RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 AKNAD1Q5T1N1 836 aa15.72■□□□□ 0.11
TRAF4-214ENST00000580073 SYDE2Q5VT97 1194 aa15.72■□□□□ 0.11
TRAF4-214ENST00000580073 BTNL9Q6UXG8 535 aa15.72■□□□□ 0.11
TRAF4-214ENST00000580073 KIAA1211Q6ZU35 1233 aa15.72■□□□□ 0.11
TRAF4-214ENST00000580073 ZNF365Q70YC5 407 aa15.72■□□□□ 0.11
TRAF4-214ENST00000580073 MORC4Q8TE76 937 aa15.72■□□□□ 0.11
TRAF4-214ENST00000580073 GPHNQ9NQX3 736 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-214ENST00000580073 IL17RBQ9NRM6 502 aa15.72■□□□□ 0.11
TRAF4-214ENST00000580073 ASTN1O14525 1302 aa15.71■□□□□ 0.11
TRAF4-214ENST00000580073 PTPDC1A2A3K4 754 aa15.71■□□□□ 0.11
TRAF4-214ENST00000580073 FGBP02675 491 aa15.71■□□□□ 0.11
TRAF4-214ENST00000580073 SMPD1P17405 629 aa15.71■□□□□ 0.11
TRAF4-214ENST00000580073 CYP2C18P33260 490 aa15.71■□□□□ 0.11
TRAF4-214ENST00000580073 DUSP28Q4G0W2 176 aa15.71■□□□□ 0.11
TRAF4-214ENST00000580073 MCMDC2Q4G0Z9 681 aa15.71■□□□□ 0.11
TRAF4-214ENST00000580073 MUM1L1Q5H9M0 696 aa15.71■□□□□ 0.11
TRAF4-214ENST00000580073 RRP12Q5JTH9 1297 aaKnown RBP15.71■□□□□ 0.11
TRAF4-214ENST00000580073 RNF41Q9H4P4 317 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-214ENST00000580073 SLC28A3Q9HAS3 691 aa15.71■□□□□ 0.11
TRAF4-214ENST00000580073 TCP11L1Q9NUJ3 509 aa15.71■□□□□ 0.11
TRAF4-214ENST00000580073 WDR19Q8NEZ3 1342 aa15.7■□□□□ 0.1
TRAF4-214ENST00000580073 NMT2O60551 498 aa15.7■□□□□ 0.1
TRAF4-214ENST00000580073 KPNA6O60684 536 aa15.7■□□□□ 0.1
TRAF4-214ENST00000580073 FGRP09769 529 aa15.7■□□□□ 0.1
TRAF4-214ENST00000580073 ACRP10323 421 aa15.7■□□□□ 0.1
TRAF4-214ENST00000580073 GSPT1P15170 499 aaKnown RBP15.7■□□□□ 0.1
TRAF4-214ENST00000580073 IRX5P78411 483 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-214ENST00000580073 PPP2R5BQ15173 497 aa15.7■□□□□ 0.1
TRAF4-214ENST00000580073 TAPT1Q6NXT6 567 aa15.7■□□□□ 0.1
TRAF4-214ENST00000580073 EEPD1Q7L9B9 569 aa15.7■□□□□ 0.1
TRAF4-214ENST00000580073 IL27Q8NEV9 243 aa15.7■□□□□ 0.1
TRAF4-214ENST00000580073 DNERQ8NFT8 737 aa15.7■□□□□ 0.1
TRAF4-214ENST00000580073 TTC14Q96N46 770 aa15.7■□□□□ 0.1
TRAF4-214ENST00000580073 MAF1Q9H063 256 aa15.7■□□□□ 0.1
TRAF4-214ENST00000580073 TSPYL2Q9H2G4 693 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-214ENST00000580073 THEGQ9P2T0 379 aa15.7■□□□□ 0.1
TRAF4-214ENST00000580073 PRUNE2Q8WUY3 3088 aa15.69■□□□□ 0.1
TRAF4-214ENST00000580073 TRIP12Q14669 1992 aaPredicted RBP15.69■□□□□ 0.1
TRAF4-214ENST00000580073 MYH7BA7E2Y1 1941 aa15.69■□□□□ 0.1
TRAF4-214ENST00000580073 B4GALT4O60513 344 aa15.69■□□□□ 0.1
TRAF4-214ENST00000580073 ACTN1P12814 892 aa15.69■□□□□ 0.1
TRAF4-214ENST00000580073 PDE4DQ08499 809 aa15.69■□□□□ 0.1
TRAF4-214ENST00000580073 CCDC178Q5BJE1 867 aa15.69■□□□□ 0.1
TRAF4-214ENST00000580073 GPATCH4Q5T3I0 446 aaKnown RBP15.69■□□□□ 0.1
TRAF4-214ENST00000580073 RNF207Q6ZRF8 634 aa15.69■□□□□ 0.1
TRAF4-214ENST00000580073 MFSD6Q6ZSS7 791 aa15.69■□□□□ 0.1
TRAF4-214ENST00000580073 OR6J1Q8NGC5 347 aa15.69■□□□□ 0.1
TRAF4-214ENST00000580073 SCFD2Q8WU76 684 aa15.69■□□□□ 0.1
TRAF4-214ENST00000580073 CHMP4CQ96CF2 233 aa15.69■□□□□ 0.1
TRAF4-214ENST00000580073 NOC4LQ9BVI4 516 aaKnown RBP15.69■□□□□ 0.1
TRAF4-214ENST00000580073 WDR11Q9BZH6 1224 aa15.69■□□□□ 0.1
TRAF4-214ENST00000580073 CCDC171Q6TFL3 1326 aa15.68■□□□□ 0.1
TRAF4-214ENST00000580073 FOXP2O15409 715 aa15.68■□□□□ 0.1
TRAF4-214ENST00000580073 PDHBP11177 359 aa15.68■□□□□ 0.1
TRAF4-214ENST00000580073 RFC2P35250 354 aa15.68■□□□□ 0.1
TRAF4-214ENST00000580073 BAATQ14032 418 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-214ENST00000580073 VPS53Q5VIR6 699 aa15.68■□□□□ 0.1
TRAF4-214ENST00000580073 C16orf59Q7L2K0 433 aa15.68■□□□□ 0.1
TRAF4-214ENST00000580073 ATXN2LQ8WWM7 1075 aaKnown RBP15.68■□□□□ 0.1
TRAF4-214ENST00000580073 TMEM47Q9BQJ4 181 aa15.68■□□□□ 0.1
TRAF4-214ENST00000580073 MTG1Q9BT17 334 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-214ENST00000580073 ALDH8A1Q9H2A2 487 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-214ENST00000580073 PDGFCQ9NRA1 345 aa15.68■□□□□ 0.1
TRAF4-214ENST00000580073 SLC4A7Q9Y6M7 1214 aa15.68■□□□□ 0.1
TRAF4-214ENST00000580073 FRMPD2Q68DX3 1309 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-214ENST00000580073 ZBBXA8MT70 800 aa15.67■□□□□ 0.1
TRAF4-214ENST00000580073 NFIBO00712 420 aa15.67■□□□□ 0.1
TRAF4-214ENST00000580073 SLC16A2P36021 539 aa15.67■□□□□ 0.1
TRAF4-214ENST00000580073 PBX2P40425 430 aa15.67■□□□□ 0.1
TRAF4-214ENST00000580073 SNAP25P60880 206 aa15.67■□□□□ 0.1
TRAF4-214ENST00000580073 PTPN11Q06124 597 aaPredicted RBP15.67■□□□□ 0.1
TRAF4-214ENST00000580073 IQCA1Q86XH1 822 aa15.67■□□□□ 0.1
TRAF4-214ENST00000580073 CCDC155Q8N6L0 562 aa15.67■□□□□ 0.1
TRAF4-214ENST00000580073 ESR2Q92731 530 aa15.67■□□□□ 0.1
TRAF4-214ENST00000580073 PRDM12Q9H4Q4 367 aa15.67■□□□□ 0.1
TRAF4-214ENST00000580073 PCDHA11Q9Y5I1 949 aa15.67■□□□□ 0.1
TRAF4-214ENST00000580073 TNKSO95271 1327 aa15.67■□□□□ 0.1
TRAF4-214ENST00000580073 RBM47A0AV96 593 aaKnown RBP15.66■□□□□ 0.1
TRAF4-214ENST00000580073 TRIM6-TRIM34B2RNG4 842 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 FGAP02671 866 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 MYL3P08590 195 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 HSPD1P10809 573 aaKnown RBP15.66■□□□□ 0.1
TRAF4-214ENST00000580073 CALML3P27482 149 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 CCL23P55773 120 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 PSMC6P62333 389 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 PURAQ00577 322 aaKnown RBP15.66■□□□□ 0.1
TRAF4-214ENST00000580073 ZNF543Q08ER8 600 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 FAM47CQ5HY64 1035 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 TTC22Q5TAA0 569 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 PPP2R2DQ66LE6 453 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 NFRKBQ6P4R8 1299 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 SLC30A10Q6XR72 485 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 RASGRP2Q7LDG7 609 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 OTOP2Q7RTS6 562 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 GPCPD1Q9NPB8 672 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 PRDM6Q9NQX0 595 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 NOD1Q9Y239 953 aa15.66■□□□□ 0.1
TRAF4-214ENST00000580073 COL4A4P53420 1690 aaPredicted RBP15.66■□□□□ 0.1
TRAF4-214ENST00000580073 A0A0D9SFI3 127 aa15.65■□□□□ 0.1
TRAF4-214ENST00000580073 GRXCR1A8MXD5 290 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms