RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 C4AP0C0L4 1744 aa6.62□□□□□ -1.35
CTNS-210ENST00000576979 C4BP0C0L5 1744 aa6.62□□□□□ -1.35
CTNS-210ENST00000576979 GLI3P10071 1580 aa6.61□□□□□ -1.35
CTNS-210ENST00000576979 FAM196BA6NMK8 535 aa6.61□□□□□ -1.35
CTNS-210ENST00000576979 GAS2O43903 313 aaKnown RBP6.61□□□□□ -1.35
CTNS-210ENST00000576979 PFKFB2O60825 505 aa6.61□□□□□ -1.35
CTNS-210ENST00000576979 RXRBP28702 533 aa6.61□□□□□ -1.35
CTNS-210ENST00000576979 GTF2F1P35269 517 aaKnown RBP eCLIP6.61□□□□□ -1.35
CTNS-210ENST00000576979 IL15P40933 162 aaPredicted RBP6.61□□□□□ -1.35
CTNS-210ENST00000576979 ZNF165P49910 485 aa6.61□□□□□ -1.35
CTNS-210ENST00000576979 ZNF75DP51815 510 aa6.61□□□□□ -1.35
CTNS-210ENST00000576979 FDX2Q6P4F2 183 aa6.61□□□□□ -1.35
CTNS-210ENST00000576979 FAM173BQ6P4H8 233 aa6.61□□□□□ -1.35
CTNS-210ENST00000576979 CCDC129Q6ZRS4 1044 aa6.61□□□□□ -1.35
CTNS-210ENST00000576979 RBM43Q6ZSC3 357 aaKnown RBP6.61□□□□□ -1.35
CTNS-210ENST00000576979 DDX46Q7L014 1031 aaKnown RBP6.61□□□□□ -1.35
CTNS-210ENST00000576979 EDC3Q96F86 508 aaKnown RBP6.61□□□□□ -1.35
CTNS-210ENST00000576979 DDX11Q96FC9 970 aa6.61□□□□□ -1.35
CTNS-210ENST00000576979 NEUROD6Q96NK8 337 aa6.61□□□□□ -1.35
CTNS-210ENST00000576979 RNF208Q9H0X6 261 aa6.61□□□□□ -1.35
CTNS-210ENST00000576979 PAG1Q9NWQ8 432 aa6.61□□□□□ -1.35
CTNS-210ENST00000576979 CWC25Q9NXE8 425 aaPredicted RBP6.61□□□□□ -1.35
CTNS-210ENST00000576979 BIN2Q9UBW5 565 aaPredicted RBP6.61□□□□□ -1.35
CTNS-210ENST00000576979 NAP1L2Q9ULW6 460 aaPredicted RBP6.61□□□□□ -1.35
CTNS-210ENST00000576979 USP16Q9Y5T5 823 aa6.61□□□□□ -1.35
CTNS-210ENST00000576979 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.61□□□□□ -1.35
CTNS-210ENST00000576979 MYO5AQ9Y4I1 1855 aaKnown RBP6.61□□□□□ -1.35
CTNS-210ENST00000576979 NWD2Q9ULI1 1742 aa6.61□□□□□ -1.35
CTNS-210ENST00000576979 DCCP43146 1447 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 TNS3Q68CZ2 1445 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 USP17L15C9J2P7 530 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 USP17L10C9JJH3 530 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 USP17L13C9JLJ4 530 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 USP17L12C9JPN9 530 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 USP17L11C9JVI0 530 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 USP17L21D6R901 530 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 USP17L18D6R9N7 530 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 USP17L22D6RA61 530 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 USP17L17D6RBQ6 530 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 USP17L19D6RCP7 530 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 USP17L20D6RJB6 530 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 GOLIM4O00461 696 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 NEMFO60524 1076 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 JAK2O60674 1132 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 KINO60870 393 aaKnown RBP6.6□□□□□ -1.35
CTNS-210ENST00000576979 DTNBO60941 627 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 SMNDC1O75940 238 aaKnown RBP eCLIP6.6□□□□□ -1.35
CTNS-210ENST00000576979 CYP21A2P08686 494 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 IFIT1P09914 478 aaKnown RBP6.6□□□□□ -1.35
CTNS-210ENST00000576979 ATF3P18847 181 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 PTGS1P23219 599 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 VAMP1P23763 118 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 ADMP35318 185 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 SERPINB4P48594 390 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 USP17L24Q0WX57 530 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 ZRSR1Q15695 479 aaKnown RBP6.6□□□□□ -1.35
CTNS-210ENST00000576979 NOM1Q5C9Z4 860 aaKnown RBP6.6□□□□□ -1.35
CTNS-210ENST00000576979 FAM117BQ6P1L5 589 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 LMBR1LQ6UX01 489 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 CCDC186Q7Z3E2 898 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 LUZP1Q86V48 1076 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 NPAS4Q8IUM7 802 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 CCAR1Q8IX12 1150 aaKnown RBP6.6□□□□□ -1.35
CTNS-210ENST00000576979 C17orf53Q8N3J3 647 aaPredicted RBP6.6□□□□□ -1.35
CTNS-210ENST00000576979 OR13H1Q8NG92 308 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 GIMAP7Q8NHV1 300 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 SMARCC2Q8TAQ2 1214 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 JARID2Q92833 1246 aaPredicted RBP6.6□□□□□ -1.35
CTNS-210ENST00000576979 MYO19Q96H55 970 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 RUSC1Q9BVN2 902 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 C19orf44Q9H6X5 657 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 BSDC1Q9NW68 430 aaPredicted RBP6.6□□□□□ -1.35
CTNS-210ENST00000576979 CLIP2Q9UDT6 1046 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 CTNNA3Q9UI47 895 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 PYCARDQ9ULZ3 195 aa6.6□□□□□ -1.35
CTNS-210ENST00000576979 STRCP1A6NGW2 1772 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 KAT6BQ8WYB5 2073 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 SHANK3Q9BYB0 1731 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 AKAP11Q9UKA4 1901 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 MYH2Q9UKX2 1941 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 PTPDC1A2A3K4 754 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 BECN2A8MW95 431 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 EYA2O00167 538 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 RNF113AO15541 343 aaKnown RBP6.59□□□□□ -1.35
CTNS-210ENST00000576979 CYP26A1O43174 497 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 AP5Z1O43299 807 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 ZFYP08048 801 aaPredicted RBP6.59□□□□□ -1.35
CTNS-210ENST00000576979 TPM4P67936 248 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 APOBRQ0VD83 1088 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 SCRN1Q12765 414 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 DPYDQ12882 1025 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 CCDC158Q5M9N0 1113 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 TTC39AQ5SRH9 613 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 GORABQ5T7V8 394 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 PLA2G4DQ86XP0 818 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 SMAP1Q8IYB5 467 aaPredicted RBP6.59□□□□□ -1.35
CTNS-210ENST00000576979 CEP57L1Q8IYX8 460 aa6.59□□□□□ -1.35
CTNS-210ENST00000576979 NSUN7Q8NE18 718 aaKnown RBP6.59□□□□□ -1.35
CTNS-210ENST00000576979 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.59□□□□□ -1.35
CTNS-210ENST00000576979 CLP1Q92989 425 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms