RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 AFMP43652 599 aa16.79■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PLCB2Q00722 1185 aa16.79■□□□□ 0.28
CDK5RAP3-218ENST00000580391 SPP2Q13103 211 aa16.79■□□□□ 0.28
CDK5RAP3-218ENST00000580391 SH3RF1Q7Z6J0 888 aa16.79■□□□□ 0.28
CDK5RAP3-218ENST00000580391 MTMR9Q96QG7 549 aa16.79■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PICK1Q9NRD5 415 aa16.79■□□□□ 0.28
CDK5RAP3-218ENST00000580391 EMILIN3Q9NT22 766 aa16.79■□□□□ 0.28
CDK5RAP3-218ENST00000580391 HOXA13P31271 388 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PPP4R3AQ6IN85 833 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 KANK3Q6NY19 840 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PDXDC2PQ6P474 469 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 DHX40Q8IX18 779 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 SLF1Q9BQI6 1058 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 WDR18Q9BV38 432 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 TANGO6Q9C0B7 1094 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 DDX25Q9UHL0 483 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 SCN4AP35499 1836 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 ADCY5O95622 1261 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 TECP42680 631 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 TXKP42681 527 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 AOPEPQ8N6M6 819 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 IQUBQ8NA54 791 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 STAMQ92783 540 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PAGE5Q96GU1 130 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 DISC1Q9NRI5 854 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 MAN1B1Q9UKM7 699 aa16.78■□□□□ 0.28
CDK5RAP3-218ENST00000580391 ZNF536O15090 1300 aa16.77■□□□□ 0.28
CDK5RAP3-218ENST00000580391 SUPT20HL1Q3ZLR7 823 aa16.77■□□□□ 0.28
CDK5RAP3-218ENST00000580391 LDHDQ86WU2 507 aa16.77■□□□□ 0.28
CDK5RAP3-218ENST00000580391 ZNF280CQ8ND82 737 aa16.77■□□□□ 0.28
CDK5RAP3-218ENST00000580391 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.77■□□□□ 0.28
CDK5RAP3-218ENST00000580391 CRYGNQ8WXF5 182 aa16.77■□□□□ 0.28
CDK5RAP3-218ENST00000580391 TBC1D5Q92609 795 aa16.77■□□□□ 0.28
CDK5RAP3-218ENST00000580391 SMARCE1Q969G3 411 aa16.77■□□□□ 0.28
CDK5RAP3-218ENST00000580391 DCPSQ96C86 337 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP3-218ENST00000580391 CCSER1Q9C0I3 900 aa16.77■□□□□ 0.28
CDK5RAP3-218ENST00000580391 AS3MTQ9HBK9 375 aa16.77■□□□□ 0.28
CDK5RAP3-218ENST00000580391 SPDYE3A6NKU9 549 aa16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 GCFC2P16383 781 aaKnown RBP16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 BMP6P22004 513 aa16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 UBA7P41226 1012 aa16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 STAT6P42226 847 aa16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 USP14P54578 494 aa16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 BACE1P56817 501 aa16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 ARHGAP4P98171 946 aa16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 GPR162Q16538 588 aa16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 NT5DC1Q5TFE4 455 aa16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 IGSF22Q8N9C0 903 aa16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 LRRC15Q8TF66 581 aa16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 L3MBTL3Q96JM7 780 aaPredicted RBP16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 AK8Q96MA6 479 aa16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 PYM1Q9BRP8 204 aaKnown RBP16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 RPAP3Q9H6T3 665 aaPredicted RBP16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 ZHX2Q9Y6X8 837 aa16.77■□□□□ 0.27
CDK5RAP3-218ENST00000580391 PIK3CDO00329 1044 aa16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 USP2O75604 605 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 FLOT1O75955 427 aa16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 CFBP00751 764 aa16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 SARSP49591 514 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 TRAF1Q13077 416 aa16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 NAALADL2Q58DX5 795 aa16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 NOL9Q5SY16 702 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 CABP7Q86V35 215 aa16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 SULF1Q8IWU6 871 aa16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 PRPF38AQ8NAV1 312 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 RASSF8Q8NHQ8 419 aa16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 SPATA20Q8TB22 786 aa16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 GJA10Q969M2 543 aa16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 AGBL1Q96MI9 1066 aa16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 PLIN2Q99541 437 aa16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 MTRQ99707 1265 aa16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 NAT10Q9H0A0 1025 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-218ENST00000580391 ABCB11O95342 1321 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 POTEMA6NI47 508 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 BECN2A8MW95 431 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 FOSP01100 380 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 ICAM1P05362 532 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 SREBF1P36956 1147 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 FXR2P51116 673 aaKnown RBP eCLIP16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 DPY19L2Q6NUT2 758 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 FCHSD1Q86WN1 690 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 HAS1Q92839 578 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 CCDC34Q96HJ3 373 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 MMTAG2Q9BU76 263 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 CCPG1Q9ULG6 757 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 GOLGA6L19H0YKK7 550 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 USP11P51784 963 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 HMGCS2P54868 508 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 DPYDQ12882 1025 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 TMEM266Q2M3C6 531 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 MCTP2Q6DN12 878 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 UIMC1Q96RL1 719 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 NAP1L4Q99733 375 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 BPIFA3Q9BQP9 254 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 BLZF1Q9H2G9 400 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 PPP1R9AQ9ULJ8 1098 aa16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 MRPL11Q9Y3B7 192 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-218ENST00000580391 PLCG1P19174 1290 aa16.74■□□□□ 0.27
CDK5RAP3-218ENST00000580391 VGLL4Q14135 290 aa16.74■□□□□ 0.27
CDK5RAP3-218ENST00000580391 MORC3Q14149 939 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms