RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 LRRC47Q8N1G4 583 aaKnown RBP22.94■■□□□ 1.26
LIMD2-209ENST00000580222 MKL1Q969V6 931 aa22.94■■□□□ 1.26
LIMD2-209ENST00000580222 CHMP4CQ96CF2 233 aa22.94■■□□□ 1.26
LIMD2-209ENST00000580222 SEZ6LQ9BYH1 1024 aa22.94■■□□□ 1.26
LIMD2-209ENST00000580222 ACAD9Q9H845 621 aa22.94■■□□□ 1.26
LIMD2-209ENST00000580222 MYH8P13535 1937 aa22.93■■□□□ 1.26
LIMD2-209ENST00000580222 GREB1LQ9C091 1923 aaPredicted RBP22.93■■□□□ 1.26
LIMD2-209ENST00000580222 ASB14A6NK59 587 aa22.93■■□□□ 1.26
LIMD2-209ENST00000580222 ZEB2O60315 1214 aa22.93■■□□□ 1.26
LIMD2-209ENST00000580222 SNAP25P60880 206 aa22.93■■□□□ 1.26
LIMD2-209ENST00000580222 IQSEC1Q6DN90 963 aa22.93■■□□□ 1.26
LIMD2-209ENST00000580222 PHOSPHO2Q8TCD6 241 aa22.93■■□□□ 1.26
LIMD2-209ENST00000580222 SLC9A7Q96T83 725 aa22.93■■□□□ 1.26
LIMD2-209ENST00000580222 RNF146Q9NTX7 359 aa22.93■■□□□ 1.26
LIMD2-209ENST00000580222 UBE3CQ15386 1083 aa22.92■■□□□ 1.26
LIMD2-209ENST00000580222 MUM1L1Q5H9M0 696 aa22.92■■□□□ 1.26
LIMD2-209ENST00000580222 CEP95Q96GE4 821 aa22.92■■□□□ 1.26
LIMD2-209ENST00000580222 MKNK2Q9HBH9 465 aa22.92■■□□□ 1.26
LIMD2-209ENST00000580222 Q9Y3F1 56 aa22.92■■□□□ 1.26
LIMD2-209ENST00000580222 GSG1L2A8MUP6 293 aa22.91■■□□□ 1.26
LIMD2-209ENST00000580222 PRDM1O75626 825 aa22.91■■□□□ 1.26
LIMD2-209ENST00000580222 MRE11P49959 708 aa22.91■■□□□ 1.26
LIMD2-209ENST00000580222 SBK1Q52WX2 424 aa22.91■■□□□ 1.26
LIMD2-209ENST00000580222 GDPD5Q8WTR4 605 aa22.91■■□□□ 1.26
LIMD2-209ENST00000580222 DDRGK1Q96HY6 314 aa22.91■■□□□ 1.26
LIMD2-209ENST00000580222 STRBPQ96SI9 672 aaKnown RBP22.91■■□□□ 1.26
LIMD2-209ENST00000580222 MTMR4Q9NYA4 1195 aa22.91■■□□□ 1.26
LIMD2-209ENST00000580222 BRWD1Q9NSI6 2320 aa22.9■■□□□ 1.26
LIMD2-209ENST00000580222 PRR33A8MZF0 331 aa22.9■■□□□ 1.26
LIMD2-209ENST00000580222 TRIM6-TRIM34B2RNG4 842 aa22.9■■□□□ 1.26
LIMD2-209ENST00000580222 TMEM232C9JQI7 657 aa22.9■■□□□ 1.26
LIMD2-209ENST00000580222 IQCF3P0C7M6 154 aa22.9■■□□□ 1.26
LIMD2-209ENST00000580222 SUPT20HL2P0C7V6 817 aa22.9■■□□□ 1.26
LIMD2-209ENST00000580222 PURAQ00577 322 aaKnown RBP22.9■■□□□ 1.26
LIMD2-209ENST00000580222 TTC22Q5TAA0 569 aa22.9■■□□□ 1.26
LIMD2-209ENST00000580222 KIAA1211Q6ZU35 1233 aa22.9■■□□□ 1.26
LIMD2-209ENST00000580222 TRERF1Q96PN7 1200 aa22.9■■□□□ 1.26
LIMD2-209ENST00000580222 ARPP21Q9UBL0 812 aaPredicted RBP22.9■■□□□ 1.26
LIMD2-209ENST00000580222 MYH7P12883 1935 aa22.89■■□□□ 1.25
LIMD2-209ENST00000580222 MINDY4BA8MYZ0 360 aa22.89■■□□□ 1.25
LIMD2-209ENST00000580222 BMP3P12645 472 aa22.89■■□□□ 1.25
LIMD2-209ENST00000580222 ACTN1P12814 892 aa22.89■■□□□ 1.25
LIMD2-209ENST00000580222 GPNMBQ14956 572 aa22.89■■□□□ 1.25
LIMD2-209ENST00000580222 NBPF20Q3BBV1 942 aa22.89■■□□□ 1.25
LIMD2-209ENST00000580222 SLFN13Q68D06 897 aa22.89■■□□□ 1.25
LIMD2-209ENST00000580222 FAM178BQ8IXR5 827 aa22.89■■□□□ 1.25
LIMD2-209ENST00000580222 GMCL1P1Q8NEA9 526 aa22.89■■□□□ 1.25
LIMD2-209ENST00000580222 FTOQ9C0B1 505 aaKnown RBP eCLIP22.89■■□□□ 1.25
LIMD2-209ENST00000580222 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.89■■□□□ 1.25
LIMD2-209ENST00000580222 CYP39A1Q9NYL5 469 aa22.89■■□□□ 1.25
LIMD2-209ENST00000580222 SCN5AQ14524 2016 aa22.89■■□□□ 1.25
LIMD2-209ENST00000580222 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.88■■□□□ 1.25
LIMD2-209ENST00000580222 MYL3P08590 195 aa22.88■■□□□ 1.25
LIMD2-209ENST00000580222 ALAS1P13196 640 aa22.88■■□□□ 1.25
LIMD2-209ENST00000580222 DUSP28Q4G0W2 176 aa22.88■■□□□ 1.25
LIMD2-209ENST00000580222 GJD3Q8N144 294 aa22.88■■□□□ 1.25
LIMD2-209ENST00000580222 KBTBD3Q8NAB2 608 aa22.88■■□□□ 1.25
LIMD2-209ENST00000580222 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.88■■□□□ 1.25
LIMD2-209ENST00000580222 RILPL2Q969X0 211 aa22.88■■□□□ 1.25
LIMD2-209ENST00000580222 EVI5LQ96CN4 794 aa22.88■■□□□ 1.25
LIMD2-209ENST00000580222 FSD1Q9BTV5 496 aa22.88■■□□□ 1.25
LIMD2-209ENST00000580222 GSPT1P15170 499 aaKnown RBP22.87■■□□□ 1.25
LIMD2-209ENST00000580222 TCTN1Q2MV58 587 aa22.87■■□□□ 1.25
LIMD2-209ENST00000580222 MORC4Q8TE76 937 aa22.87■■□□□ 1.25
LIMD2-209ENST00000580222 UBE2ZQ9H832 354 aaPredicted RBP22.87■■□□□ 1.25
LIMD2-209ENST00000580222 EPB41L4AQ9HCS5 686 aaPredicted RBP22.87■■□□□ 1.25
LIMD2-209ENST00000580222 KIF28PB7ZC32 967 aa22.86■■□□□ 1.25
LIMD2-209ENST00000580222 RFC2P35250 354 aa22.86■■□□□ 1.25
LIMD2-209ENST00000580222 FAM47CQ5HY64 1035 aa22.86■■□□□ 1.25
LIMD2-209ENST00000580222 ZSCAN25Q6NSZ9 544 aa22.86■■□□□ 1.25
LIMD2-209ENST00000580222 RASGRP2Q7LDG7 609 aa22.86■■□□□ 1.25
LIMD2-209ENST00000580222 ANKS1AQ92625 1134 aa22.86■■□□□ 1.25
LIMD2-209ENST00000580222 UIMC1Q96RL1 719 aa22.86■■□□□ 1.25
LIMD2-209ENST00000580222 SUGCTQ9HAC7 445 aa22.86■■□□□ 1.25
LIMD2-209ENST00000580222 VTA1Q9NP79 307 aa22.86■■□□□ 1.25
LIMD2-209ENST00000580222 MTUS1Q9ULD2 1270 aa22.86■■□□□ 1.25
LIMD2-209ENST00000580222 IL9P15248 144 aa22.85■■□□□ 1.25
LIMD2-209ENST00000580222 NHLH1Q02575 133 aa22.85■■□□□ 1.25
LIMD2-209ENST00000580222 LRRFIP1Q32MZ4 808 aaKnown RBP22.85■■□□□ 1.25
LIMD2-209ENST00000580222 MTG1Q9BT17 334 aaPredicted RBP22.85■■□□□ 1.25
LIMD2-209ENST00000580222 WDR11Q9BZH6 1224 aa22.85■■□□□ 1.25
LIMD2-209ENST00000580222 POLR3EQ9NVU0 708 aa22.85■■□□□ 1.25
LIMD2-209ENST00000580222 PITPNM1O00562 1244 aa22.84■■□□□ 1.25
LIMD2-209ENST00000580222 TTLL1O95922 423 aa22.84■■□□□ 1.25
LIMD2-209ENST00000580222 WDR5P61964 334 aaKnown RBP22.84■■□□□ 1.25
LIMD2-209ENST00000580222 DEFB103AP81534 67 aa22.84■■□□□ 1.25
LIMD2-209ENST00000580222 TKFCQ3LXA3 575 aa22.84■■□□□ 1.25
LIMD2-209ENST00000580222 LEXMQ3ZCV2 418 aa22.84■■□□□ 1.25
LIMD2-209ENST00000580222 STAG1Q8WVM7 1258 aa22.84■■□□□ 1.25
LIMD2-209ENST00000580222 OSBP2Q969R2 916 aa22.84■■□□□ 1.25
LIMD2-209ENST00000580222 CTAGE1Q96RT6 745 aa22.84■■□□□ 1.25
LIMD2-209ENST00000580222 LMCD1Q9NZU5 365 aa22.84■■□□□ 1.25
LIMD2-209ENST00000580222 ISY1Q9ULR0 285 aaKnown RBP22.84■■□□□ 1.25
LIMD2-209ENST00000580222 FDX1P10109 184 aa22.83■■□□□ 1.25
LIMD2-209ENST00000580222 KCNA5P22460 613 aa22.83■■□□□ 1.25
LIMD2-209ENST00000580222 MCCP23508 829 aa22.83■■□□□ 1.25
LIMD2-209ENST00000580222 STAT2P52630 851 aa22.83■■□□□ 1.25
LIMD2-209ENST00000580222 NSMFQ6X4W1 530 aa22.83■■□□□ 1.25
LIMD2-209ENST00000580222 ZNF444Q8N0Y2 327 aaPredicted RBP22.83■■□□□ 1.25
LIMD2-209ENST00000580222 RETREG2Q8NC44 543 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms