RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 SMC3Q9UQE7 1217 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 DAGLAQ9Y4D2 1042 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 MYH7P12883 1935 aa7.32□□□□□ -1.24
PTPRM-213ENST00000580949 YDJCA8MPS7 323 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 F8W031 263 aaPredicted RBP7.31□□□□□ -1.24
PTPRM-213ENST00000580949 PRDM1O75626 825 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 BAG4O95429 457 aaKnown RBP7.31□□□□□ -1.24
PTPRM-213ENST00000580949 BCRP11274 1271 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 NPR3P17342 541 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 ADH6P28332 368 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 BTDP43251 543 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 CCT2P78371 535 aaKnown RBP7.31□□□□□ -1.24
PTPRM-213ENST00000580949 FGD1P98174 961 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 KIAA2012Q0VF49 1180 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 TRDNQ13061 729 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 SBK1Q52WX2 424 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 RRP12Q5JTH9 1297 aaKnown RBP7.31□□□□□ -1.24
PTPRM-213ENST00000580949 DACT2Q5SW24 774 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 SLCO4C1Q6ZQN7 724 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 PODNQ7Z5L7 613 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 RAB11FIP4Q86YS3 637 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 SVOPQ8N4V2 548 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 TGFBRAP1Q8WUH2 860 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 KRT23Q9C075 422 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 LY9Q9HBG7 655 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.31□□□□□ -1.24
PTPRM-213ENST00000580949 SUGT1Q9Y2Z0 365 aa7.31□□□□□ -1.24
PTPRM-213ENST00000580949 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.31□□□□□ -1.24
PTPRM-213ENST00000580949 KLF18A0A0U1RQI7 1052 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 ZBTB39O15060 712 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 OIP5O43482 229 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 ORC4O43929 436 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 SIN3BO75182 1162 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 BAG3O95817 575 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 PLCD1P51178 756 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 TGFB2P61812 414 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 CCINQ13939 588 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 SEC23AQ15436 765 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 SLC4A8Q2Y0W8 1093 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 CCDC93Q567U6 631 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 NOM1Q5C9Z4 860 aaKnown RBP7.3□□□□□ -1.24
PTPRM-213ENST00000580949 TMEM67Q5HYA8 995 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 C12orf60Q5U649 245 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 STRIP1Q5VSL9 837 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 APOBEC3HQ6NTF7 200 aaKnown RBP7.3□□□□□ -1.24
PTPRM-213ENST00000580949 MAPKAPK5Q8IW41 473 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 TEX11Q8IYF3 940 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 RTKN2Q8IZC4 609 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 NSUN7Q8NE18 718 aaKnown RBP7.3□□□□□ -1.24
PTPRM-213ENST00000580949 SMARCC2Q8TAQ2 1214 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 DDX11Q96FC9 970 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 DYNLL2Q96FJ2 89 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 TMEM87BQ96K49 555 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 ZKSCAN3Q9BRR0 538 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 GSX2Q9BZM3 304 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 CNNM2Q9H8M5 875 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 ZNF277Q9NRM2 450 aaPredicted RBP7.3□□□□□ -1.24
PTPRM-213ENST00000580949 MCM9Q9NXL9 1143 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 PIM2Q9P1W9 311 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 SAP30BPQ9UHR5 308 aaKnown RBP7.3□□□□□ -1.24
PTPRM-213ENST00000580949 KLF15Q9UIH9 416 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 ANGEL1Q9UNK9 670 aaKnown RBP7.3□□□□□ -1.24
PTPRM-213ENST00000580949 TTF2Q9UNY4 1162 aaKnown RBP7.3□□□□□ -1.24
PTPRM-213ENST00000580949 MTMR6Q9Y217 621 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 PCDHAC2Q9Y5I4 1007 aa7.3□□□□□ -1.24
PTPRM-213ENST00000580949 CHD4Q14839 1912 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 IFIT3O14879 490 aaKnown RBP7.29□□□□□ -1.24
PTPRM-213ENST00000580949 PPIP5K2O43314 1243 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 STX6O43752 255 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 FAM13AO94988 1023 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 ARHGEF15O94989 841 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 ABL1P00519 1130 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 EGFRP00533 1210 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 ZSCAN22P10073 491 aaPredicted RBP7.29□□□□□ -1.24
PTPRM-213ENST00000580949 FDPSP14324 419 aaKnown RBP7.29□□□□□ -1.24
PTPRM-213ENST00000580949 MPSTP25325 297 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 POLD1P28340 1107 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 LIFRP42702 1097 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 USP5P45974 858 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 SERPINB4P48594 390 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 FKBP1AP62942 108 aaKnown RBP7.29□□□□□ -1.24
PTPRM-213ENST00000580949 MAP3K10Q02779 954 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 MTMR3Q13615 1198 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 ALKBH2Q6NS38 261 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 CDC42EP5Q6NZY7 148 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 HHIPL2Q6UWX4 724 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 SYT9Q86SS6 491 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 SGMS1Q86VZ5 419 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 RGL4Q8IZJ4 473 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 SUPT20HQ8NEM7 779 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 PIK3R5Q8WYR1 880 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 PSMD1Q99460 953 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 LLPHQ9BRT6 129 aaKnown RBP7.29□□□□□ -1.24
PTPRM-213ENST00000580949 MRIQ9BWK5 157 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 RNF41Q9H4P4 317 aaPredicted RBP7.29□□□□□ -1.24
PTPRM-213ENST00000580949 TOMM22Q9NS69 142 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 STK17AQ9UEE5 414 aa7.29□□□□□ -1.24
PTPRM-213ENST00000580949 NAP1L2Q9ULW6 460 aaPredicted RBP7.29□□□□□ -1.24
PTPRM-213ENST00000580949 GNEQ9Y223 722 aaKnown RBP7.29□□□□□ -1.24
PTPRM-213ENST00000580949 COL4A5P29400 1685 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms