RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 CPA1P15085 419 aa16.27■□□□□ 0.2
SREBF1-217ENST00000577897 NCLP19338 710 aaKnown RBP16.27■□□□□ 0.2
SREBF1-217ENST00000577897 CCL23P55773 120 aa16.27■□□□□ 0.2
SREBF1-217ENST00000577897 EVX2Q03828 476 aa16.27■□□□□ 0.2
SREBF1-217ENST00000577897 KRT40Q6A162 431 aa16.27■□□□□ 0.2
SREBF1-217ENST00000577897 RIOX2Q8IUF8 465 aa16.27■□□□□ 0.2
SREBF1-217ENST00000577897 CCDC83Q8IWF9 413 aa16.27■□□□□ 0.2
SREBF1-217ENST00000577897 HIPK3Q9H422 1215 aa16.27■□□□□ 0.2
SREBF1-217ENST00000577897 SPC25Q9HBM1 224 aa16.27■□□□□ 0.2
SREBF1-217ENST00000577897 COG5Q9UP83 839 aa16.27■□□□□ 0.2
SREBF1-217ENST00000577897 PCDHA11Q9Y5I1 949 aa16.27■□□□□ 0.2
SREBF1-217ENST00000577897 PARP14Q460N5 1801 aa16.26■□□□□ 0.19
SREBF1-217ENST00000577897 CFAP54Q96N23 3096 aa16.26■□□□□ 0.19
SREBF1-217ENST00000577897 DUSP11O75319 330 aaKnown RBP16.26■□□□□ 0.19
SREBF1-217ENST00000577897 MBD4O95243 580 aa16.26■□□□□ 0.19
SREBF1-217ENST00000577897 BRD1O95696 1058 aa16.26■□□□□ 0.19
SREBF1-217ENST00000577897 CST5P28325 142 aaPredicted RBP16.26■□□□□ 0.19
SREBF1-217ENST00000577897 STAT3P40763 770 aa16.26■□□□□ 0.19
SREBF1-217ENST00000577897 TDO2P48775 406 aa16.26■□□□□ 0.19
SREBF1-217ENST00000577897 HMGN5P82970 282 aaKnown RBP16.26■□□□□ 0.19
SREBF1-217ENST00000577897 ME3Q16798 604 aa16.26■□□□□ 0.19
SREBF1-217ENST00000577897 ZNF274Q96GC6 653 aaPredicted RBP16.26■□□□□ 0.19
SREBF1-217ENST00000577897 KRT23Q9C075 422 aa16.26■□□□□ 0.19
SREBF1-217ENST00000577897 ARHGEF10LQ9HCE6 1279 aa16.26■□□□□ 0.19
SREBF1-217ENST00000577897 WDR46O15213 610 aaKnown RBP16.25■□□□□ 0.19
SREBF1-217ENST00000577897 STX6O43752 255 aa16.25■□□□□ 0.19
SREBF1-217ENST00000577897 SNAI1O95863 264 aaPredicted RBP16.25■□□□□ 0.19
SREBF1-217ENST00000577897 NT5C2P49902 561 aa16.25■□□□□ 0.19
SREBF1-217ENST00000577897 EXOSC10Q01780 885 aaKnown RBP16.25■□□□□ 0.19
SREBF1-217ENST00000577897 ICA1Q05084 483 aa16.25■□□□□ 0.19
SREBF1-217ENST00000577897 GSE1Q14687 1217 aa16.25■□□□□ 0.19
SREBF1-217ENST00000577897 SART3Q15020 963 aaKnown RBP16.25■□□□□ 0.19
SREBF1-217ENST00000577897 GNASQ5JWF2 1037 aa16.25■□□□□ 0.19
SREBF1-217ENST00000577897 GIMAP6Q6P9H5 292 aa16.25■□□□□ 0.19
SREBF1-217ENST00000577897 TMEM179Q6ZVK1 233 aa16.25■□□□□ 0.19
SREBF1-217ENST00000577897 HLA-CQ95604 372 aa16.25■□□□□ 0.19
SREBF1-217ENST00000577897 VCPKMTQ9H867 229 aa16.25■□□□□ 0.19
SREBF1-217ENST00000577897 FBXO28Q9NVF7 368 aa16.25■□□□□ 0.19
SREBF1-217ENST00000577897 TPCN1Q9ULQ1 816 aa16.25■□□□□ 0.19
SREBF1-217ENST00000577897 SLC4A4Q9Y6R1 1079 aa16.25■□□□□ 0.19
SREBF1-217ENST00000577897 BRWD1Q9NSI6 2320 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 PRR33A8MZF0 331 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 PI4K2BG5E9Z4 385 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 ADCY6O43306 1168 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 RAD21O60216 631 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 TRAK2O60296 914 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 CD4P01730 458 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 CHGBP05060 677 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 CA3P07451 260 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 SLC3A2P08195 630 aaKnown RBP16.24■□□□□ 0.19
SREBF1-217ENST00000577897 PCP11498 1178 aaKnown RBP16.24■□□□□ 0.19
SREBF1-217ENST00000577897 ATP2A2P16615 1042 aaKnown RBP16.24■□□□□ 0.19
SREBF1-217ENST00000577897 GJB2P29033 226 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 GABPAQ06546 454 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 TOB2Q14106 344 aaPredicted RBP16.24■□□□□ 0.19
SREBF1-217ENST00000577897 IFNL3Q8IZI9 196 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 DDX11Q96FC9 970 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 TMEM87BQ96K49 555 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 UIMC1Q96RL1 719 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 MTA3Q9BTC8 594 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 SH2D4AQ9H788 454 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 MCM9Q9NXL9 1143 aa16.24■□□□□ 0.19
SREBF1-217ENST00000577897 EPOPA6NHQ4 379 aa16.23■□□□□ 0.19
SREBF1-217ENST00000577897 PFKFB2O60825 505 aa16.23■□□□□ 0.19
SREBF1-217ENST00000577897 NHLH1Q02575 133 aa16.23■□□□□ 0.19
SREBF1-217ENST00000577897 ACVR2BQ13705 512 aa16.23■□□□□ 0.19
SREBF1-217ENST00000577897 SLFNL1Q499Z3 407 aa16.23■□□□□ 0.19
SREBF1-217ENST00000577897 TMEM67Q5HYA8 995 aa16.23■□□□□ 0.19
SREBF1-217ENST00000577897 CPLX2Q6PUV4 134 aaKnown RBP16.23■□□□□ 0.19
SREBF1-217ENST00000577897 MSL3Q8N5Y2 521 aaKnown RBP16.23■□□□□ 0.19
SREBF1-217ENST00000577897 FAM184AQ8NB25 1140 aa16.23■□□□□ 0.19
SREBF1-217ENST00000577897 BRF1Q92994 677 aa16.23■□□□□ 0.19
SREBF1-217ENST00000577897 GTF3C6Q969F1 213 aa16.23■□□□□ 0.19
SREBF1-217ENST00000577897 AGXT2Q9BYV1 514 aa16.23■□□□□ 0.19
SREBF1-217ENST00000577897 TMX2Q9Y320 296 aa16.23■□□□□ 0.19
SREBF1-217ENST00000577897 LAMA4Q16363 1823 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 VWA5AO00534 786 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 ZSCAN22P10073 491 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-217ENST00000577897 COPB2P35606 906 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 GJA9P57773 515 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 BEX3Q00994 111 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 CCDC144BQ3MJ40 725 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 LARP1BQ659C4 914 aaKnown RBP16.22■□□□□ 0.19
SREBF1-217ENST00000577897 MCTP1Q6DN14 999 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 SYNE3Q6ZMZ3 975 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 MFSD6Q6ZSS7 791 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 AMOTL1Q8IY63 956 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 ARNTL2Q8WYA1 636 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 SCLYQ96I15 445 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 CRNKL1Q9BZJ0 848 aaKnown RBP16.22■□□□□ 0.19
SREBF1-217ENST00000577897 UPF3AQ9H1J1 476 aaKnown RBP16.22■□□□□ 0.19
SREBF1-217ENST00000577897 WNT8AQ9H1J5 351 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 ARMT1Q9H993 441 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 CD320Q9NPF0 282 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-217ENST00000577897 ZNF214Q9UL59 606 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-217ENST00000577897 ZDBF2Q9HCK1 2354 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 USP34Q70CQ2 3546 aa16.22■□□□□ 0.19
SREBF1-217ENST00000577897 ERICH2A1L162 156 aa16.21■□□□□ 0.19
SREBF1-217ENST00000577897 PRC1O43663 620 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms