RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 KRT86O43790 486 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 GIGYF1O75420 1035 aaPredicted RBP9.61□□□□□ -0.87
CDH8-203ENST00000577390 RBM6P78332 1123 aaKnown RBP9.61□□□□□ -0.87
CDH8-203ENST00000577390 ANO4Q32M45 955 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 LARGE2Q8N3Y3 721 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 KLHDC4Q8TBB5 520 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 MLXIPQ9HAP2 919 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 KLF15Q9UIH9 416 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 ENOX1Q8TC92 643 aaKnown RBP9.61□□□□□ -0.87
CDH8-203ENST00000577390 CCDC42Q96M95 316 aa9.61□□□□□ -0.87
CDH8-203ENST00000577390 E9PMD0 336 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 ZNF189O75820 626 aaPredicted RBP9.6□□□□□ -0.87
CDH8-203ENST00000577390 USH1GQ495M9 461 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 LBHD1Q9BQE6 289 aaPredicted RBP9.6□□□□□ -0.87
CDH8-203ENST00000577390 MIS12Q9H081 205 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 PPP2R2CQ9Y2T4 447 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 FIS1Q9Y3D6 152 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 CCDC8Q9H0W5 538 aaPredicted RBP9.6□□□□□ -0.87
CDH8-203ENST00000577390 SLC4A4Q9Y6R1 1079 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 KARSQ15046 597 aaKnown RBP9.6□□□□□ -0.87
CDH8-203ENST00000577390 AARS2Q5JTZ9 985 aaKnown RBP9.6□□□□□ -0.87
CDH8-203ENST00000577390 TSGA10Q9BZW7 698 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 NYXQ9GZU5 481 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 UTP6Q9NYH9 597 aaKnown RBP9.6□□□□□ -0.87
CDH8-203ENST00000577390 SDSP20132 328 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 FAM81AQ8TBF8 368 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 MCM9Q9NXL9 1143 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 E2F6O75461 281 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 CD2BP2O95400 341 aaKnown RBP9.6□□□□□ -0.87
CDH8-203ENST00000577390 BAG2O95816 211 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 RALGDSQ12967 914 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 DACH2Q96NX9 599 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 UNC45AQ9H3U1 944 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 KLHL24Q6TFL4 600 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 TRMT10CQ7L0Y3 403 aaKnown RBP9.6□□□□□ -0.87
CDH8-203ENST00000577390 NBPF15Q8N660 670 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 ADPGKQ9BRR6 497 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 CCDC159P0C7I6 412 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 NUP62P37198 522 aaPredicted RBP9.6□□□□□ -0.87
CDH8-203ENST00000577390 SH3KBP1Q96B97 665 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 HAUS1Q96CS2 278 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 THEGQ9P2T0 379 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 NBNO60934 754 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 RPS6KA5O75582 802 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 RRS1Q15050 365 aaKnown RBP9.6□□□□□ -0.87
CDH8-203ENST00000577390 MAD1L1Q9Y6D9 718 aa9.6□□□□□ -0.87
CDH8-203ENST00000577390 GSNP06396 782 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 IMPDH2P12268 514 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 PMLP29590 882 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 PMS1P54277 932 aaKnown RBP9.59□□□□□ -0.87
CDH8-203ENST00000577390 ANKRD20A3Q5VUR7 823 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 GPCPD1Q9NPB8 672 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 AATFQ9NY61 560 aaKnown RBP eCLIP9.59□□□□□ -0.87
CDH8-203ENST00000577390 RASIP1Q5U651 963 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 ARHGAP18Q8N392 663 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 ESR2Q92731 530 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 EPS15L1Q9UBC2 864 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 SAP30BPQ9UHR5 308 aaKnown RBP9.59□□□□□ -0.87
CDH8-203ENST00000577390 FBXO2Q9UK22 296 aaPredicted RBP9.59□□□□□ -0.87
CDH8-203ENST00000577390 ZBED4O75132 1171 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 TNFAIP3P21580 790 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 BAZ2BQ9UIF8 2168 aaKnown RBP9.59□□□□□ -0.87
CDH8-203ENST00000577390 GRXCR2A6NFK2 248 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 MEFVO15553 781 aaPredicted RBP9.59□□□□□ -0.87
CDH8-203ENST00000577390 GJA8P48165 433 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 MCMDC2Q4G0Z9 681 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 FRA10AC1Q70Z53 315 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 PDZD4Q76G19 769 aaPredicted RBP9.59□□□□□ -0.87
CDH8-203ENST00000577390 ANKRD49Q8WVL7 239 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 CTTNBP2NLQ9P2B4 639 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 BCS1LQ9Y276 419 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 DAPK1P53355 1430 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 ARHGEF35A5YM69 484 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 DKC1O60832 514 aaKnown RBP eCLIP9.59□□□□□ -0.87
CDH8-203ENST00000577390 TRIM32Q13049 653 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 IRAK1BP1Q5VVH5 260 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 LVRNQ6Q4G3 990 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 TRIM45Q9H8W5 580 aaPredicted RBP9.59□□□□□ -0.87
CDH8-203ENST00000577390 ATP8A1Q9Y2Q0 1164 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 ACTN4O43707 911 aaKnown RBP9.59□□□□□ -0.87
CDH8-203ENST00000577390 HNRNPCP07910 306 aaKnown RBP eCLIP9.59□□□□□ -0.87
CDH8-203ENST00000577390 GNAQP50148 359 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 ANKRD65E5RJM6 399 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 PRPF4O43172 522 aaKnown RBP eCLIP9.59□□□□□ -0.87
CDH8-203ENST00000577390 C21orf2O43822 256 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 PLCG2P16885 1265 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 KCNJ6P48051 423 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 PHKG1Q16816 387 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 PRAM1Q96QH2 718 aa9.59□□□□□ -0.87
CDH8-203ENST00000577390 FAF1Q9UNN5 650 aaPredicted RBP9.59□□□□□ -0.87
CDH8-203ENST00000577390 RTN1Q16799 776 aa9.59□□□□□ -0.88
CDH8-203ENST00000577390 ZNF394Q53GI3 561 aa9.59□□□□□ -0.88
CDH8-203ENST00000577390 ALS2CLQ60I27 953 aa9.59□□□□□ -0.88
CDH8-203ENST00000577390 SIX5Q8N196 739 aa9.59□□□□□ -0.88
CDH8-203ENST00000577390 VIPAS39Q9H9C1 493 aa9.59□□□□□ -0.88
CDH8-203ENST00000577390 A1CFQ9NQ94 594 aaKnown RBP9.59□□□□□ -0.88
CDH8-203ENST00000577390 GUCA1BQ9UMX6 200 aa9.59□□□□□ -0.88
CDH8-203ENST00000577390 SYKP43405 635 aa9.58□□□□□ -0.88
CDH8-203ENST00000577390 IDI1Q13907 227 aa9.58□□□□□ -0.88
CDH8-203ENST00000577390 ATL3Q6DD88 541 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms