RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 KRTAP10-9P60411 292 aa4.89□□□□□ -1.63
TOP2A-202ENST00000577541 TRIM26Q12899 539 aaPredicted RBP4.89□□□□□ -1.63
TOP2A-202ENST00000577541 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
TOP2A-202ENST00000577541 ARSHQ5FYA8 562 aa4.89□□□□□ -1.63
TOP2A-202ENST00000577541 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.89□□□□□ -1.63
TOP2A-202ENST00000577541 DPY19L2P1Q6NXN4 242 aa4.89□□□□□ -1.63
TOP2A-202ENST00000577541 ZG16BQ96DA0 208 aa4.89□□□□□ -1.63
TOP2A-202ENST00000577541 FRMD6Q96NE9 622 aa4.89□□□□□ -1.63
TOP2A-202ENST00000577541 PTPN18Q99952 460 aa4.89□□□□□ -1.63
TOP2A-202ENST00000577541 PCDH18Q9HCL0 1135 aa4.89□□□□□ -1.63
TOP2A-202ENST00000577541 FBLN5Q9UBX5 448 aa4.89□□□□□ -1.63
TOP2A-202ENST00000577541 C9orf118A6NHY6 69 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 DDX3XO00571 662 aaKnown RBP eCLIP4.88□□□□□ -1.63
TOP2A-202ENST00000577541 GSNP06396 782 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 EIF4BP23588 611 aaKnown RBP4.88□□□□□ -1.63
TOP2A-202ENST00000577541 MCM7P33993 719 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 INHBCP55103 352 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 PPP2CBP62714 309 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 PPP2CAP67775 309 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 MEI1Q5TIA1 1274 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 CYP2R1Q6VVX0 501 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 KYQ8NBH2 561 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 USP33Q8TEY7 942 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 GATAD2BQ8WXI9 593 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 ZNF503Q96F45 646 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 PEX11GQ96HA9 241 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 SLC12A9Q9BXP2 914 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 JADE2Q9NQC1 790 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 RNF19AQ9NV58 838 aa4.88□□□□□ -1.63
TOP2A-202ENST00000577541 EPHB4P54760 987 aa4.87□□□□□ -1.63
TOP2A-202ENST00000577541 MLECQ14165 292 aa4.87□□□□□ -1.63
TOP2A-202ENST00000577541 CABP7Q86V35 215 aa4.87□□□□□ -1.63
TOP2A-202ENST00000577541 TTLL6Q8N841 843 aa4.87□□□□□ -1.63
TOP2A-202ENST00000577541 Q8TCH9 128 aa4.87□□□□□ -1.63
TOP2A-202ENST00000577541 BIN2Q9UBW5 565 aaPredicted RBP4.87□□□□□ -1.63
TOP2A-202ENST00000577541 NUDT5Q9UKK9 219 aa4.87□□□□□ -1.63
TOP2A-202ENST00000577541 FBXL21Q9UKT6 434 aa4.87□□□□□ -1.63
TOP2A-202ENST00000577541 PCDHB12Q9Y5F1 795 aa4.87□□□□□ -1.63
TOP2A-202ENST00000577541 NARSO43776 548 aaKnown RBP4.86□□□□□ -1.63
TOP2A-202ENST00000577541 CLEC3AO75596 197 aa4.86□□□□□ -1.63
TOP2A-202ENST00000577541 ZBTB7AO95365 584 aa4.86□□□□□ -1.63
TOP2A-202ENST00000577541 C8BP07358 591 aa4.86□□□□□ -1.63
TOP2A-202ENST00000577541 KCNA1Q09470 495 aa4.86□□□□□ -1.63
TOP2A-202ENST00000577541 RNF207Q6ZRF8 634 aa4.86□□□□□ -1.63
TOP2A-202ENST00000577541 ARHGEF18Q6ZSZ5 1173 aa4.86□□□□□ -1.63
TOP2A-202ENST00000577541 TRAIPQ9BWF2 469 aa4.86□□□□□ -1.63
TOP2A-202ENST00000577541 FGF10O15520 208 aaPredicted RBP4.85□□□□□ -1.63
TOP2A-202ENST00000577541 L1CAMP32004 1257 aa4.85□□□□□ -1.63
TOP2A-202ENST00000577541 CAMK2GQ13555 558 aaPredicted RBP4.85□□□□□ -1.63
TOP2A-202ENST00000577541 PRR31Q5SQ13 230 aa4.85□□□□□ -1.63
TOP2A-202ENST00000577541 SLFN13Q68D06 897 aa4.85□□□□□ -1.63
TOP2A-202ENST00000577541 STK32CQ86UX6 486 aa4.85□□□□□ -1.63
TOP2A-202ENST00000577541 RGS22Q8NE09 1264 aa4.85□□□□□ -1.63
TOP2A-202ENST00000577541 FBXO27Q8NI29 283 aa4.85□□□□□ -1.63
TOP2A-202ENST00000577541 CSRNP2Q9H175 543 aa4.85□□□□□ -1.63
TOP2A-202ENST00000577541 PRR13Q9NZ81 148 aa4.85□□□□□ -1.63
TOP2A-202ENST00000577541 PF4P02776 101 aa4.84□□□□□ -1.63
TOP2A-202ENST00000577541 PRKD1Q15139 912 aaPredicted RBP4.84□□□□□ -1.63
TOP2A-202ENST00000577541 NRN1LQ496H8 165 aa4.84□□□□□ -1.63
TOP2A-202ENST00000577541 HS1BP3Q53T59 392 aa4.84□□□□□ -1.63
TOP2A-202ENST00000577541 CWF19L1Q69YN2 538 aaKnown RBP4.84□□□□□ -1.63
TOP2A-202ENST00000577541 DSCC1Q9BVC3 393 aa4.84□□□□□ -1.63
TOP2A-202ENST00000577541 SRRTQ9BXP5 876 aaKnown RBP4.84□□□□□ -1.63
TOP2A-202ENST00000577541 MKRN2Q9H000 416 aaKnown RBP4.84□□□□□ -1.63
TOP2A-202ENST00000577541 KRTAP29-1A8MX34 341 aaPredicted RBP4.83□□□□□ -1.64
TOP2A-202ENST00000577541 PPP1R11O60927 126 aaPredicted RBP4.83□□□□□ -1.64
TOP2A-202ENST00000577541 TBC1D8O95759 1140 aa4.83□□□□□ -1.64
TOP2A-202ENST00000577541 CYP1A1P04798 512 aaPredicted RBP4.83□□□□□ -1.64
TOP2A-202ENST00000577541 IL12RB1P42701 662 aa4.83□□□□□ -1.64
TOP2A-202ENST00000577541 LMNB2Q03252 620 aa4.83□□□□□ -1.64
TOP2A-202ENST00000577541 TMEM192Q8IY95 271 aa4.83□□□□□ -1.64
TOP2A-202ENST00000577541 NETO2Q8NC67 525 aa4.83□□□□□ -1.64
TOP2A-202ENST00000577541 MBD6Q96DN6 1003 aa4.83□□□□□ -1.64
TOP2A-202ENST00000577541 PATL2C9JE40 543 aaKnown RBP4.82□□□□□ -1.64
TOP2A-202ENST00000577541 AUHQ13825 339 aaKnown RBP4.82□□□□□ -1.64
TOP2A-202ENST00000577541 LSM12Q3MHD2 195 aaKnown RBP4.82□□□□□ -1.64
TOP2A-202ENST00000577541 FAM26EQ8N5C1 309 aa4.82□□□□□ -1.64
TOP2A-202ENST00000577541 NEU4Q8WWR8 484 aaPredicted RBP4.82□□□□□ -1.64
TOP2A-202ENST00000577541 PTCHD1Q96NR3 888 aa4.82□□□□□ -1.64
TOP2A-202ENST00000577541 NOC4LQ9BVI4 516 aaKnown RBP4.82□□□□□ -1.64
TOP2A-202ENST00000577541 GMIPQ9P107 970 aa4.82□□□□□ -1.64
TOP2A-202ENST00000577541 P4HBP07237 508 aaKnown RBP4.81□□□□□ -1.64
TOP2A-202ENST00000577541 GNA15P30679 374 aa4.81□□□□□ -1.64
TOP2A-202ENST00000577541 CCNFP41002 786 aa4.81□□□□□ -1.64
TOP2A-202ENST00000577541 NOP2P46087 812 aaKnown RBP4.81□□□□□ -1.64
TOP2A-202ENST00000577541 PTH1RQ03431 593 aa4.81□□□□□ -1.64
TOP2A-202ENST00000577541 PKN3Q6P5Z2 889 aa4.81□□□□□ -1.64
TOP2A-202ENST00000577541 LZTR1Q8N653 840 aa4.81□□□□□ -1.64
TOP2A-202ENST00000577541 AK5Q9Y6K8 562 aa4.81□□□□□ -1.64
TOP2A-202ENST00000577541 H0Y8X5 98 aa4.8□□□□□ -1.64
TOP2A-202ENST00000577541 PLSCR1O15162 318 aa4.8□□□□□ -1.64
TOP2A-202ENST00000577541 SHOXO15266 292 aa4.8□□□□□ -1.64
TOP2A-202ENST00000577541 USP39Q53GS9 565 aaKnown RBP4.8□□□□□ -1.64
TOP2A-202ENST00000577541 PRAMEF18Q5VWM3 479 aa4.8□□□□□ -1.64
TOP2A-202ENST00000577541 OVOS1Q6IE37 1185 aa4.8□□□□□ -1.64
TOP2A-202ENST00000577541 CD300LDQ6UXZ3 194 aa4.8□□□□□ -1.64
TOP2A-202ENST00000577541 ETV3LQ6ZN32 361 aa4.8□□□□□ -1.64
TOP2A-202ENST00000577541 REC114Q7Z4M0 266 aa4.8□□□□□ -1.64
TOP2A-202ENST00000577541 ZSCAN29Q8IWY8 852 aaPredicted RBP4.8□□□□□ -1.64
TOP2A-202ENST00000577541 KBTBD2Q8IY47 623 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms