RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 FZD9O00144 591 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 NFKBIEO00221 500 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 WNT7AO00755 349 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 CTNND1O60716 968 aaKnown RBP12.52□□□□□ -0.41
SKA2-204ENST00000578519 RPN1P04843 607 aaKnown RBP12.52□□□□□ -0.41
SKA2-204ENST00000578519 PRR29P0C7W0 189 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 POTEIP0CG38 1075 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 TECP42680 631 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 TXKP42681 527 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 USP14P54578 494 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 RASA3Q14644 834 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 NCAPHQ15003 741 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 IL17AQ16552 155 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 ZNF658Q5TYW1 1059 aaPredicted RBP12.52□□□□□ -0.41
SKA2-204ENST00000578519 PDXDC2PQ6P474 469 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 SV2BQ7L1I2 683 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 IGSF22Q8N9C0 903 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 ERMNQ8TAM6 284 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 NOC3LQ8WTT2 800 aaKnown RBP12.52□□□□□ -0.41
SKA2-204ENST00000578519 LPAR1Q92633 364 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 MTMR9Q96QG7 549 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 FEZ1Q99689 392 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 TMEM60Q9H2L4 133 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
SKA2-204ENST00000578519 TMEM260Q9NX78 707 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 IFNKQ9P0W0 207 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 CNOT7Q9UIV1 285 aaKnown RBP12.52□□□□□ -0.41
SKA2-204ENST00000578519 PPP2R3BQ9Y5P8 575 aa12.52□□□□□ -0.41
SKA2-204ENST00000578519 CYP3A7-CYP3A51PA0A087WV96 503 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 FOXN1O15353 648 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 TPM2P07951 284 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
SKA2-204ENST00000578519 CYP3A7P24462 503 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 LMOD1P29536 600 aaPredicted RBP12.51□□□□□ -0.41
SKA2-204ENST00000578519 ZNF76P36508 570 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 KARSQ15046 597 aaKnown RBP12.51□□□□□ -0.41
SKA2-204ENST00000578519 RASGRP2Q7LDG7 609 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 FAM20AQ96MK3 541 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 C7orf25Q9BPX7 421 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 ZNF341Q9BYN7 854 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 ANO3Q9BYT9 981 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 TMEM39BQ9GZU3 492 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 KBTBD4Q9NVX7 518 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 RWDD2AQ9UIY3 292 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 PRR12Q9ULL5 1215 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 PCDHA12Q9UN75 941 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 GJA3Q9Y6H8 435 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 ABCB11O95342 1321 aa12.51□□□□□ -0.41
SKA2-204ENST00000578519 A0A087X0B3 334 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 BICDL2A1A5D9 508 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 GCOM1H8Y6P7 765 aaPredicted RBP12.5□□□□□ -0.41
SKA2-204ENST00000578519 PIK3CDO00329 1044 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 PSMA7O14818 248 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 WDR46O15213 610 aaKnown RBP12.5□□□□□ -0.41
SKA2-204ENST00000578519 CCP110O43303 1012 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 PPP1R11O60927 126 aaPredicted RBP12.5□□□□□ -0.41
SKA2-204ENST00000578519 KIF20AO95235 890 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 FGFR1OPO95684 399 aaKnown RBP12.5□□□□□ -0.41
SKA2-204ENST00000578519 TPM1P09493 284 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 POLR2MP0CAP2 368 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 GMPSP49915 693 aaPredicted RBP12.5□□□□□ -0.41
SKA2-204ENST00000578519 UBE2SQ16763 222 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 KIF4BQ2VIQ3 1234 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 NBPF9Q3BBW0 867 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 DNTTIP2Q5QJE6 756 aaKnown RBP12.5□□□□□ -0.41
SKA2-204ENST00000578519 HAUS3Q68CZ6 603 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 CNNM4Q6P4Q7 775 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 MCF2L2Q86YR7 1114 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 MICALL2Q8IY33 904 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 GRAMD1CQ8IYS0 662 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 CCDC112Q8NEF3 446 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 SGIP1Q9BQI5 828 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 XPO4Q9C0E2 1151 aaKnown RBP12.5□□□□□ -0.41
SKA2-204ENST00000578519 TTC12Q9H892 705 aaPredicted RBP12.5□□□□□ -0.41
SKA2-204ENST00000578519 SPON1Q9HCB6 807 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 EXOC1Q9NV70 894 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 FANCLQ9NW38 375 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 MAP3K20Q9NYL2 800 aaKnown RBP12.5□□□□□ -0.41
SKA2-204ENST00000578519 NFE2L3Q9Y4A8 694 aa12.5□□□□□ -0.41
SKA2-204ENST00000578519 ZNF646O15015 1829 aaPredicted RBP12.49□□□□□ -0.41
SKA2-204ENST00000578519 ADAMTSL1Q8N6G6 1762 aa12.49□□□□□ -0.41
SKA2-204ENST00000578519 SYNRGQ9UMZ2 1314 aa12.49□□□□□ -0.41
SKA2-204ENST00000578519 PVALEFA0A1B0GWK0 134 aa12.49□□□□□ -0.41
SKA2-204ENST00000578519 A0A1W2PRG0 241 aa12.49□□□□□ -0.41
SKA2-204ENST00000578519 ADAMTS3O15072 1205 aa12.49□□□□□ -0.41
SKA2-204ENST00000578519 OFD1O75665 1012 aa12.49□□□□□ -0.41
SKA2-204ENST00000578519 PTGS1P23219 599 aa12.49□□□□□ -0.41
SKA2-204ENST00000578519 PAK1Q13153 545 aa12.49□□□□□ -0.41
SKA2-204ENST00000578519 PSMD2Q13200 908 aa12.49□□□□□ -0.41
SKA2-204ENST00000578519 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
SKA2-204ENST00000578519 NOLC1Q14978 699 aaKnown RBP eCLIP12.49□□□□□ -0.41
SKA2-204ENST00000578519 Q4G0T1 1027 aa12.49□□□□□ -0.41
SKA2-204ENST00000578519 FAM83BQ5T0W9 1011 aa12.49□□□□□ -0.41
SKA2-204ENST00000578519 MIGA2Q7L4E1 593 aa12.49□□□□□ -0.41
SKA2-204ENST00000578519 FAM114A1Q8IWE2 563 aa12.49□□□□□ -0.41
SKA2-204ENST00000578519 DHTKD1Q96HY7 919 aaPredicted RBP12.49□□□□□ -0.41
SKA2-204ENST00000578519 MBOAT7Q96N66 472 aa12.49□□□□□ -0.41
SKA2-204ENST00000578519 RANBP17Q9H2T7 1088 aaKnown RBP12.49□□□□□ -0.41
SKA2-204ENST00000578519 MYH4Q9Y623 1939 aa12.49□□□□□ -0.41
SKA2-204ENST00000578519 A0A087WWV3 80 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms