RNA–Protein interactions for RNA: ENST00000580238.5

ATG13-226, Transcript of autophagy related 13, humanhuman

TSL 4

Gene ATG13, Length 624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-226ENST00000580238 SNAI1O95863 264 aaPredicted RBP19.5■□□□□ 0.71
ATG13-226ENST00000580238 CYBAP13498 195 aa19.5■□□□□ 0.71
ATG13-226ENST00000580238 CALML3P27482 149 aa19.5■□□□□ 0.71
ATG13-226ENST00000580238 CCND3P30281 292 aaPredicted RBP19.5■□□□□ 0.71
ATG13-226ENST00000580238 SOX10P56693 466 aa19.5■□□□□ 0.71
ATG13-226ENST00000580238 PRAMEF19Q5SWL8 479 aa19.5■□□□□ 0.71
ATG13-226ENST00000580238 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.5■□□□□ 0.71
ATG13-226ENST00000580238 RNF208Q9H0X6 261 aa19.5■□□□□ 0.71
ATG13-226ENST00000580238 COL20A1Q9P218 1284 aa19.5■□□□□ 0.71
ATG13-226ENST00000580238 LRRC37A2A6NM11 1700 aa19.49■□□□□ 0.71
ATG13-226ENST00000580238 CCDC196A0A1B0GTZ2 297 aa19.49■□□□□ 0.71
ATG13-226ENST00000580238 MSL3Q8N5Y2 521 aaKnown RBP19.49■□□□□ 0.71
ATG13-226ENST00000580238 SYTL5Q8TDW5 730 aaPredicted RBP19.49■□□□□ 0.71
ATG13-226ENST00000580238 TBC1D32Q96NH3 1257 aa19.49■□□□□ 0.71
ATG13-226ENST00000580238 MAF1Q9H063 256 aa19.49■□□□□ 0.71
ATG13-226ENST00000580238 HMX1Q9NP08 348 aaPredicted RBP19.49■□□□□ 0.71
ATG13-226ENST00000580238 SEC63Q9UGP8 760 aaKnown RBP19.49■□□□□ 0.71
ATG13-226ENST00000580238 V9GY48 417 aaPredicted RBP19.49■□□□□ 0.71
ATG13-226ENST00000580238 SYNGAP1Q96PV0 1343 aa19.49■□□□□ 0.71
ATG13-226ENST00000580238 CAPN15O75808 1086 aa19.48■□□□□ 0.71
ATG13-226ENST00000580238 LARGE1O95461 756 aa19.48■□□□□ 0.71
ATG13-226ENST00000580238 GJB1P08034 283 aa19.48■□□□□ 0.71
ATG13-226ENST00000580238 HSD17B4P51659 736 aa19.48■□□□□ 0.71
ATG13-226ENST00000580238 TRAF1Q13077 416 aa19.48■□□□□ 0.71
ATG13-226ENST00000580238 STK3Q13188 491 aa19.48■□□□□ 0.71
ATG13-226ENST00000580238 MCF2L2Q86YR7 1114 aa19.48■□□□□ 0.71
ATG13-226ENST00000580238 KATNBL1Q9H079 304 aa19.48■□□□□ 0.71
ATG13-226ENST00000580238 MKI67P46013 3256 aaKnown RBP19.48■□□□□ 0.71
ATG13-226ENST00000580238 FRMPD3Q5JV73 1810 aa19.47■□□□□ 0.71
ATG13-226ENST00000580238 PPFIA3O75145 1194 aa19.47■□□□□ 0.71
ATG13-226ENST00000580238 CFBP00751 764 aa19.47■□□□□ 0.71
ATG13-226ENST00000580238 ZNF865P0CJ78 1059 aaPredicted RBP19.47■□□□□ 0.71
ATG13-226ENST00000580238 IFNAR1P17181 557 aa19.47■□□□□ 0.71
ATG13-226ENST00000580238 ALDH5A1P51649 535 aaPredicted RBP19.47■□□□□ 0.71
ATG13-226ENST00000580238 SCRN1Q12765 414 aa19.47■□□□□ 0.71
ATG13-226ENST00000580238 ANKRD1Q15327 319 aa19.47■□□□□ 0.71
ATG13-226ENST00000580238 WWC2Q6AWC2 1192 aa19.47■□□□□ 0.71
ATG13-226ENST00000580238 TYW1BQ6NUM6 668 aa19.47■□□□□ 0.71
ATG13-226ENST00000580238 ARMCX2Q7L311 632 aa19.47■□□□□ 0.71
ATG13-226ENST00000580238 MORC4Q8TE76 937 aa19.47■□□□□ 0.71
ATG13-226ENST00000580238 GPKOWQ92917 476 aaPredicted RBP eCLIP19.47■□□□□ 0.71
ATG13-226ENST00000580238 PHKBQ93100 1093 aa19.47■□□□□ 0.71
ATG13-226ENST00000580238 SHISA4Q96DD7 197 aa19.47■□□□□ 0.71
ATG13-226ENST00000580238 DEFB118Q96PH6 123 aa19.47■□□□□ 0.71
ATG13-226ENST00000580238 TMEM106CQ9BVX2 250 aa19.47■□□□□ 0.71
ATG13-226ENST00000580238 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.47■□□□□ 0.71
ATG13-226ENST00000580238 PFKFB2O60825 505 aa19.46■□□□□ 0.71
ATG13-226ENST00000580238 PKN1Q16512 942 aa19.46■□□□□ 0.71
ATG13-226ENST00000580238 ME3Q16798 604 aa19.46■□□□□ 0.71
ATG13-226ENST00000580238 NOL8Q76FK4 1167 aaKnown RBP19.46■□□□□ 0.71
ATG13-226ENST00000580238 TAAR1Q96RJ0 339 aa19.46■□□□□ 0.71
ATG13-226ENST00000580238 UPF2Q9HAU5 1272 aaKnown RBP19.46■□□□□ 0.71
ATG13-226ENST00000580238 NRBP1Q9UHY1 535 aa19.46■□□□□ 0.71
ATG13-226ENST00000580238 PRPF3O43395 683 aaKnown RBP19.45■□□□□ 0.7
ATG13-226ENST00000580238 EN2P19622 333 aaPredicted RBP19.45■□□□□ 0.7
ATG13-226ENST00000580238 HOXA13P31271 388 aaPredicted RBP19.45■□□□□ 0.7
ATG13-226ENST00000580238 GJA8P48165 433 aa19.45■□□□□ 0.7
ATG13-226ENST00000580238 LHX8Q68G74 356 aa19.45■□□□□ 0.7
ATG13-226ENST00000580238 HEATR3Q7Z4Q2 680 aa19.45■□□□□ 0.7
ATG13-226ENST00000580238 U2AF1L4Q8WU68 220 aaKnown RBP19.45■□□□□ 0.7
ATG13-226ENST00000580238 CRISPLD2Q9H0B8 497 aa19.45■□□□□ 0.7
ATG13-226ENST00000580238 ADD3Q9UEY8 706 aaKnown RBP19.45■□□□□ 0.7
ATG13-226ENST00000580238 ASB14A6NK59 587 aa19.44■□□□□ 0.7
ATG13-226ENST00000580238 STXBP3O00186 592 aa19.44■□□□□ 0.7
ATG13-226ENST00000580238 SGPL1O95470 568 aa19.44■□□□□ 0.7
ATG13-226ENST00000580238 EDNRBP24530 442 aa19.44■□□□□ 0.7
ATG13-226ENST00000580238 PFKFB3Q16875 520 aaPredicted RBP19.44■□□□□ 0.7
ATG13-226ENST00000580238 DNERQ8NFT8 737 aa19.44■□□□□ 0.7
ATG13-226ENST00000580238 RNF26Q9BY78 433 aaPredicted RBP19.44■□□□□ 0.7
ATG13-226ENST00000580238 MAP3K20Q9NYL2 800 aaKnown RBP19.44■□□□□ 0.7
ATG13-226ENST00000580238 LOC102724159A0A0B4J2E5 919 aa19.43■□□□□ 0.7
ATG13-226ENST00000580238 GCOM1H8Y6P7 765 aaPredicted RBP19.43■□□□□ 0.7
ATG13-226ENST00000580238 MEIS2O14770 477 aa19.43■□□□□ 0.7
ATG13-226ENST00000580238 SEPT4O43236 478 aa19.43■□□□□ 0.7
ATG13-226ENST00000580238 POLR2MP0CAP2 368 aa19.43■□□□□ 0.7
ATG13-226ENST00000580238 ST3GAL1Q11201 340 aa19.43■□□□□ 0.7
ATG13-226ENST00000580238 ACVR2BQ13705 512 aa19.43■□□□□ 0.7
ATG13-226ENST00000580238 PWP2Q15269 919 aaKnown RBP19.43■□□□□ 0.7
ATG13-226ENST00000580238 RABEP1Q15276 862 aa19.43■□□□□ 0.7
ATG13-226ENST00000580238 IFFO2Q5TF58 517 aa19.43■□□□□ 0.7
ATG13-226ENST00000580238 SAMD3Q8N6K7 520 aa19.43■□□□□ 0.7
ATG13-226ENST00000580238 NECAB1Q8N987 351 aa19.43■□□□□ 0.7
ATG13-226ENST00000580238 SLC26A6Q9BXS9 759 aa19.43■□□□□ 0.7
ATG13-226ENST00000580238 SLKQ9H2G2 1235 aaPredicted RBP19.43■□□□□ 0.7
ATG13-226ENST00000580238 ABHD16BQ9H3Z7 469 aa19.43■□□□□ 0.7
ATG13-226ENST00000580238 BARHL2Q9NY43 387 aa19.43■□□□□ 0.7
ATG13-226ENST00000580238 DDX20Q9UHI6 824 aaKnown RBP19.43■□□□□ 0.7
ATG13-226ENST00000580238 CNPY2Q9Y2B0 182 aa19.43■□□□□ 0.7
ATG13-226ENST00000580238 PIK3CDO00329 1044 aa19.42■□□□□ 0.7
ATG13-226ENST00000580238 ADCY6O43306 1168 aa19.42■□□□□ 0.7
ATG13-226ENST00000580238 DTNBO60941 627 aa19.42■□□□□ 0.7
ATG13-226ENST00000580238 CTDNEP1O95476 244 aa19.42■□□□□ 0.7
ATG13-226ENST00000580238 SCG2P13521 617 aa19.42■□□□□ 0.7
ATG13-226ENST00000580238 CNGA1P29973 690 aa19.42■□□□□ 0.7
ATG13-226ENST00000580238 USP17L6PQ6QN14 398 aa19.42■□□□□ 0.7
ATG13-226ENST00000580238 GTF3C6Q969F1 213 aa19.42■□□□□ 0.7
ATG13-226ENST00000580238 RMDN3Q96TC7 470 aa19.42■□□□□ 0.7
ATG13-226ENST00000580238 PXMP2Q9NR77 195 aa19.42■□□□□ 0.7
ATG13-226ENST00000580238 ZHX1Q9UKY1 873 aaPredicted RBP19.42■□□□□ 0.7
ATG13-226ENST00000580238 hCG_1984214I3L0E3 225 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms