RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 LAMB4A4D0S4 1761 aa16.4■□□□□ 0.22
CUEDC1-206ENST00000577830 POTEMA6NI47 508 aa16.4■□□□□ 0.22
CUEDC1-206ENST00000577830 CYTH3O43739 400 aa16.4■□□□□ 0.22
CUEDC1-206ENST00000577830 USO1O60763 962 aaKnown RBP16.4■□□□□ 0.22
CUEDC1-206ENST00000577830 EIF4A3P38919 411 aaKnown RBP16.4■□□□□ 0.22
CUEDC1-206ENST00000577830 DNAAF5Q86Y56 855 aa16.4■□□□□ 0.22
CUEDC1-206ENST00000577830 TBCKQ8TEA7 893 aa16.4■□□□□ 0.22
CUEDC1-206ENST00000577830 RRP36Q96EU6 259 aaKnown RBP16.4■□□□□ 0.22
CUEDC1-206ENST00000577830 CDCA7Q9BWT1 371 aaPredicted RBP16.4■□□□□ 0.22
CUEDC1-206ENST00000577830 RAB21Q9UL25 225 aa16.4■□□□□ 0.22
CUEDC1-206ENST00000577830 SPEF2Q9C093 1822 aa16.39■□□□□ 0.22
CUEDC1-206ENST00000577830 ITIH6Q6UXX5 1313 aa16.39■□□□□ 0.22
CUEDC1-206ENST00000577830 ATP1A2P50993 1020 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 APBA1Q02410 837 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 FAM71BQ8TC56 605 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 PIGSQ96S52 555 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 SELENOOQ9BVL4 669 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 BSDC1Q9NW68 430 aaPredicted RBP16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 CAPN6Q9Y6Q1 641 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 GOLGA6BA6NDN3 693 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 EPHB6O15197 1021 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 ZEB2O60315 1214 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 OR52Z1P0C646 297 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 MS4A14Q96JA4 679 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 TMEM47Q9BQJ4 181 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 PYM1Q9BRP8 204 aaKnown RBP16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 LRRC1Q9BTT6 524 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 UBXN6Q9BZV1 441 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 CAPN11Q9UMQ6 739 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 PACSIN2Q9UNF0 486 aaPredicted RBP16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 TACC1O75410 805 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 CCDC40Q4G0X9 1142 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 TRAPPC11Q7Z392 1133 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 LRRC47Q8N1G4 583 aaKnown RBP16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 GLIS3Q8NEA6 775 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 IPO4Q8TEX9 1081 aaKnown RBP16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 ARPP21Q9UBL0 812 aaPredicted RBP16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 SHANK3Q9BYB0 1731 aa16.39■□□□□ 0.21
CUEDC1-206ENST00000577830 MAGEA1P43355 309 aa16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 TRAPPC10P48553 1259 aa16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 CKAP4Q07065 602 aaKnown RBP16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 NONOQ15233 471 aaKnown RBP eCLIP16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 ABCA3Q99758 1704 aa16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 DUSP9Q99956 384 aaKnown RBP16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 BAZ2AQ9UIF9 1905 aaKnown RBP16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 GOLGA6CA6NDK9 693 aa16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 GOLGA6DP0CG33 693 aa16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 EEF1GP26641 437 aaKnown RBP16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 GUCY2FP51841 1108 aa16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 AMPD2Q01433 879 aa16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 GOLGA6AQ9NYA3 693 aa16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 DMGDHQ9UI17 866 aaKnown RBP16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 SAMM50Q9Y512 469 aa16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 ZNF804BA4D1E1 1349 aa16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 LRRC10BA6NIK2 292 aa16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 IBSPP21815 317 aaPredicted RBP16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 RCAN1P53805 252 aa16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 GFPT1Q06210 699 aaPredicted RBP16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 TTI2Q6NXR4 508 aa16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 ATP8A2Q9NTI2 1148 aa16.38■□□□□ 0.21
CUEDC1-206ENST00000577830 CCT5P48643 541 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 SF3A3Q12874 501 aaKnown RBP eCLIP16.37■□□□□ 0.217e-10■□□□□ 10.1
CUEDC1-206ENST00000577830 MEX3CQ5U5Q3 659 aaKnown RBP16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 SRLQ86TD4 932 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 HNRNPLLQ8WVV9 542 aaKnown RBP16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 TRIM9Q9C026 710 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 TRAF5O00463 557 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 CCNE1P24864 410 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 EPS15P42566 896 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 NUP188Q5SRE5 1749 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 COL1A1P02452 1464 aaPredicted RBP16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 FTCDO95954 541 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 TUBB2AQ13885 445 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 ARL6IP4Q66PJ3 421 aaKnown RBP16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 SV2BQ7L1I2 683 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 MICALL1Q8N3F8 863 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 C4orf32Q8N8J7 132 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 EYA3Q99504 573 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 TUBB2BQ9BVA1 445 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 MYO1AQ9UBC5 1043 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 MYH7P12883 1935 aa16.37■□□□□ 0.21
CUEDC1-206ENST00000577830 UBR2Q8IWV8 1755 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 BICDL2A1A5D9 508 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 KLRC4O43908 158 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 KRT18P05783 430 aaKnown RBP16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 IVLP07476 585 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 ZBED6P86452 979 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 LRRC31Q6UY01 552 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 FAM76AQ8TAV0 307 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 SNX29Q8TEQ0 813 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 MAD2L2Q9UI95 211 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 HPCAL4Q9UM19 191 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 LRRC53A6NM62 1247 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 MPHOSPH10O00566 681 aaKnown RBP16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 PAFAH1B1P43034 410 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 KIF11P52732 1056 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 UBE2SQ16763 222 aa16.36■□□□□ 0.21
CUEDC1-206ENST00000577830 SLC35G1Q2M3R5 365 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms