RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 SLFNL1Q499Z3 407 aa12.81□□□□□ -0.36
TOP3A-210ENST00000580713 FAM47CQ5HY64 1035 aa12.81□□□□□ -0.36
TOP3A-210ENST00000580713 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.81□□□□□ -0.36
TOP3A-210ENST00000580713 EEPD1Q7L9B9 569 aa12.81□□□□□ -0.36
TOP3A-210ENST00000580713 ERC1Q8IUD2 1116 aa12.81□□□□□ -0.36
TOP3A-210ENST00000580713 STK11IPQ8N1F8 1099 aa12.81□□□□□ -0.36
TOP3A-210ENST00000580713 RETREG2Q8NC44 543 aa12.81□□□□□ -0.36
TOP3A-210ENST00000580713 GDPD5Q8WTR4 605 aa12.81□□□□□ -0.36
TOP3A-210ENST00000580713 SLC38A10Q9HBR0 1119 aa12.81□□□□□ -0.36
TOP3A-210ENST00000580713 IL1RAPL2Q9NP60 686 aa12.81□□□□□ -0.36
TOP3A-210ENST00000580713 ZBTB40Q9NUA8 1239 aa12.81□□□□□ -0.36
TOP3A-210ENST00000580713 CLIP2Q9UDT6 1046 aa12.81□□□□□ -0.36
TOP3A-210ENST00000580713 PCDHB8Q9UN66 801 aa12.81□□□□□ -0.36
TOP3A-210ENST00000580713 EXOC6BQ9Y2D4 811 aa12.81□□□□□ -0.36
TOP3A-210ENST00000580713 STK24Q9Y6E0 443 aa12.81□□□□□ -0.36
TOP3A-210ENST00000580713 TNKSO95271 1327 aa12.81□□□□□ -0.36
TOP3A-210ENST00000580713 TTLL13PA6NNM8 815 aa12.8□□□□□ -0.36
TOP3A-210ENST00000580713 ALADP13716 330 aa12.8□□□□□ -0.36
TOP3A-210ENST00000580713 KCNJ6P48051 423 aa12.8□□□□□ -0.36
TOP3A-210ENST00000580713 NHLH1Q02575 133 aa12.8□□□□□ -0.36
TOP3A-210ENST00000580713 IQSEC1Q6DN90 963 aa12.8□□□□□ -0.36
TOP3A-210ENST00000580713 B4GALNT3Q6L9W6 998 aa12.8□□□□□ -0.36
TOP3A-210ENST00000580713 SPRED2Q7Z698 418 aa12.8□□□□□ -0.36
TOP3A-210ENST00000580713 FAM178BQ8IXR5 827 aa12.8□□□□□ -0.36
TOP3A-210ENST00000580713 ZBED2Q9BTP6 218 aa12.8□□□□□ -0.36
TOP3A-210ENST00000580713 UBE2ZQ9H832 354 aaPredicted RBP12.8□□□□□ -0.36
TOP3A-210ENST00000580713 ACAD9Q9H845 621 aa12.8□□□□□ -0.36
TOP3A-210ENST00000580713 MKNK2Q9HBH9 465 aa12.8□□□□□ -0.36
TOP3A-210ENST00000580713 PDGFCQ9NRA1 345 aa12.8□□□□□ -0.36
TOP3A-210ENST00000580713 NYAP2Q9P242 653 aa12.8□□□□□ -0.36
TOP3A-210ENST00000580713 FEM1BQ9UK73 627 aa12.8□□□□□ -0.36
TOP3A-210ENST00000580713 SLC4A4Q9Y6R1 1079 aa12.8□□□□□ -0.36
TOP3A-210ENST00000580713 DDX49Q9Y6V7 483 aaKnown RBP12.8□□□□□ -0.36
TOP3A-210ENST00000580713 SOWAHBA6NEL2 793 aa12.79□□□□□ -0.36
TOP3A-210ENST00000580713 MYL3P08590 195 aa12.79□□□□□ -0.36
TOP3A-210ENST00000580713 RFC2P35250 354 aa12.79□□□□□ -0.36
TOP3A-210ENST00000580713 TIE1P35590 1138 aa12.79□□□□□ -0.36
TOP3A-210ENST00000580713 OAZ1P54368 228 aa12.79□□□□□ -0.36
TOP3A-210ENST00000580713 CTR9Q6PD62 1173 aa12.79□□□□□ -0.36
TOP3A-210ENST00000580713 KIAA1211Q6ZU35 1233 aa12.79□□□□□ -0.36
TOP3A-210ENST00000580713 FBXO16Q8IX29 292 aaPredicted RBP12.79□□□□□ -0.36
TOP3A-210ENST00000580713 FAM133AQ8N9E0 248 aa12.79□□□□□ -0.36
TOP3A-210ENST00000580713 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.79□□□□□ -0.36
TOP3A-210ENST00000580713 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
TOP3A-210ENST00000580713 POLR3EQ9NVU0 708 aa12.79□□□□□ -0.36
TOP3A-210ENST00000580713 LMCD1Q9NZU5 365 aa12.79□□□□□ -0.36
TOP3A-210ENST00000580713 MTUS1Q9ULD2 1270 aa12.79□□□□□ -0.36
TOP3A-210ENST00000580713 Q9Y3F1 56 aa12.79□□□□□ -0.36
TOP3A-210ENST00000580713 BAZ2AQ9UIF9 1905 aaKnown RBP12.79□□□□□ -0.36
TOP3A-210ENST00000580713 BRWD1Q9NSI6 2320 aa12.79□□□□□ -0.36
TOP3A-210ENST00000580713 LPXNO60711 386 aa12.78□□□□□ -0.36
TOP3A-210ENST00000580713 KCNA5P22460 613 aa12.78□□□□□ -0.36
TOP3A-210ENST00000580713 ADD2P35612 726 aa12.78□□□□□ -0.36
TOP3A-210ENST00000580713 IKQ13123 557 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-210ENST00000580713 TMEM63BQ5T3F8 832 aa12.78□□□□□ -0.36
TOP3A-210ENST00000580713 FBXL18Q96ME1 805 aa12.78□□□□□ -0.36
TOP3A-210ENST00000580713 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.78□□□□□ -0.36
TOP3A-210ENST00000580713 A1CFQ9NQ94 594 aaKnown RBP12.78□□□□□ -0.36
TOP3A-210ENST00000580713 RNF146Q9NTX7 359 aa12.78□□□□□ -0.36
TOP3A-210ENST00000580713 ZNF536O15090 1300 aa12.78□□□□□ -0.36
TOP3A-210ENST00000580713 LCHNA4D1U4 455 aa12.77□□□□□ -0.37
TOP3A-210ENST00000580713 IFIT2P09913 472 aaKnown RBP12.77□□□□□ -0.37
TOP3A-210ENST00000580713 IQCF3P0C7M6 154 aa12.77□□□□□ -0.37
TOP3A-210ENST00000580713 ALAS1P13196 640 aa12.77□□□□□ -0.37
TOP3A-210ENST00000580713 RASA1P20936 1047 aa12.77□□□□□ -0.37
TOP3A-210ENST00000580713 LEXMQ3ZCV2 418 aa12.77□□□□□ -0.37
TOP3A-210ENST00000580713 PTCRAQ6ISU1 281 aaPredicted RBP12.77□□□□□ -0.37
TOP3A-210ENST00000580713 TAPT1Q6NXT6 567 aa12.77□□□□□ -0.37
TOP3A-210ENST00000580713 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.77□□□□□ -0.37
TOP3A-210ENST00000580713 PPP1R13LQ8WUF5 828 aa12.77□□□□□ -0.37
TOP3A-210ENST00000580713 PAG1Q9NWQ8 432 aa12.77□□□□□ -0.37
TOP3A-210ENST00000580713 NOD1Q9Y239 953 aa12.77□□□□□ -0.37
TOP3A-210ENST00000580713 PCDHB15Q9Y5E8 787 aa12.77□□□□□ -0.37
TOP3A-210ENST00000580713 SCN5AQ14524 2016 aa12.77□□□□□ -0.37
TOP3A-210ENST00000580713 MINDY4BA8MYZ0 360 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 TMEM232C9JQI7 657 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 BAIAP3O94812 1187 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 FDX1P10109 184 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 BMP3P12645 472 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 IL9P15248 144 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 PSEN1P49768 467 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 CHMP4BP1P59074 171 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 BFSP2Q13515 415 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 NBPF20Q3BBV1 942 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 HSP90AB4PQ58FF6 505 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 TMCO2Q7Z6W1 182 aaPredicted RBP12.76□□□□□ -0.37
TOP3A-210ENST00000580713 LRRC47Q8N1G4 583 aaKnown RBP12.76□□□□□ -0.37
TOP3A-210ENST00000580713 CLASRPQ8N2M8 674 aaKnown RBP12.76□□□□□ -0.37
TOP3A-210ENST00000580713 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.76□□□□□ -0.37
TOP3A-210ENST00000580713 RHPN1Q8TCX5 695 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 CHMP4CQ96CF2 233 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 TRERF1Q96PN7 1200 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 MTG1Q9BT17 334 aaPredicted RBP12.76□□□□□ -0.37
TOP3A-210ENST00000580713 KCNH6Q9H252 994 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 BOLA2Q9H3K6 86 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 VTA1Q9NP79 307 aa12.76□□□□□ -0.37
TOP3A-210ENST00000580713 ARPP21Q9UBL0 812 aaPredicted RBP12.76□□□□□ -0.37
TOP3A-210ENST00000580713 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.75□□□□□ -0.37
TOP3A-210ENST00000580713 DCXO43602 365 aa12.75□□□□□ -0.37
TOP3A-210ENST00000580713 CPT1AP50416 773 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms