RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, human

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RARA-209	ENST00000579727	SNAI1	O95863	264 aa	Predicted RBP	18.94	■□□□□ 0.62
RARA-209	ENST00000579727	RTN1	Q16799	776 aa		18.94	■□□□□ 0.62
RARA-209	ENST00000579727	LHX8	Q68G74	356 aa		18.94	■□□□□ 0.62
RARA-209	ENST00000579727	ZNF467	Q7Z7K2	595 aa	Predicted RBP	18.94	■□□□□ 0.62
RARA-209	ENST00000579727	DIS3L	Q8TF46	1054 aa	Known RBP	18.94	■□□□□ 0.62
RARA-209	ENST00000579727	LENG1	Q96BZ8	264 aa	Predicted RBP	18.94	■□□□□ 0.62
RARA-209	ENST00000579727	LARP6	Q9BRS8	491 aa	Known RBP	18.94	■□□□□ 0.62
RARA-209	ENST00000579727	SPZ1	Q9BXG8	430 aa		18.94	■□□□□ 0.62
RARA-209	ENST00000579727	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	18.94	■□□□□ 0.62
RARA-209	ENST00000579727	DDX20	Q9UHI6	824 aa	Known RBP	18.94	■□□□□ 0.62
RARA-209	ENST00000579727	CNPY2	Q9Y2B0	182 aa		18.94	■□□□□ 0.62
RARA-209	ENST00000579727	CYP46A1	Q9Y6A2	500 aa		18.94	■□□□□ 0.62
RARA-209	ENST00000579727	SYNGAP1	Q96PV0	1343 aa		18.94	■□□□□ 0.62
RARA-209	ENST00000579727	PNMA6F	A0A0J9YX94	578 aa		18.93	■□□□□ 0.62
RARA-209	ENST00000579727	OPLAH	O14841	1288 aa		18.93	■□□□□ 0.62
RARA-209	ENST00000579727	TOB2	Q14106	344 aa	Predicted RBP	18.93	■□□□□ 0.62
RARA-209	ENST00000579727	MAMDC4	Q6UXC1	1216 aa		18.93	■□□□□ 0.62
RARA-209	ENST00000579727	RRP36	Q96EU6	259 aa	Known RBP	18.93	■□□□□ 0.62
RARA-209	ENST00000579727	CRISPLD2	Q9H0B8	497 aa		18.93	■□□□□ 0.62
RARA-209	ENST00000579727	MRPL11	Q9Y3B7	192 aa	Known RBP	18.93	■□□□□ 0.62
RARA-209	ENST00000579727		A0A0C4DFX4	3053 aa		18.93	■□□□□ 0.62
RARA-209	ENST00000579727	FARP2	O94887	1054 aa	Predicted RBP	18.92	■□□□□ 0.62
RARA-209	ENST00000579727	CFB	P00751	764 aa		18.92	■□□□□ 0.62
RARA-209	ENST00000579727	MYCN	P04198	464 aa	Predicted RBP	18.92	■□□□□ 0.62
RARA-209	ENST00000579727	ZNF865	P0CJ78	1059 aa	Predicted RBP	18.92	■□□□□ 0.62
RARA-209	ENST00000579727	CDC27	P30260	824 aa		18.92	■□□□□ 0.62
RARA-209	ENST00000579727	GNAQ	P50148	359 aa		18.92	■□□□□ 0.62
RARA-209	ENST00000579727	METAP2	P50579	478 aa	Known RBP eCLIP	18.92	■□□□□ 0.62
RARA-209	ENST00000579727	ALDH5A1	P51649	535 aa	Predicted RBP	18.92	■□□□□ 0.62
RARA-209	ENST00000579727	EEPD1	Q7L9B9	569 aa		18.92	■□□□□ 0.62
RARA-209	ENST00000579727	LZTS2	Q9BRK4	669 aa		18.92	■□□□□ 0.62
RARA-209	ENST00000579727	TM6SF1	Q9BZW5	370 aa		18.92	■□□□□ 0.62
RARA-209	ENST00000579727	SEC63	Q9UGP8	760 aa	Known RBP	18.92	■□□□□ 0.62
RARA-209	ENST00000579727	CNTNAP5	Q8WYK1	1306 aa		18.92	■□□□□ 0.62
RARA-209	ENST00000579727	SEPT4	O43236	478 aa		18.91	■□□□□ 0.62
RARA-209	ENST00000579727	ACVR2B	Q13705	512 aa		18.91	■□□□□ 0.62
RARA-209	ENST00000579727	FBXO16	Q8IX29	292 aa	Predicted RBP	18.91	■□□□□ 0.62
RARA-209	ENST00000579727	MSL3	Q8N5Y2	521 aa	Known RBP	18.91	■□□□□ 0.62
RARA-209	ENST00000579727	AGXT2	Q9BYV1	514 aa		18.91	■□□□□ 0.62
RARA-209	ENST00000579727	PRO3102	Q9H379	93 aa		18.91	■□□□□ 0.62
RARA-209	ENST00000579727	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.91	■□□□□ 0.62
RARA-209	ENST00000579727	PDRG1	Q9NUG6	133 aa		18.91	■□□□□ 0.62
RARA-209	ENST00000579727	RBM28	Q9NW13	759 aa	Known RBP	18.91	■□□□□ 0.62
RARA-209	ENST00000579727	COL20A1	Q9P218	1284 aa		18.91	■□□□□ 0.62
RARA-209	ENST00000579727	OGDHL	Q9ULD0	1010 aa		18.91	■□□□□ 0.62
RARA-209	ENST00000579727	ALPK3	Q96L96	1907 aa		18.9	■□□□□ 0.62
RARA-209	ENST00000579727	ASB14	A6NK59	587 aa		18.9	■□□□□ 0.62
RARA-209	ENST00000579727	HOXA13	P31271	388 aa	Predicted RBP	18.9	■□□□□ 0.62
RARA-209	ENST00000579727	ADD1	P35611	737 aa	Known RBP	18.9	■□□□□ 0.62
RARA-209	ENST00000579727	MCF2L2	Q86YR7	1114 aa		18.9	■□□□□ 0.62
RARA-209	ENST00000579727	SYTL5	Q8TDW5	730 aa	Predicted RBP	18.9	■□□□□ 0.62
RARA-209	ENST00000579727	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	18.9	■□□□□ 0.62
RARA-209	ENST00000579727	TAAR1	Q96RJ0	339 aa		18.9	■□□□□ 0.62
RARA-209	ENST00000579727	KATNBL1	Q9H079	304 aa		18.9	■□□□□ 0.62
RARA-209	ENST00000579727	ADD3	Q9UEY8	706 aa	Known RBP	18.9	■□□□□ 0.62
RARA-209	ENST00000579727	PPFIA3	O75145	1194 aa		18.89	■□□□□ 0.61
RARA-209	ENST00000579727	AKR1A1	P14550	325 aa		18.89	■□□□□ 0.61
RARA-209	ENST00000579727	SMARCA1	P28370	1054 aa		18.89	■□□□□ 0.61
RARA-209	ENST00000579727	MNX1	P50219	401 aa	Predicted RBP	18.89	■□□□□ 0.61
RARA-209	ENST00000579727	CCT2	P78371	535 aa	Known RBP	18.89	■□□□□ 0.61
RARA-209	ENST00000579727	RGS22	Q8NE09	1264 aa		18.89	■□□□□ 0.61
RARA-209	ENST00000579727	PAWR	Q96IZ0	340 aa	Known RBP	18.89	■□□□□ 0.61
RARA-209	ENST00000579727	ABHD16B	Q9H3Z7	469 aa		18.89	■□□□□ 0.61
RARA-209	ENST00000579727	NRBP1	Q9UHY1	535 aa		18.89	■□□□□ 0.61
RARA-209	ENST00000579727	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	18.88	■□□□□ 0.61
RARA-209	ENST00000579727	ADCY6	O43306	1168 aa		18.88	■□□□□ 0.61
RARA-209	ENST00000579727	MSC	O60682	206 aa		18.88	■□□□□ 0.61
RARA-209	ENST00000579727	PTGS1	P23219	599 aa		18.88	■□□□□ 0.61
RARA-209	ENST00000579727	ANAPC15	P60006	121 aa		18.88	■□□□□ 0.61
RARA-209	ENST00000579727	STK3	Q13188	491 aa		18.88	■□□□□ 0.61
RARA-209	ENST00000579727	CCDC144B	Q3MJ40	725 aa		18.88	■□□□□ 0.61
RARA-209	ENST00000579727	GJC2	Q5T442	439 aa	Predicted RBP	18.88	■□□□□ 0.61
RARA-209	ENST00000579727	NOL8	Q76FK4	1167 aa	Known RBP	18.88	■□□□□ 0.61
RARA-209	ENST00000579727	FBXL16	Q8N461	479 aa		18.88	■□□□□ 0.61
RARA-209	ENST00000579727	DPF3	Q92784	378 aa		18.88	■□□□□ 0.61
RARA-209	ENST00000579727	NCOA5	Q9HCD5	579 aa	Known RBP	18.88	■□□□□ 0.61
RARA-209	ENST00000579727	PDGFC	Q9NRA1	345 aa		18.88	■□□□□ 0.61
RARA-209	ENST00000579727	EIF5B	O60841	1220 aa	Known RBP	18.87	■□□□□ 0.61
RARA-209	ENST00000579727	PGK1	P00558	417 aa		18.87	■□□□□ 0.61
RARA-209	ENST00000579727	RARB	P10826	455 aa		18.87	■□□□□ 0.61
RARA-209	ENST00000579727	EIF2AK2	P19525	551 aa	Known RBP	18.87	■□□□□ 0.61
RARA-209	ENST00000579727	PDIA3	P30101	505 aa	Known RBP	18.87	■□□□□ 0.61
RARA-209	ENST00000579727	ADCYAP1R1	P41586	468 aa		18.87	■□□□□ 0.61
RARA-209	ENST00000579727	HSD17B4	P51659	736 aa		18.87	■□□□□ 0.61
RARA-209	ENST00000579727	RCAN1	P53805	252 aa		18.87	■□□□□ 0.61
RARA-209	ENST00000579727	FUT2	Q10981	343 aa		18.87	■□□□□ 0.61
RARA-209	ENST00000579727	NID2	Q14112	1375 aa		18.87	■□□□□ 0.61
RARA-209	ENST00000579727	HEATR3	Q7Z4Q2	680 aa		18.87	■□□□□ 0.61
RARA-209	ENST00000579727	UBE2Q1	Q7Z7E8	422 aa		18.87	■□□□□ 0.61
RARA-209	ENST00000579727	XPNPEP3	Q9NQH7	507 aa		18.87	■□□□□ 0.61
RARA-209	ENST00000579727	FAM184B	Q9ULE4	1060 aa		18.87	■□□□□ 0.61
RARA-209	ENST00000579727	IRX5	P78411	483 aa	Predicted RBP	18.86	■□□□□ 0.61
RARA-209	ENST00000579727	PDE4D	Q08499	809 aa		18.86	■□□□□ 0.61
RARA-209	ENST00000579727	TRAF1	Q13077	416 aa		18.86	■□□□□ 0.61
RARA-209	ENST00000579727	TMEM63B	Q5T3F8	832 aa		18.86	■□□□□ 0.61
RARA-209	ENST00000579727	FCHSD1	Q86WN1	690 aa		18.86	■□□□□ 0.61
RARA-209	ENST00000579727	ANKLE1	Q8NAG6	615 aa		18.86	■□□□□ 0.61
RARA-209	ENST00000579727	PHKB	Q93100	1093 aa		18.86	■□□□□ 0.61
RARA-209	ENST00000579727	RMDN3	Q96TC7	470 aa		18.86	■□□□□ 0.61
RARA-209	ENST00000579727		V9GY48	417 aa	Predicted RBP	18.86	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms