RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 KIAA1217Q5T5P2 1943 aa17.47■□□□□ 0.39
MKS1-205ENST00000577315 ITGB8P26012 769 aa17.47■□□□□ 0.39
MKS1-205ENST00000577315 SMAD3P84022 425 aaKnown RBP17.47■□□□□ 0.39
MKS1-205ENST00000577315 BEX3Q00994 111 aa17.47■□□□□ 0.39
MKS1-205ENST00000577315 DUSP28Q4G0W2 176 aa17.47■□□□□ 0.39
MKS1-205ENST00000577315 C9orf50Q5SZB4 431 aa17.47■□□□□ 0.39
MKS1-205ENST00000577315 ZNF697Q5TEC3 545 aa17.47■□□□□ 0.39
MKS1-205ENST00000577315 EEPD1Q7L9B9 569 aa17.47■□□□□ 0.39
MKS1-205ENST00000577315 PDGFCQ9NRA1 345 aa17.47■□□□□ 0.39
MKS1-205ENST00000577315 TBX21Q9UL17 535 aa17.47■□□□□ 0.39
MKS1-205ENST00000577315 TNKSO95271 1327 aa17.47■□□□□ 0.39
MKS1-205ENST00000577315 ABCB11O95342 1321 aa17.47■□□□□ 0.39
MKS1-205ENST00000577315 RBM47A0AV96 593 aaKnown RBP17.46■□□□□ 0.39
MKS1-205ENST00000577315 NKRFO15226 690 aaKnown RBP eCLIP17.46■□□□□ 0.39
MKS1-205ENST00000577315 PARP1P09874 1014 aaKnown RBP17.46■□□□□ 0.39
MKS1-205ENST00000577315 GOLGA8HP0CJ92 632 aa17.46■□□□□ 0.39
MKS1-205ENST00000577315 CALML3P27482 149 aa17.46■□□□□ 0.39
MKS1-205ENST00000577315 PDE4AP27815 886 aa17.46■□□□□ 0.39
MKS1-205ENST00000577315 RPS6P62753 249 aaKnown RBP17.46■□□□□ 0.39
MKS1-205ENST00000577315 IRX5P78411 483 aaPredicted RBP17.46■□□□□ 0.39
MKS1-205ENST00000577315 PDE4DQ08499 809 aa17.46■□□□□ 0.39
MKS1-205ENST00000577315 TRDNQ13061 729 aa17.46■□□□□ 0.39
MKS1-205ENST00000577315 MFSD5Q6N075 450 aa17.46■□□□□ 0.39
MKS1-205ENST00000577315 FAM126BQ8IXS8 530 aa17.46■□□□□ 0.39
MKS1-205ENST00000577315 ENAHQ8N8S7 591 aaPredicted RBP17.46■□□□□ 0.39
MKS1-205ENST00000577315 UBA5Q9GZZ9 404 aa17.46■□□□□ 0.39
MKS1-205ENST00000577315 GSPT1P15170 499 aaKnown RBP17.45■□□□□ 0.38
MKS1-205ENST00000577315 PPIGQ13427 754 aaKnown RBP eCLIP17.45■□□□□ 0.382e-6■■■■□ 19.3
MKS1-205ENST00000577315 ITGA7Q13683 1181 aa17.45■□□□□ 0.38
MKS1-205ENST00000577315 CDC37Q16543 378 aaPredicted RBP17.45■□□□□ 0.38
MKS1-205ENST00000577315 BRDTQ58F21 947 aaPredicted RBP17.45■□□□□ 0.38
MKS1-205ENST00000577315 IFIT1BQ5T764 474 aaKnown RBP17.45■□□□□ 0.38
MKS1-205ENST00000577315 CXCL17Q6UXB2 119 aa17.45■□□□□ 0.38
MKS1-205ENST00000577315 SLC30A10Q6XR72 485 aa17.45■□□□□ 0.38
MKS1-205ENST00000577315 MCF2L2Q86YR7 1114 aa17.45■□□□□ 0.38
MKS1-205ENST00000577315 TMEM199Q8N511 208 aa17.45■□□□□ 0.38
MKS1-205ENST00000577315 SLC43A3Q8NBI5 491 aa17.45■□□□□ 0.38
MKS1-205ENST00000577315 RNPC3Q96LT9 517 aaKnown RBP17.45■□□□□ 0.38
MKS1-205ENST00000577315 PURBQ96QR8 312 aaKnown RBP17.45■□□□□ 0.38
MKS1-205ENST00000577315 WDR11Q9BZH6 1224 aa17.45■□□□□ 0.38
MKS1-205ENST00000577315 POLR3EQ9NVU0 708 aa17.45■□□□□ 0.38
MKS1-205ENST00000577315 U3KPZ7 1027 aaPredicted RBP17.45■□□□□ 0.38
MKS1-205ENST00000577315 CD4P01730 458 aa17.44■□□□□ 0.38
MKS1-205ENST00000577315 EDNRBP24530 442 aa17.44■□□□□ 0.38
MKS1-205ENST00000577315 CPT1AP50416 773 aa17.44■□□□□ 0.38
MKS1-205ENST00000577315 USH1GQ495M9 461 aa17.44■□□□□ 0.38
MKS1-205ENST00000577315 ADGRF4Q8IZF3 695 aa17.44■□□□□ 0.38
MKS1-205ENST00000577315 SLC17A8Q8NDX2 589 aa17.44■□□□□ 0.38
MKS1-205ENST00000577315 SCN10AQ9Y5Y9 1956 aa17.44■□□□□ 0.38
MKS1-205ENST00000577315 BAZ2BQ9UIF8 2168 aaKnown RBP17.43■□□□□ 0.38
MKS1-205ENST00000577315 MYH7BA7E2Y1 1941 aa17.43■□□□□ 0.38
MKS1-205ENST00000577315 TMEM265A0A087WTH1 108 aa17.43■□□□□ 0.38
MKS1-205ENST00000577315 DHX16O60231 1041 aaKnown RBP17.43■□□□□ 0.38
MKS1-205ENST00000577315 SCFD2Q8WU76 684 aa17.43■□□□□ 0.38
MKS1-205ENST00000577315 MRPL11Q9Y3B7 192 aaKnown RBP17.43■□□□□ 0.38
MKS1-205ENST00000577315 MYO9BQ13459 2157 aa17.43■□□□□ 0.38
MKS1-205ENST00000577315 KPNA6O60684 536 aa17.42■□□□□ 0.38
MKS1-205ENST00000577315 CHMLP26374 656 aa17.42■□□□□ 0.38
MKS1-205ENST00000577315 PPP2R5BQ15173 497 aa17.42■□□□□ 0.38
MKS1-205ENST00000577315 FBXO11Q86XK2 927 aa17.42■□□□□ 0.38
MKS1-205ENST00000577315 IL25Q9H293 177 aa17.42■□□□□ 0.38
MKS1-205ENST00000577315 GPHNQ9NQX3 736 aaPredicted RBP17.42■□□□□ 0.38
MKS1-205ENST00000577315 DDX49Q9Y6V7 483 aaKnown RBP17.42■□□□□ 0.38
MKS1-205ENST00000577315 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.41■□□□□ 0.38
MKS1-205ENST00000577315 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.41■□□□□ 0.38
MKS1-205ENST00000577315 ERICH2A1L162 156 aa17.41■□□□□ 0.38
MKS1-205ENST00000577315 EPHB4P54760 987 aa17.41■□□□□ 0.38
MKS1-205ENST00000577315 TRAF1Q13077 416 aa17.41■□□□□ 0.38
MKS1-205ENST00000577315 TTLL4Q14679 1199 aa17.41■□□□□ 0.38
MKS1-205ENST00000577315 SEC23AQ15436 765 aa17.41■□□□□ 0.38
MKS1-205ENST00000577315 QRICH1Q2TAL8 776 aa17.41■□□□□ 0.38
MKS1-205ENST00000577315 PSRC1Q6PGN9 363 aaPredicted RBP17.41■□□□□ 0.38
MKS1-205ENST00000577315 SAMD3Q8N6K7 520 aa17.41■□□□□ 0.38
MKS1-205ENST00000577315 OR6J1Q8NGC5 347 aa17.41■□□□□ 0.38
MKS1-205ENST00000577315 NSUN6Q8TEA1 469 aaKnown RBP17.41■□□□□ 0.38
MKS1-205ENST00000577315 IWS1Q96ST2 819 aa17.41■□□□□ 0.38
MKS1-205ENST00000577315 AMNQ9BXJ7 453 aa17.41■□□□□ 0.38
MKS1-205ENST00000577315 CPVLQ9H3G5 476 aa17.41■□□□□ 0.38
MKS1-205ENST00000577315 MAP3K20Q9NYL2 800 aaKnown RBP17.41■□□□□ 0.38
MKS1-205ENST00000577315 SUPT20HL2P0C7V6 817 aa17.4■□□□□ 0.38
MKS1-205ENST00000577315 SART3Q15020 963 aaKnown RBP17.4■□□□□ 0.38
MKS1-205ENST00000577315 RALYLQ86SE5 291 aaKnown RBP17.4■□□□□ 0.38
MKS1-205ENST00000577315 NCOA7Q8NI08 942 aa17.4■□□□□ 0.38
MKS1-205ENST00000577315 PPP1R12CQ9BZL4 782 aa17.4■□□□□ 0.38
MKS1-205ENST00000577315 JMJD4Q9H9V9 463 aa17.4■□□□□ 0.38
MKS1-205ENST00000577315 VAT1LQ9HCJ6 419 aa17.4■□□□□ 0.38
MKS1-205ENST00000577315 SGSM2O43147 1006 aa17.39■□□□□ 0.37
MKS1-205ENST00000577315 CYP21A2P08686 494 aa17.39■□□□□ 0.37
MKS1-205ENST00000577315 TXNP10599 105 aaKnown RBP17.39■□□□□ 0.37
MKS1-205ENST00000577315 PURAQ00577 322 aaKnown RBP17.39■□□□□ 0.37
MKS1-205ENST00000577315 TMEM63BQ5T3F8 832 aa17.39■□□□□ 0.37
MKS1-205ENST00000577315 SYTL5Q8TDW5 730 aaPredicted RBP17.39■□□□□ 0.37
MKS1-205ENST00000577315 GUCD1Q96NT3 240 aa17.39■□□□□ 0.37
MKS1-205ENST00000577315 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.39■□□□□ 0.371e-7■■■■■ 27.5
MKS1-205ENST00000577315 MTG1Q9BT17 334 aaPredicted RBP17.39■□□□□ 0.37
MKS1-205ENST00000577315 MTIF3Q9H2K0 278 aaKnown RBP17.39■□□□□ 0.37
MKS1-205ENST00000577315 SEMA6BQ9H3T3 888 aa17.39■□□□□ 0.37
MKS1-205ENST00000577315 HIPK3Q9H422 1215 aa17.39■□□□□ 0.37
MKS1-205ENST00000577315 COL6A3P12111 3177 aa17.39■□□□□ 0.37
MKS1-205ENST00000577315 GRIN2DO15399 1336 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms