RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 DUSP11O75319 330 aaKnown RBP15.73■□□□□ 0.11
CIITA-210ENST00000575513 RPS6KB1P23443 525 aa15.73■□□□□ 0.11
CIITA-210ENST00000575513 EDNRBP24530 442 aa15.73■□□□□ 0.11
CIITA-210ENST00000575513 CALML3P27482 149 aa15.73■□□□□ 0.11
CIITA-210ENST00000575513 ALDH5A1P51649 535 aaPredicted RBP15.73■□□□□ 0.11
CIITA-210ENST00000575513 FGD1P98174 961 aa15.73■□□□□ 0.11
CIITA-210ENST00000575513 CCDC144BQ3MJ40 725 aa15.73■□□□□ 0.11
CIITA-210ENST00000575513 IQSEC1Q6DN90 963 aa15.73■□□□□ 0.11
CIITA-210ENST00000575513 SLC30A10Q6XR72 485 aa15.73■□□□□ 0.11
CIITA-210ENST00000575513 HOMER1Q86YM7 354 aa15.73■□□□□ 0.11
CIITA-210ENST00000575513 SRBD1Q8N5C6 995 aaKnown RBP15.73■□□□□ 0.11
CIITA-210ENST00000575513 DIS3LQ8TF46 1054 aaKnown RBP15.73■□□□□ 0.11
CIITA-210ENST00000575513 ZSWIM6Q9HCJ5 1215 aa15.73■□□□□ 0.11
CIITA-210ENST00000575513 VTA1Q9NP79 307 aa15.73■□□□□ 0.11
CIITA-210ENST00000575513 ZHX1Q9UKY1 873 aaPredicted RBP15.73■□□□□ 0.11
CIITA-210ENST00000575513 BRPF3Q9ULD4 1205 aa15.73■□□□□ 0.11
CIITA-210ENST00000575513 PLXNA1Q9UIW2 1896 aa15.73■□□□□ 0.11
CIITA-210ENST00000575513 PDE4DIPQ5VU43 2346 aa15.73■□□□□ 0.11
CIITA-210ENST00000575513 ZBTB43O43298 467 aa15.72■□□□□ 0.11
CIITA-210ENST00000575513 HSD17B4P51659 736 aa15.72■□□□□ 0.11
CIITA-210ENST00000575513 ANAPC15P60006 121 aa15.72■□□□□ 0.11
CIITA-210ENST00000575513 NKX3-2P78367 333 aa15.72■□□□□ 0.11
CIITA-210ENST00000575513 TMTC3Q6ZXV5 915 aa15.72■□□□□ 0.11
CIITA-210ENST00000575513 RUFY3Q7L099 469 aa15.72■□□□□ 0.11
CIITA-210ENST00000575513 RNF180Q86T96 592 aa15.72■□□□□ 0.11
CIITA-210ENST00000575513 MICU3Q86XE3 530 aa15.72■□□□□ 0.11
CIITA-210ENST00000575513 SYTL5Q8TDW5 730 aaPredicted RBP15.72■□□□□ 0.11
CIITA-210ENST00000575513 NSUN6Q8TEA1 469 aaKnown RBP15.72■□□□□ 0.11
CIITA-210ENST00000575513 TCEANC2Q96MN5 208 aa15.72■□□□□ 0.11
CIITA-210ENST00000575513 PURBQ96QR8 312 aaKnown RBP15.72■□□□□ 0.11
CIITA-210ENST00000575513 IWS1Q96ST2 819 aa15.72■□□□□ 0.11
CIITA-210ENST00000575513 XPNPEP3Q9NQH7 507 aa15.72■□□□□ 0.11
CIITA-210ENST00000575513 SEC63Q9UGP8 760 aaKnown RBP15.72■□□□□ 0.11
CIITA-210ENST00000575513 Q9Y3F1 56 aa15.72■□□□□ 0.11
CIITA-210ENST00000575513 SMCHD1A6NHR9 2005 aa15.72■□□□□ 0.11
CIITA-210ENST00000575513 CCDC196A0A1B0GTZ2 297 aa15.71■□□□□ 0.11
CIITA-210ENST00000575513 KBTBD13C9JR72 458 aa15.71■□□□□ 0.11
CIITA-210ENST00000575513 OPLAHO14841 1288 aa15.71■□□□□ 0.11
CIITA-210ENST00000575513 PLEKHA8P1O95397 391 aa15.71■□□□□ 0.11
CIITA-210ENST00000575513 CASTP20810 708 aaKnown RBP15.71■□□□□ 0.11
CIITA-210ENST00000575513 EVCP57679 992 aa15.71■□□□□ 0.11
CIITA-210ENST00000575513 LRRC41Q15345 812 aa15.71■□□□□ 0.11
CIITA-210ENST00000575513 PRPF38BQ5VTL8 546 aaKnown RBP15.71■□□□□ 0.11
CIITA-210ENST00000575513 TAPT1Q6NXT6 567 aa15.71■□□□□ 0.11
CIITA-210ENST00000575513 Q6ZUG5 572 aa15.71■□□□□ 0.11
CIITA-210ENST00000575513 TEX2Q8IWB9 1127 aa15.71■□□□□ 0.11
CIITA-210ENST00000575513 TBC1D5Q92609 795 aa15.71■□□□□ 0.11
CIITA-210ENST00000575513 DPF3Q92784 378 aa15.71■□□□□ 0.11
CIITA-210ENST00000575513 TSEN34Q9BSV6 310 aaKnown RBP15.71■□□□□ 0.11
CIITA-210ENST00000575513 CYP46A1Q9Y6A2 500 aa15.71■□□□□ 0.11
CIITA-210ENST00000575513 KLF18A0A0U1RQI7 1052 aa15.7■□□□□ 0.1
CIITA-210ENST00000575513 RBM47A0AV96 593 aaKnown RBP15.7■□□□□ 0.1
CIITA-210ENST00000575513 ADAMTS4O75173 837 aa15.7■□□□□ 0.1
CIITA-210ENST00000575513 CFBP00751 764 aa15.7■□□□□ 0.1
CIITA-210ENST00000575513 RXRAP19793 462 aa15.7■□□□□ 0.1
CIITA-210ENST00000575513 CST5P28325 142 aaPredicted RBP15.7■□□□□ 0.1
CIITA-210ENST00000575513 GJA9P57773 515 aa15.7■□□□□ 0.1
CIITA-210ENST00000575513 TNFAIP2Q03169 654 aa15.7■□□□□ 0.1
CIITA-210ENST00000575513 PDE4DQ08499 809 aa15.7■□□□□ 0.1
CIITA-210ENST00000575513 RTN1Q16799 776 aa15.7■□□□□ 0.1
CIITA-210ENST00000575513 ANO1Q5XXA6 986 aa15.7■□□□□ 0.1
CIITA-210ENST00000575513 KLHDC9Q8NEP7 349 aa15.7■□□□□ 0.1
CIITA-210ENST00000575513 IL17RAQ96F46 866 aa15.7■□□□□ 0.1
CIITA-210ENST00000575513 RMDN3Q96TC7 470 aa15.7■□□□□ 0.1
CIITA-210ENST00000575513 UPF3AQ9H1J1 476 aaKnown RBP15.7■□□□□ 0.1
CIITA-210ENST00000575513 SPC25Q9HBM1 224 aa15.7■□□□□ 0.1
CIITA-210ENST00000575513 NR2E3Q9Y5X4 410 aa15.7■□□□□ 0.1
CIITA-210ENST00000575513 GCOM1H8Y6P7 765 aaPredicted RBP15.69■□□□□ 0.1
CIITA-210ENST00000575513 POLR2MP0CAP2 368 aa15.69■□□□□ 0.1
CIITA-210ENST00000575513 CPA1P15085 419 aa15.69■□□□□ 0.1
CIITA-210ENST00000575513 FUT2Q10981 343 aa15.69■□□□□ 0.1
CIITA-210ENST00000575513 GJC2Q5T442 439 aaPredicted RBP15.69■□□□□ 0.1
CIITA-210ENST00000575513 BRF1Q92994 677 aa15.69■□□□□ 0.1
CIITA-210ENST00000575513 TAAR1Q96RJ0 339 aa15.69■□□□□ 0.1
CIITA-210ENST00000575513 COL20A1Q9P218 1284 aa15.69■□□□□ 0.1
CIITA-210ENST00000575513 PHF24Q9UPV7 400 aa15.69■□□□□ 0.1
CIITA-210ENST00000575513 GNEQ9Y223 722 aaKnown RBP15.69■□□□□ 0.1
CIITA-210ENST00000575513 NID2Q14112 1375 aa15.68■□□□□ 0.1
CIITA-210ENST00000575513 MOXD2PA6NHM9 499 aa15.68■□□□□ 0.1
CIITA-210ENST00000575513 GOLGA8AA7E2F4 631 aa15.68■□□□□ 0.1
CIITA-210ENST00000575513 GOLGA8BA8MQT2 603 aa15.68■□□□□ 0.1
CIITA-210ENST00000575513 PIK3CDO00329 1044 aa15.68■□□□□ 0.1
CIITA-210ENST00000575513 EVI5O60447 810 aa15.68■□□□□ 0.1
CIITA-210ENST00000575513 PGK1P00558 417 aa15.68■□□□□ 0.1
CIITA-210ENST00000575513 STXBP2Q15833 593 aa15.68■□□□□ 0.1
CIITA-210ENST00000575513 C1orf53Q5VUE5 145 aa15.68■□□□□ 0.1
CIITA-210ENST00000575513 CCSAPQ6IQ19 270 aaPredicted RBP15.68■□□□□ 0.1
CIITA-210ENST00000575513 CMTR1Q8N1G2 835 aaKnown RBP15.68■□□□□ 0.1
CIITA-210ENST00000575513 PCSK9Q8NBP7 692 aaKnown RBP15.68■□□□□ 0.1
CIITA-210ENST00000575513 SENP6Q9GZR1 1112 aaPredicted RBP15.68■□□□□ 0.1
CIITA-210ENST00000575513 ALDH8A1Q9H2A2 487 aaPredicted RBP15.68■□□□□ 0.1
CIITA-210ENST00000575513 FAM217BQ9NTX9 383 aaPredicted RBP15.68■□□□□ 0.1
CIITA-210ENST00000575513 SYNRGQ9UMZ2 1314 aa15.68■□□□□ 0.1
CIITA-210ENST00000575513 hCG_1984214I3L0E3 225 aa15.67■□□□□ 0.1
CIITA-210ENST00000575513 NKRFO15226 690 aaKnown RBP eCLIP15.67■□□□□ 0.1
CIITA-210ENST00000575513 ADCY6O43306 1168 aa15.67■□□□□ 0.1
CIITA-210ENST00000575513 EIF3JO75822 258 aaKnown RBP15.67■□□□□ 0.1
CIITA-210ENST00000575513 SMPD1P17405 629 aa15.67■□□□□ 0.1
CIITA-210ENST00000575513 ADCYAP1R1P41586 468 aa15.67■□□□□ 0.1
CIITA-210ENST00000575513 METAP2P50579 478 aaKnown RBP eCLIP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms