RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 TRMT13Q9NUP7 481 aaKnown RBP14.22□□□□□ -0.13
PRPF8-215ENST00000576958 PLA2G6O60733 806 aa14.21□□□□□ -0.13
PRPF8-215ENST00000576958 CALML3P27482 149 aa14.21□□□□□ -0.13
PRPF8-215ENST00000576958 ALDH5A1P51649 535 aaPredicted RBP14.21□□□□□ -0.13
PRPF8-215ENST00000576958 PPIGQ13427 754 aaKnown RBP eCLIP14.21□□□□□ -0.13
PRPF8-215ENST00000576958 B4GALNT3Q6L9W6 998 aa14.21□□□□□ -0.13
PRPF8-215ENST00000576958 KIAA1211Q6ZU35 1233 aa14.21□□□□□ -0.13
PRPF8-215ENST00000576958 HIPK3Q9H422 1215 aa14.21□□□□□ -0.13
PRPF8-215ENST00000576958 SPC25Q9HBM1 224 aa14.21□□□□□ -0.13
PRPF8-215ENST00000576958 MYO9BQ13459 2157 aa14.21□□□□□ -0.13
PRPF8-215ENST00000576958 XIRP2A4UGR9 3374 aa14.21□□□□□ -0.13
PRPF8-215ENST00000576958 PTPDC1A2A3K4 754 aa14.2□□□□□ -0.14
PRPF8-215ENST00000576958 ASB14A6NK59 587 aa14.2□□□□□ -0.14
PRPF8-215ENST00000576958 ARIH2O95376 493 aa14.2□□□□□ -0.14
PRPF8-215ENST00000576958 IGHDP01880 384 aa14.2□□□□□ -0.14
PRPF8-215ENST00000576958 PDHBP11177 359 aa14.2□□□□□ -0.14
PRPF8-215ENST00000576958 ALX1Q15699 326 aa14.2□□□□□ -0.14
PRPF8-215ENST00000576958 CCDC85BQ15834 202 aaPredicted RBP14.2□□□□□ -0.14
PRPF8-215ENST00000576958 LRRFIP1Q32MZ4 808 aaKnown RBP14.2□□□□□ -0.14
PRPF8-215ENST00000576958 TKFCQ3LXA3 575 aa14.2□□□□□ -0.14
PRPF8-215ENST00000576958 BTNL9Q6UXG8 535 aa14.2□□□□□ -0.14
PRPF8-215ENST00000576958 MORC4Q8TE76 937 aa14.2□□□□□ -0.14
PRPF8-215ENST00000576958 DCAF4Q8WV16 495 aa14.2□□□□□ -0.14
PRPF8-215ENST00000576958 UBA5Q9GZZ9 404 aa14.2□□□□□ -0.14
PRPF8-215ENST00000576958 AP5M1Q9H0R1 490 aa14.2□□□□□ -0.14
PRPF8-215ENST00000576958 IL25Q9H293 177 aa14.2□□□□□ -0.14
PRPF8-215ENST00000576958 IL23AQ9NPF7 189 aa14.2□□□□□ -0.14
PRPF8-215ENST00000576958 HELLSQ9NRZ9 838 aa14.2□□□□□ -0.14
PRPF8-215ENST00000576958 MROH7Q68CQ1 1323 aa14.19□□□□□ -0.14
PRPF8-215ENST00000576958 ARHGEF15O94989 841 aa14.19□□□□□ -0.14
PRPF8-215ENST00000576958 MYL3P08590 195 aa14.19□□□□□ -0.14
PRPF8-215ENST00000576958 TOP1P11387 765 aaKnown RBP14.19□□□□□ -0.14
PRPF8-215ENST00000576958 USH1GQ495M9 461 aa14.19□□□□□ -0.14
PRPF8-215ENST00000576958 MCMDC2Q4G0Z9 681 aa14.19□□□□□ -0.14
PRPF8-215ENST00000576958 SPRED2Q7Z698 418 aa14.19□□□□□ -0.14
PRPF8-215ENST00000576958 TMEM199Q8N511 208 aa14.19□□□□□ -0.14
PRPF8-215ENST00000576958 RILPL2Q969X0 211 aa14.19□□□□□ -0.14
PRPF8-215ENST00000576958 CCDC171Q6TFL3 1326 aa14.18□□□□□ -0.14
PRPF8-215ENST00000576958 TRIM6-TRIM34B2RNG4 842 aa14.18□□□□□ -0.14
PRPF8-215ENST00000576958 RFXAPO00287 272 aa14.18□□□□□ -0.14
PRPF8-215ENST00000576958 TLR3O15455 904 aaKnown RBP14.18□□□□□ -0.14
PRPF8-215ENST00000576958 FDX1P10109 184 aa14.18□□□□□ -0.14
PRPF8-215ENST00000576958 PURAQ00577 322 aaKnown RBP14.18□□□□□ -0.14
PRPF8-215ENST00000576958 ZNF543Q08ER8 600 aa14.18□□□□□ -0.14
PRPF8-215ENST00000576958 TTLL4Q14679 1199 aa14.18□□□□□ -0.14
PRPF8-215ENST00000576958 DEFB128Q7Z7B8 93 aa14.18□□□□□ -0.14
PRPF8-215ENST00000576958 HERVK_113Q902F9 699 aa14.18□□□□□ -0.14
PRPF8-215ENST00000576958 WDR11Q9BZH6 1224 aa14.18□□□□□ -0.14
PRPF8-215ENST00000576958 ALDH8A1Q9H2A2 487 aaPredicted RBP14.18□□□□□ -0.14
PRPF8-215ENST00000576958 COL20A1Q9P218 1284 aa14.18□□□□□ -0.14
PRPF8-215ENST00000576958 RPS6P62753 249 aaKnown RBP14.17□□□□□ -0.14
PRPF8-215ENST00000576958 HDAC1Q13547 482 aaPredicted RBP14.17□□□□□ -0.14
PRPF8-215ENST00000576958 DUSP28Q4G0W2 176 aa14.17□□□□□ -0.14
PRPF8-215ENST00000576958 IQSEC1Q6DN90 963 aa14.17□□□□□ -0.14
PRPF8-215ENST00000576958 YTHDC1Q96MU7 727 aaKnown RBP14.17□□□□□ -0.14
PRPF8-215ENST00000576958 VTA1Q9NP79 307 aa14.17□□□□□ -0.14
PRPF8-215ENST00000576958 LAMA4Q16363 1823 aa14.17□□□□□ -0.14
PRPF8-215ENST00000576958 PTPRSQ13332 1948 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 TMEM265A0A087WTH1 108 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 EPOPA6NHQ4 379 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 FGBP02675 491 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 SNHG28P0DPA3 235 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 SDSP20132 328 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 CHMP4BP1P59074 171 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 NBPF20Q3BBV1 942 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 AKNAD1Q5T1N1 836 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 KRT40Q6A162 431 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 PSRC1Q6PGN9 363 aaPredicted RBP14.16□□□□□ -0.14
PRPF8-215ENST00000576958 RNF207Q6ZRF8 634 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 TMCO2Q7Z6W1 182 aaPredicted RBP14.16□□□□□ -0.14
PRPF8-215ENST00000576958 PLEKHM2Q8IWE5 1019 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 TET1Q8NFU7 2136 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 OR6J1Q8NGC5 347 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 CERS4Q9HA82 394 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 TCP11L1Q9NUJ3 509 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 RAPGEFL1Q9UHV5 662 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 SCN10AQ9Y5Y9 1956 aa14.16□□□□□ -0.14
PRPF8-215ENST00000576958 TNKSO95271 1327 aa14.15□□□□□ -0.14
PRPF8-215ENST00000576958 TRANK1O15050 2925 aa14.15□□□□□ -0.14
PRPF8-215ENST00000576958 RBM47A0AV96 593 aaKnown RBP14.15□□□□□ -0.14
PRPF8-215ENST00000576958 IGFBP4P22692 258 aa14.15□□□□□ -0.14
PRPF8-215ENST00000576958 EDNRBP24530 442 aa14.15□□□□□ -0.14
PRPF8-215ENST00000576958 TCTN1Q2MV58 587 aa14.15□□□□□ -0.14
PRPF8-215ENST00000576958 CTAGE1Q96RT6 745 aa14.15□□□□□ -0.14
PRPF8-215ENST00000576958 ZBBXA8MT70 800 aa14.14□□□□□ -0.15
PRPF8-215ENST00000576958 B4E1Z4 1266 aa14.14□□□□□ -0.15
PRPF8-215ENST00000576958 SORBS3O60504 671 aa14.14□□□□□ -0.15
PRPF8-215ENST00000576958 KDM4AO75164 1064 aa14.14□□□□□ -0.15
PRPF8-215ENST00000576958 CABYRO75952 493 aa14.14□□□□□ -0.15
PRPF8-215ENST00000576958 FAM47CQ5HY64 1035 aa14.14□□□□□ -0.15
PRPF8-215ENST00000576958 CWC27Q6UX04 472 aaKnown RBP14.14□□□□□ -0.15
PRPF8-215ENST00000576958 MFSD6Q6ZSS7 791 aa14.14□□□□□ -0.15
PRPF8-215ENST00000576958 EXOC6Q8TAG9 804 aa14.14□□□□□ -0.15
PRPF8-215ENST00000576958 ZFP91Q96JP5 570 aaPredicted RBP14.14□□□□□ -0.15
PRPF8-215ENST00000576958 NECAB3Q96P71 396 aaPredicted RBP14.14□□□□□ -0.15
PRPF8-215ENST00000576958 TAAR1Q96RJ0 339 aa14.14□□□□□ -0.15
PRPF8-215ENST00000576958 TANC1Q9C0D5 1861 aa14.14□□□□□ -0.15
PRPF8-215ENST00000576958 ZMYM6O95789 1325 aa14.14□□□□□ -0.15
PRPF8-215ENST00000576958 PDE4DQ08499 809 aa14.13□□□□□ -0.15
PRPF8-215ENST00000576958 GPNMBQ14956 572 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms