RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 ADD3Q9UEY8 706 aaKnown RBP19.93■□□□□ 0.78
LITAF-212ENST00000573332 NRBP1Q9UHY1 535 aa19.93■□□□□ 0.78
LITAF-212ENST00000573332 LIMCH1Q9UPQ0 1083 aa19.93■□□□□ 0.78
LITAF-212ENST00000573332 SYNGAP1Q96PV0 1343 aa19.93■□□□□ 0.78
LITAF-212ENST00000573332 HTTP42858 3142 aa19.93■□□□□ 0.78
LITAF-212ENST00000573332 hCG_1642624A0A1W2PR95 340 aa19.92■□□□□ 0.78
LITAF-212ENST00000573332 CPLX1O14810 134 aa19.92■□□□□ 0.78
LITAF-212ENST00000573332 CACNB2Q08289 660 aaPredicted RBP19.92■□□□□ 0.78
LITAF-212ENST00000573332 TRIM32Q13049 653 aa19.92■□□□□ 0.78
LITAF-212ENST00000573332 PFKFB3Q16875 520 aaPredicted RBP19.92■□□□□ 0.78
LITAF-212ENST00000573332 SLC30A10Q6XR72 485 aa19.92■□□□□ 0.78
LITAF-212ENST00000573332 DNERQ8NFT8 737 aa19.92■□□□□ 0.78
LITAF-212ENST00000573332 SYTL5Q8TDW5 730 aaPredicted RBP19.92■□□□□ 0.78
LITAF-212ENST00000573332 RPTORQ8N122 1335 aa19.92■□□□□ 0.78
LITAF-212ENST00000573332 ASB14A6NK59 587 aa19.91■□□□□ 0.78
LITAF-212ENST00000573332 ST18O60284 1047 aa19.91■□□□□ 0.78
LITAF-212ENST00000573332 CALML3P27482 149 aa19.91■□□□□ 0.78
LITAF-212ENST00000573332 CYP2C19P33261 490 aa19.91■□□□□ 0.78
LITAF-212ENST00000573332 PKN1Q16512 942 aa19.91■□□□□ 0.78
LITAF-212ENST00000573332 PPP1R18Q6NYC8 613 aa19.91■□□□□ 0.78
LITAF-212ENST00000573332 MORC4Q8TE76 937 aa19.91■□□□□ 0.78
LITAF-212ENST00000573332 PHKBQ93100 1093 aa19.91■□□□□ 0.78
LITAF-212ENST00000573332 ZSCAN31Q96LW9 406 aaPredicted RBP19.91■□□□□ 0.78
LITAF-212ENST00000573332 BARHL2Q9NY43 387 aa19.91■□□□□ 0.78
LITAF-212ENST00000573332 ASTN1O14525 1302 aa19.91■□□□□ 0.78
LITAF-212ENST00000573332 SMCHD1A6NHR9 2005 aa19.9■□□□□ 0.78
LITAF-212ENST00000573332 GCOM1H8Y6P7 765 aaPredicted RBP19.9■□□□□ 0.78
LITAF-212ENST00000573332 CDKL5O76039 1030 aa19.9■□□□□ 0.78
LITAF-212ENST00000573332 LARGE1O95461 756 aa19.9■□□□□ 0.78
LITAF-212ENST00000573332 CFBP00751 764 aa19.9■□□□□ 0.78
LITAF-212ENST00000573332 POLR2MP0CAP2 368 aa19.9■□□□□ 0.78
LITAF-212ENST00000573332 SCG2P13521 617 aa19.9■□□□□ 0.78
LITAF-212ENST00000573332 PRKAR2AP13861 404 aaKnown RBP19.9■□□□□ 0.78
LITAF-212ENST00000573332 AKAP17AQ02040 695 aaKnown RBP19.9■□□□□ 0.78
LITAF-212ENST00000573332 MTFR1Q15390 333 aa19.9■□□□□ 0.78
LITAF-212ENST00000573332 WWC2Q6AWC2 1192 aa19.9■□□□□ 0.78
LITAF-212ENST00000573332 TRIM22Q8IYM9 498 aa19.9■□□□□ 0.78
LITAF-212ENST00000573332 GTF3C6Q969F1 213 aa19.9■□□□□ 0.78
LITAF-212ENST00000573332 HMX1Q9NP08 348 aaPredicted RBP19.9■□□□□ 0.78
LITAF-212ENST00000573332 BAZ2BQ9UIF8 2168 aaKnown RBP19.9■□□□□ 0.78
LITAF-212ENST00000573332 PIK3CDO00329 1044 aa19.89■□□□□ 0.77
LITAF-212ENST00000573332 SNAI1O95863 264 aaPredicted RBP19.89■□□□□ 0.77
LITAF-212ENST00000573332 CYBAP13498 195 aa19.89■□□□□ 0.77
LITAF-212ENST00000573332 CCL5P13501 91 aa19.89■□□□□ 0.77
LITAF-212ENST00000573332 ALDH5A1P51649 535 aaPredicted RBP19.89■□□□□ 0.77
LITAF-212ENST00000573332 SSRP1Q08945 709 aaKnown RBP19.89■□□□□ 0.77
LITAF-212ENST00000573332 NOL8Q76FK4 1167 aaKnown RBP19.89■□□□□ 0.77
LITAF-212ENST00000573332 HEATR3Q7Z4Q2 680 aa19.89■□□□□ 0.77
LITAF-212ENST00000573332 GPKOWQ92917 476 aaPredicted RBP eCLIP19.89■□□□□ 0.77
LITAF-212ENST00000573332 PURBQ96QR8 312 aaKnown RBP19.89■□□□□ 0.77
LITAF-212ENST00000573332 SLC26A6Q9BXS9 759 aa19.89■□□□□ 0.77
LITAF-212ENST00000573332 PAK6Q9NQU5 681 aaPredicted RBP19.89■□□□□ 0.77
LITAF-212ENST00000573332 COL20A1Q9P218 1284 aa19.89■□□□□ 0.77
LITAF-212ENST00000573332 ZNFX1Q9P2E3 1918 aaKnown RBP19.88■□□□□ 0.77
LITAF-212ENST00000573332 STXBP3O00186 592 aa19.88■□□□□ 0.77
LITAF-212ENST00000573332 DEXIO95424 95 aa19.88■□□□□ 0.77
LITAF-212ENST00000573332 CAPN2P17655 700 aa19.88■□□□□ 0.77
LITAF-212ENST00000573332 EDNRBP24530 442 aa19.88■□□□□ 0.77
LITAF-212ENST00000573332 TYW1BQ6NUM6 668 aa19.88■□□□□ 0.77
LITAF-212ENST00000573332 ARMCX2Q7L311 632 aa19.88■□□□□ 0.77
LITAF-212ENST00000573332 TAAR1Q96RJ0 339 aa19.88■□□□□ 0.77
LITAF-212ENST00000573332 UNC93B1Q9H1C4 597 aa19.88■□□□□ 0.77
LITAF-212ENST00000573332 ABHD16BQ9H3Z7 469 aa19.88■□□□□ 0.77
LITAF-212ENST00000573332 PSTPIP2Q9H939 334 aa19.88■□□□□ 0.77
LITAF-212ENST00000573332 SH2B1Q9NRF2 756 aaPredicted RBP19.88■□□□□ 0.77
LITAF-212ENST00000573332 STK36Q9NRP7 1315 aa19.87■□□□□ 0.77
LITAF-212ENST00000573332 B4DLN1 442 aa19.87■□□□□ 0.77
LITAF-212ENST00000573332 MEIS2O14770 477 aa19.87■□□□□ 0.77
LITAF-212ENST00000573332 CTDNEP1O95476 244 aa19.87■□□□□ 0.77
LITAF-212ENST00000573332 GJB1P08034 283 aa19.87■□□□□ 0.77
LITAF-212ENST00000573332 MCM2P49736 904 aa19.87■□□□□ 0.77
LITAF-212ENST00000573332 MRPL12P52815 198 aaKnown RBP19.87■□□□□ 0.77
LITAF-212ENST00000573332 NAPAP54920 295 aa19.87■□□□□ 0.77
LITAF-212ENST00000573332 FAM177A1Q8N128 213 aaPredicted RBP19.87■□□□□ 0.77
LITAF-212ENST00000573332 NECAB1Q8N987 351 aa19.87■□□□□ 0.77
LITAF-212ENST00000573332 TRPV1Q8NER1 839 aa19.87■□□□□ 0.77
LITAF-212ENST00000573332 NSUN6Q8TEA1 469 aaKnown RBP19.87■□□□□ 0.77
LITAF-212ENST00000573332 IWS1Q96ST2 819 aa19.87■□□□□ 0.77
LITAF-212ENST00000573332 MPHOSPH6Q99547 160 aaKnown RBP19.87■□□□□ 0.77
LITAF-212ENST00000573332 TMEM106CQ9BVX2 250 aa19.87■□□□□ 0.77
LITAF-212ENST00000573332 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.87■□□□□ 0.773e-7■■□□□ 13.1
LITAF-212ENST00000573332 RNF208Q9H0X6 261 aa19.87■□□□□ 0.77
LITAF-212ENST00000573332 GLT8D2Q9H1C3 349 aa19.87■□□□□ 0.77
LITAF-212ENST00000573332 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.87■□□□□ 0.77
LITAF-212ENST00000573332 CNPY2Q9Y2B0 182 aa19.87■□□□□ 0.77
LITAF-212ENST00000573332 ESYT2A0FGR8 921 aa19.86■□□□□ 0.77
LITAF-212ENST00000573332 ZNF865P0CJ78 1059 aaPredicted RBP19.86■□□□□ 0.77
LITAF-212ENST00000573332 CCDC12Q8WUD4 166 aaPredicted RBP19.86■□□□□ 0.77
LITAF-212ENST00000573332 CUL5Q93034 780 aa19.86■□□□□ 0.77
LITAF-212ENST00000573332 RMDN3Q96TC7 470 aa19.86■□□□□ 0.77
LITAF-212ENST00000573332 KATNBL1Q9H079 304 aa19.86■□□□□ 0.77
LITAF-212ENST00000573332 RIC8AQ9NPQ8 531 aa19.86■□□□□ 0.77
LITAF-212ENST00000573332 SH3GLB2Q9NR46 395 aa19.86■□□□□ 0.77
LITAF-212ENST00000573332 MYH6P13533 1939 aa19.85■□□□□ 0.77
LITAF-212ENST00000573332 CCND3P30281 292 aaPredicted RBP19.85■□□□□ 0.77
LITAF-212ENST00000573332 HOXA13P31271 388 aaPredicted RBP19.85■□□□□ 0.77
LITAF-212ENST00000573332 ST3GAL1Q11201 340 aa19.85■□□□□ 0.77
LITAF-212ENST00000573332 ACVR2BQ13705 512 aa19.85■□□□□ 0.77
LITAF-212ENST00000573332 PRAMEF19Q5SWL8 479 aa19.85■□□□□ 0.77
LITAF-212ENST00000573332 ZMYND12Q9H0C1 365 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms