RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 TNMDQ9H2S6 317 aa17.21■□□□□ 0.35
IFT20-204ENST00000577498 HOXC10Q9NYD6 342 aa17.21■□□□□ 0.35
IFT20-204ENST00000577498 LOC285556D6RIA3 1793 aa17.2■□□□□ 0.34
IFT20-204ENST00000577498 PTPRFP10586 1907 aa17.2■□□□□ 0.34
IFT20-204ENST00000577498 SYCE3A1L190 88 aa17.2■□□□□ 0.34
IFT20-204ENST00000577498 SPDYE3A6NKU9 549 aa17.2■□□□□ 0.34
IFT20-204ENST00000577498 ATP2A1O14983 1001 aa17.2■□□□□ 0.34
IFT20-204ENST00000577498 CCNT1O60563 726 aaKnown RBP17.2■□□□□ 0.34
IFT20-204ENST00000577498 LONP1P36776 959 aaKnown RBP17.2■□□□□ 0.34
IFT20-204ENST00000577498 SYKP43405 635 aa17.2■□□□□ 0.34
IFT20-204ENST00000577498 SAMD1Q6SPF0 538 aaPredicted RBP17.2■□□□□ 0.34
IFT20-204ENST00000577498 LRSAM1Q6UWE0 723 aa17.2■□□□□ 0.34
IFT20-204ENST00000577498 MOB2Q70IA6 237 aa17.2■□□□□ 0.34
IFT20-204ENST00000577498 CRYGNQ8WXF5 182 aa17.2■□□□□ 0.34
IFT20-204ENST00000577498 ATG4CQ96DT6 458 aa17.2■□□□□ 0.34
IFT20-204ENST00000577498 OTUD5Q96G74 571 aa17.2■□□□□ 0.34
IFT20-204ENST00000577498 CSRNP2Q9H175 543 aa17.2■□□□□ 0.34
IFT20-204ENST00000577498 EHMT1Q9H9B1 1298 aa17.2■□□□□ 0.34
IFT20-204ENST00000577498 MAP3K20Q9NYL2 800 aaKnown RBP17.2■□□□□ 0.34
IFT20-204ENST00000577498 MRVI1Q9Y6F6 885 aa17.2■□□□□ 0.34
IFT20-204ENST00000577498 RLFQ13129 1914 aa17.19■□□□□ 0.34
IFT20-204ENST00000577498 CYP3A7-CYP3A51PA0A087WV96 503 aa17.19■□□□□ 0.34
IFT20-204ENST00000577498 TRAF5O00463 557 aa17.19■□□□□ 0.34
IFT20-204ENST00000577498 IRF6O14896 467 aa17.19■□□□□ 0.34
IFT20-204ENST00000577498 ZNF202O95125 648 aa17.19■□□□□ 0.34
IFT20-204ENST00000577498 OR52Z1P0C646 297 aa17.19■□□□□ 0.34
IFT20-204ENST00000577498 CYP3A7P24462 503 aa17.19■□□□□ 0.34
IFT20-204ENST00000577498 HOXA7P31268 230 aaPredicted RBP17.19■□□□□ 0.34
IFT20-204ENST00000577498 SREBF1P36956 1147 aa17.19■□□□□ 0.34
IFT20-204ENST00000577498 GRIN1Q05586 938 aa17.19■□□□□ 0.34
IFT20-204ENST00000577498 REPS2Q8NFH8 660 aa17.19■□□□□ 0.34
IFT20-204ENST00000577498 CNKSR2Q8WXI2 1034 aa17.19■□□□□ 0.34
IFT20-204ENST00000577498 AGBL1Q96MI9 1066 aa17.19■□□□□ 0.34
IFT20-204ENST00000577498 KCNH3Q9ULD8 1083 aa17.19■□□□□ 0.34
IFT20-204ENST00000577498 FSD2A1L4K1 749 aa17.18■□□□□ 0.34
IFT20-204ENST00000577498 VWA3AA6NCI4 1184 aa17.18■□□□□ 0.34
IFT20-204ENST00000577498 EDIL3O43854 480 aa17.18■□□□□ 0.34
IFT20-204ENST00000577498 CYP3A4P08684 503 aa17.18■□□□□ 0.34
IFT20-204ENST00000577498 HSD17B4P51659 736 aa17.18■□□□□ 0.34
IFT20-204ENST00000577498 TKFCQ3LXA3 575 aa17.18■□□□□ 0.34
IFT20-204ENST00000577498 DTHD1Q6ZMT9 781 aa17.18■□□□□ 0.34
IFT20-204ENST00000577498 ELOA2Q8IYF1 753 aaPredicted RBP17.18■□□□□ 0.34
IFT20-204ENST00000577498 CLEC4DQ8WXI8 215 aa17.18■□□□□ 0.34
IFT20-204ENST00000577498 OPTNQ96CV9 577 aa17.18■□□□□ 0.34
IFT20-204ENST00000577498 SLC10A4Q96EP9 437 aa17.18■□□□□ 0.34
IFT20-204ENST00000577498 MBOAT7Q96N66 472 aa17.18■□□□□ 0.34
IFT20-204ENST00000577498 PYM1Q9BRP8 204 aaKnown RBP17.18■□□□□ 0.34
IFT20-204ENST00000577498 TMEM60Q9H2L4 133 aa17.18■□□□□ 0.34
IFT20-204ENST00000577498 RAVER2Q9HCJ3 691 aaKnown RBP17.18■□□□□ 0.34
IFT20-204ENST00000577498 USP25Q9UHP3 1055 aa17.18■□□□□ 0.34
IFT20-204ENST00000577498 CFBP00751 764 aa17.17■□□□□ 0.34
IFT20-204ENST00000577498 TAL1P17542 331 aaPredicted RBP17.17■□□□□ 0.34
IFT20-204ENST00000577498 ARHGAP4P98171 946 aa17.17■□□□□ 0.34
IFT20-204ENST00000577498 FASTKD5Q7L8L6 764 aaKnown RBP17.17■□□□□ 0.34
IFT20-204ENST00000577498 CPXCR1Q8N123 301 aa17.17■□□□□ 0.34
IFT20-204ENST00000577498 MB21D1Q8N884 522 aa17.17■□□□□ 0.34
IFT20-204ENST00000577498 AK8Q96MA6 479 aa17.17■□□□□ 0.34
IFT20-204ENST00000577498 MTMR9Q96QG7 549 aa17.17■□□□□ 0.34
IFT20-204ENST00000577498 GBA2Q9HCG7 927 aaPredicted RBP17.17■□□□□ 0.34
IFT20-204ENST00000577498 NMRK2Q9NPI5 230 aa17.17■□□□□ 0.34
IFT20-204ENST00000577498 RABGAP1Q9Y3P9 1069 aa17.17■□□□□ 0.34
IFT20-204ENST00000577498 MYH7BA7E2Y1 1941 aa17.16■□□□□ 0.34
IFT20-204ENST00000577498 GOLGA6L3A6NEY3 463 aa17.16■□□□□ 0.34
IFT20-204ENST00000577498 SPDYE16A6NNV3 312 aaPredicted RBP17.16■□□□□ 0.34
IFT20-204ENST00000577498 TDP2O95551 362 aa17.16■□□□□ 0.34
IFT20-204ENST00000577498 ALAS1P13196 640 aa17.16■□□□□ 0.34
IFT20-204ENST00000577498 HOXA13P31271 388 aaPredicted RBP17.16■□□□□ 0.34
IFT20-204ENST00000577498 CIITAP33076 1130 aa17.16■□□□□ 0.34
IFT20-204ENST00000577498 PABPC4Q13310 644 aaKnown RBP eCLIP17.16■□□□□ 0.34
IFT20-204ENST00000577498 SNAPC2Q13487 334 aa17.16■□□□□ 0.34
IFT20-204ENST00000577498 IL17AQ16552 155 aa17.16■□□□□ 0.34
IFT20-204ENST00000577498 CAMK4Q16566 473 aa17.16■□□□□ 0.34
IFT20-204ENST00000577498 CALCRLQ16602 461 aa17.16■□□□□ 0.34
IFT20-204ENST00000577498 LBX2Q6XYB7 198 aa17.16■□□□□ 0.34
IFT20-204ENST00000577498 GADL1Q6ZQY3 521 aa17.16■□□□□ 0.34
IFT20-204ENST00000577498 C2orf69Q8N8R5 385 aa17.16■□□□□ 0.34
IFT20-204ENST00000577498 P2RX7Q99572 595 aaKnown RBP17.16■□□□□ 0.34
IFT20-204ENST00000577498 SDF4Q9BRK5 362 aa17.16■□□□□ 0.34
IFT20-204ENST00000577498 ZNF408Q9H9D4 720 aa17.16■□□□□ 0.34
IFT20-204ENST00000577498 DDX25Q9UHL0 483 aaKnown RBP17.16■□□□□ 0.34
IFT20-204ENST00000577498 AGTPBP1Q9UPW5 1226 aa17.16■□□□□ 0.34
IFT20-204ENST00000577498 SMCHD1A6NHR9 2005 aa17.15■□□□□ 0.34
IFT20-204ENST00000577498 TXLNAP40222 546 aa17.15■□□□□ 0.34
IFT20-204ENST00000577498 SPECC1Q5M775 1068 aa17.15■□□□□ 0.34
IFT20-204ENST00000577498 TREML2Q5T2D2 321 aa17.15■□□□□ 0.34
IFT20-204ENST00000577498 CHADLQ6NUI6 762 aa17.15■□□□□ 0.34
IFT20-204ENST00000577498 KANK3Q6NY19 840 aa17.15■□□□□ 0.34
IFT20-204ENST00000577498 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
IFT20-204ENST00000577498 SYMPKQ92797 1274 aaKnown RBP17.15■□□□□ 0.34
IFT20-204ENST00000577498 CCDC34Q96HJ3 373 aa17.15■□□□□ 0.34
IFT20-204ENST00000577498 TEX13BQ9BXU2 312 aa17.15■□□□□ 0.34
IFT20-204ENST00000577498 TSPY26PQ9H489 355 aa17.15■□□□□ 0.34
IFT20-204ENST00000577498 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.15■□□□□ 0.34
IFT20-204ENST00000577498 NFIBO00712 420 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 TBX3O15119 743 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 SLC37A4O43826 429 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 CELF2O95319 508 aaKnown RBP17.14■□□□□ 0.33
IFT20-204ENST00000577498 CCDC192P0DO97 292 aa17.14■□□□□ 0.33
IFT20-204ENST00000577498 FXR2P51116 673 aaKnown RBP eCLIP17.14■□□□□ 0.33
IFT20-204ENST00000577498 MOGSQ13724 837 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms