RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 SNX11Q9Y5W9 270 aa8.64□□□□□ -1.03
TOM1L1-222ENST00000575909 H3BS24 57 aa8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 ARNTLO00327 626 aa8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 MARCH6O60337 910 aa8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 S100BP04271 92 aaPredicted RBP8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 H2AFB1P0C5Y9 115 aa8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 H2AFB2P0C5Z0 115 aa8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 EXOSC10Q01780 885 aaKnown RBP8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 PCBP1Q15365 356 aaKnown RBP eCLIP8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 ZCCHC8Q6NZY4 707 aaKnown RBP8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 PKN3Q6P5Z2 889 aa8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 STRA8Q7Z7C7 330 aa8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 SLC51AQ86UW1 340 aa8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 CCDC103Q8IW40 242 aa8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 MMP19Q99542 508 aa8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 FOXP3Q9BZS1 431 aa8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 LRRC4CQ9HCJ2 640 aa8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 DUSP13Q9UII6 198 aa8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 TMEFF2Q9UIK5 374 aaPredicted RBP8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 PLAGL2Q9UPG8 496 aa8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 PCDHA8Q9Y5H6 950 aa8.63□□□□□ -1.03
TOM1L1-222ENST00000575909 TMEM265A0A087WTH1 108 aa8.62□□□□□ -1.03
TOM1L1-222ENST00000575909 NPHP3-ACAD11A0A0J9YXS1 232 aa8.62□□□□□ -1.03
TOM1L1-222ENST00000575909 WASH4PA8MWX3 477 aa8.62□□□□□ -1.03
TOM1L1-222ENST00000575909 ARVCFO00192 962 aa8.62□□□□□ -1.03
TOM1L1-222ENST00000575909 KPNA6O60684 536 aa8.62□□□□□ -1.03
TOM1L1-222ENST00000575909 EYA4O95677 639 aa8.62□□□□□ -1.03
TOM1L1-222ENST00000575909 EVA1CP58658 441 aa8.62□□□□□ -1.03
TOM1L1-222ENST00000575909 IFI16Q16666 785 aaKnown RBP8.62□□□□□ -1.03
TOM1L1-222ENST00000575909 CDCA2Q69YH5 1023 aaPredicted RBP8.62□□□□□ -1.03
TOM1L1-222ENST00000575909 LBX2Q6XYB7 198 aa8.62□□□□□ -1.03
TOM1L1-222ENST00000575909 DDX53Q86TM3 631 aaKnown RBP8.62□□□□□ -1.03
TOM1L1-222ENST00000575909 WNK4Q96J92 1243 aa8.62□□□□□ -1.03
TOM1L1-222ENST00000575909 ORAI3Q9BRQ5 295 aa8.62□□□□□ -1.03
TOM1L1-222ENST00000575909 SEMA3GQ9NS98 782 aa8.62□□□□□ -1.03
TOM1L1-222ENST00000575909 FGF10O15520 208 aaPredicted RBP8.61□□□□□ -1.03
TOM1L1-222ENST00000575909 FSTP19883 344 aa8.61□□□□□ -1.03
TOM1L1-222ENST00000575909 LTKP29376 864 aa8.61□□□□□ -1.03
TOM1L1-222ENST00000575909 PIK3R6Q5UE93 754 aa8.61□□□□□ -1.03
TOM1L1-222ENST00000575909 KIF18BQ86Y91 864 aa8.61□□□□□ -1.03
TOM1L1-222ENST00000575909 NETO1Q8TDF5 533 aa8.61□□□□□ -1.03
TOM1L1-222ENST00000575909 PTCHD1Q96NR3 888 aa8.61□□□□□ -1.03
TOM1L1-222ENST00000575909 ALG1Q9BT22 464 aa8.61□□□□□ -1.03
TOM1L1-222ENST00000575909 CDADC1Q9BWV3 514 aa8.61□□□□□ -1.03
TOM1L1-222ENST00000575909 AP5S1Q9NUS5 200 aa8.61□□□□□ -1.03
TOM1L1-222ENST00000575909 STK17AQ9UEE5 414 aa8.61□□□□□ -1.03
TOM1L1-222ENST00000575909 CYP26A1O43174 497 aa8.6□□□□□ -1.03
TOM1L1-222ENST00000575909 BRINP1O60477 761 aa8.6□□□□□ -1.03
TOM1L1-222ENST00000575909 TBC1D8O95759 1140 aa8.6□□□□□ -1.03
TOM1L1-222ENST00000575909 KCNA6P17658 529 aa8.6□□□□□ -1.03
TOM1L1-222ENST00000575909 KCNMA1Q12791 1236 aa8.6□□□□□ -1.03
TOM1L1-222ENST00000575909 STRN3Q13033 797 aa8.6□□□□□ -1.03
TOM1L1-222ENST00000575909 PAK1Q13153 545 aa8.6□□□□□ -1.03
TOM1L1-222ENST00000575909 KIZQ2M2Z5 673 aa8.6□□□□□ -1.03
TOM1L1-222ENST00000575909 BRDTQ58F21 947 aaPredicted RBP8.6□□□□□ -1.03
TOM1L1-222ENST00000575909 CYP2R1Q6VVX0 501 aa8.6□□□□□ -1.03
TOM1L1-222ENST00000575909 ZC3H7AQ8IWR0 971 aaKnown RBP8.6□□□□□ -1.03
TOM1L1-222ENST00000575909 RCBTB1Q8NDN9 531 aa8.6□□□□□ -1.03
TOM1L1-222ENST00000575909 SAMD15Q9P1V8 674 aa8.6□□□□□ -1.03
TOM1L1-222ENST00000575909 PCDHA11Q9Y5I1 949 aa8.6□□□□□ -1.03
TOM1L1-222ENST00000575909 PITPNM2Q9BZ72 1349 aa8.59□□□□□ -1.03
TOM1L1-222ENST00000575909 MSCO60682 206 aa8.59□□□□□ -1.03
TOM1L1-222ENST00000575909 FKTNO75072 461 aa8.59□□□□□ -1.03
TOM1L1-222ENST00000575909 LCP1P13796 627 aa8.59□□□□□ -1.03
TOM1L1-222ENST00000575909 RBM10P98175 930 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-222ENST00000575909 RASSF7Q02833 373 aa8.59□□□□□ -1.03
TOM1L1-222ENST00000575909 SEPT7Q16181 437 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-222ENST00000575909 CREG2Q8IUH2 290 aa8.59□□□□□ -1.03
TOM1L1-222ENST00000575909 PLD6Q8N2A8 252 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-222ENST00000575909 NAT16Q8N8M0 369 aa8.59□□□□□ -1.03
TOM1L1-222ENST00000575909 PIM2Q9P1W9 311 aa8.59□□□□□ -1.03
TOM1L1-222ENST00000575909 RNF219Q5W0B1 726 aaPredicted RBP8.58□□□□□ -1.04
TOM1L1-222ENST00000575909 ABHD17CQ6PCB6 329 aa8.58□□□□□ -1.04
TOM1L1-222ENST00000575909 NECAB2Q7Z6G3 386 aa8.58□□□□□ -1.04
TOM1L1-222ENST00000575909 OR2W6PQ8NHA6 318 aa8.58□□□□□ -1.04
TOM1L1-222ENST00000575909 PCDH19Q8TAB3 1148 aa8.58□□□□□ -1.04
TOM1L1-222ENST00000575909 WDR66Q8TBY9 1149 aa8.58□□□□□ -1.04
TOM1L1-222ENST00000575909 TTC1Q99614 292 aa8.58□□□□□ -1.04
TOM1L1-222ENST00000575909 TMEM82A0PJX8 343 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 WNT9AO14904 365 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 MYO1BO43795 1136 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 ZEB2O60315 1214 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 FOSL1P15407 271 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 SCNN1BP51168 640 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 GUCY2FP51841 1108 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 TEKQ02763 1124 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 EGR3Q06889 387 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 INF2Q27J81 1249 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 PLA2G4EQ3MJ16 856 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 ODR4Q5SWX8 454 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 ASB11Q8WXH4 323 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 USP7Q93009 1102 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 CELF4Q9BZC1 486 aaKnown RBP8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 IFT22Q9H7X7 185 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 ATP13A1Q9HD20 1204 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 PCDHA2Q9Y5H9 948 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 PHLDB1Q86UU1 1377 aa8.57□□□□□ -1.04
TOM1L1-222ENST00000575909 WASHC2CQ9Y4E1 1318 aa8.56□□□□□ -1.04
TOM1L1-222ENST00000575909 CBX4O00257 560 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms