□ 0.38
IFT20-211ENST00000580991 AFAP1L1Q8TED9 768 aa17.42■□□□□ 0.38
IFT20-211ENST00000580991 PPP1R13LQ8WUF5 828 aa17.42■□□□□ 0.38
IFT20-211ENST00000580991 EPB41L4AQ9HCS5 686 aaPredicted RBP17.42■□□□□ 0.38
IFT20-211ENST00000580991 PRR12Q9ULL5 1215 aa17.42■□□□□ 0.38
IFT20-211ENST00000580991 ZNF318Q5VUA4 2279 aa17.42■□□□□ 0.38
IFT20-211ENST00000580991 TRIOO75962 3097 aa17.41■□□□□ 0.38
IFT20-211ENST00000580991 GRXCR2A6NFK2 248 aa17.41■□□□□ 0.38
IFT20-211ENST00000580991 DCXO43602 365 aa17.41■□□□□ 0.38
IFT20-211ENST00000580991 PARNO95453 639 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms